Click here to switch to the map view.

The map label for this gene is ylbK [H]

Identifier: 150010339

GI number: 150010339

Start: 4601137

End: 4601973

Strand: Direct

Name: ylbK [H]

Synonym: BDI_3773

Alternate gene names: 150010339

Gene position: 4601137-4601973 (Clockwise)

Preceding gene: 150010336

Following gene: 150010340

Centisome position: 95.63

GC content: 46.95

Gene sequence:

>837_bases
ATGGCAGAAGAGACAAACCATAAACCCTATAGGTTGGGCTTGGCGCTTAGCGGAGGCGGAGCGAAAGGTTTTGCGCATAT
CGGCGTATTTCGAATGATGGAAGAATGTGCGCTAAGACCGGATATTATAGTCGGTACCAGTGCGGGAGCTTTAATGGGCG
CTTTGTTTGCTGATGGTTATTCGGCGGCGGAGATCCAAGAGCTTTTTACCGGACGTGAGTTCTCGGAATTCGCCCAGTTG
CAGATTCCTAAGGCGGGTTTGTTCGATAGTAAGCGCTTTCGTTATTTCTTGAGGCGACACTTGCGGACCAAGAACATCGA
GGACTTGCAAATTCCGCTGGTGGTTGTCGCGACTGATTTGGATAATGGCGAAAGCCATGAATTTAGGAGTGGTCCTATTG
TTGAGGCGGTGACAGCTTCTTGTAGTATCCCGATTATTTTCAGTCCTGTAGTCATCAATGGCGTTCATTATGTGGATGGA
GGATTATTTCACAACTTTCCGGTCTCCATCATCCGTGAGGAATGTGAGCGTATTATCGGGGTGAACGTAAGCCCGTTGAT
CCCGCAAAAATATAAGCAGACCATATTCCATATCGCCGAGCGCTCTTATCATTATATGTTCCGGGCAAATACGCTGGAGG
ATCGAGAGATGTGTGATGTCTTAATAGAAGCGGAGGAGTTTGGCTTATATAAGACATTCGATCTTGAGAATGTAGACGTG
ATTTGTAATATTGGCTATTCCGCCGCTGCCCGTTGCTTTGAGAAAGTGTTGGATGAGAATAAATATGAAACCTTGGTGAA
AGCGATCGCGGCAAGAAAGAAAGGCCTGATGCCGTGA

Upstream 100 bases:

>100_bases
GTAGCAAAAATAAAAGAGGATGGAAACTTTTTCCCTAATAATAATGTTTCTAATTAAAAAAAACAGCATATTTGTTACCA
GATTAAGAGACAAGAAATAA

Downstream 100 bases:

>100_bases
CAAATCGTCTGTCTGGACAAAGCGCTTTCCCACAAAAACTTTATATATAGATGAACGCAATGGAACAAAAAAACAAGATG
GTAATTTATCAGGTATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MAEETNHKPYRLGLALSGGGAKGFAHIGVFRMMEECALRPDIIVGTSAGALMGALFADGYSAAEIQELFTGREFSEFAQL
QIPKAGLFDSKRFRYFLRRHLRTKNIEDLQIPLVVVATDLDNGESHEFRSGPIVEAVTASCSIPIIFSPVVINGVHYVDG
GLFHNFPVSIIREECERIIGVNVSPLIPQKYKQTIFHIAERSYHYMFRANTLEDREMCDVLIEAEEFGLYKTFDLENVDV
ICNIGYSAAARCFEKVLDENKYETLVKAIAARKKGLMP

Sequences:

>Translated_278_residues
MAEETNHKPYRLGLALSGGGAKGFAHIGVFRMMEECALRPDIIVGTSAGALMGALFADGYSAAEIQELFTGREFSEFAQL
QIPKAGLFDSKRFRYFLRRHLRTKNIEDLQIPLVVVATDLDNGESHEFRSGPIVEAVTASCSIPIIFSPVVINGVHYVDG
GLFHNFPVSIIREECERIIGVNVSPLIPQKYKQTIFHIAERSYHYMFRANTLEDREMCDVLIEAEEFGLYKTFDLENVDV
ICNIGYSAAARCFEKVLDENKYETLVKAIAARKKGLMP
>Mature_277_residues
AEETNHKPYRLGLALSGGGAKGFAHIGVFRMMEECALRPDIIVGTSAGALMGALFADGYSAAEIQELFTGREFSEFAQLQ
IPKAGLFDSKRFRYFLRRHLRTKNIEDLQIPLVVVATDLDNGESHEFRSGPIVEAVTASCSIPIIFSPVVINGVHYVDGG
LFHNFPVSIIREECERIIGVNVSPLIPQKYKQTIFHIAERSYHYMFRANTLEDREMCDVLIEAEEFGLYKTFDLENVDVI
CNIGYSAAARCFEKVLDENKYETLVKAIAARKKGLMP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=30.0546448087432, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=30.0546448087432, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=30.0546448087432, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=30.0546448087432, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=30.0546448087432, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI148727335, Length=279, Percent_Identity=23.2974910394265, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI148727290, Length=279, Percent_Identity=23.2974910394265, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI226510936, Length=167, Percent_Identity=33.5329341317365, Blast_Score=93, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193204778, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=181, Percent_Identity=31.4917127071823, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31136; Mature: 31005

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEETNHKPYRLGLALSGGGAKGFAHIGVFRMMEECALRPDIIVGTSAGALMGALFADGY
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC
SAAEIQELFTGREFSEFAQLQIPKAGLFDSKRFRYFLRRHLRTKNIEDLQIPLVVVATDL
CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECC
DNGESHEFRSGPIVEAVTASCSIPIIFSPVVINGVHYVDGGLFHNFPVSIIREECERIIG
CCCCCCCCCCCCHHHHHHCCCCCCEEECHHHHCCEEEECCCEECCCCHHHHHHHHHHHHC
VNVSPLIPQKYKQTIFHIAERSYHYMFRANTLEDREMCDVLIEAEEFGLYKTFDLENVDV
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCEE
ICNIGYSAAARCFEKVLDENKYETLVKAIAARKKGLMP
EEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEETNHKPYRLGLALSGGGAKGFAHIGVFRMMEECALRPDIIVGTSAGALMGALFADGY
CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC
SAAEIQELFTGREFSEFAQLQIPKAGLFDSKRFRYFLRRHLRTKNIEDLQIPLVVVATDL
CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECC
DNGESHEFRSGPIVEAVTASCSIPIIFSPVVINGVHYVDGGLFHNFPVSIIREECERIIG
CCCCCCCCCCCCHHHHHHCCCCCCEEECHHHHCCEEEECCCEECCCCHHHHHHHHHHHHC
VNVSPLIPQKYKQTIFHIAERSYHYMFRANTLEDREMCDVLIEAEEFGLYKTFDLENVDV
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCEE
ICNIGYSAAARCFEKVLDENKYETLVKAIAARKKGLMP
EEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]