| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010336
Identifier: 150010336
GI number: 150010336
Start: 4595436
End: 4596320
Strand: Direct
Name: 150010336
Synonym: BDI_3770
Alternate gene names: NA
Gene position: 4595436-4596320 (Clockwise)
Preceding gene: 150010333
Following gene: 150010339
Centisome position: 95.51
GC content: 48.59
Gene sequence:
>885_bases ATGATAACGAGACGGAATTTTTTGAAAGCGGGTGCCGCTGTGGCTGCGCTGAGTGTAGTACCGAATGGCTTTGCCTCTAT CTTGGCTAAGAAAGAGAAAGCGATAGGAGTACAGTTGTATAGTGTCCGGGACGACTTGAAGACGGATTTTGACGGTACGA TGAAGGCTTTGGTGGATATCGGTTATAAACGGATGGAAGCCGCCGGTTACCGGGATGGCAAATTCTACGGGAAATCCCCG GCCGAGATGAAGAAATATCTGGCGGATCTGGGTGCCCGTATGGTAGGTTCCCATACCGGAAGCGGTTTGCTGGCGGAGGG TGATACCAAGGGATGGGACTTCTGGAAAAAGAATGCCGCTGATACGGCAGAGGTAGGCTGTAAATGGATTGTTCAGGCGG GTTATCCCTCCAAAGATATCAAGAGCCTTTCGGACGTGAAGCGTTTAGCGGATCAATTTAATAAATGTGGTGAGATCGCA AAGGCGAACGGGTTGCGTTTCGCTTTCCATAACCATGTGGATGAATTCCATGAGTTGGAAGGAAAGATCCCGTTCGACGT GATGATCGAGAATACGGACAAAGGGCTGGTTACTTTCCAGATCGATACGGCTCAATTAGTGTATGGCGGTTTTAAATGTC ATGATTACGTGAACCGTTATCCCGGTCGTTTCGCCAACTGGCACTTGAAAGACGCGAATGCGGATGGAAAGGGCAGCACG GAGATGGGCGCCGGAATCGTAGACTTCAAATCCTTATTCGCTGTGGCGGAGAAAGCCGGATTAGAGGATTACTTCATTGA GCAAGAGCGTTATAATATGACACCGCTGCAAGCGATGAAACATGATTATGACTTCTTGATGAATGCCTCTTATGTGAAGT GGTAA
Upstream 100 bases:
>100_bases GTCAGATTTTTTGTTCCTTGCATGATCGTTTGTTTAAATGTGCGCGAAAGTAGAAATAATTTTGCTACCTTTAGCGCCGT TAATCTTAAAGAATAGTATG
Downstream 100 bases:
>100_bases ACGGGAGTATAGGCGTAGCCTTATGCCAGTATCGGTGTAAGGCTACGCCTATATCAGCGTGAGGCTATGCCGATACTGGC GCAAGGCAACGCCAGTACTG
Product: sugar phosphate isomerase/epimerase
Products: NA
Alternate protein names: Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Sugar Phosphate Isomerase/Epimerase Family Protein; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase Family Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MITRRNFLKAGAAVAALSVVPNGFASILAKKEKAIGVQLYSVRDDLKTDFDGTMKALVDIGYKRMEAAGYRDGKFYGKSP AEMKKYLADLGARMVGSHTGSGLLAEGDTKGWDFWKKNAADTAEVGCKWIVQAGYPSKDIKSLSDVKRLADQFNKCGEIA KANGLRFAFHNHVDEFHELEGKIPFDVMIENTDKGLVTFQIDTAQLVYGGFKCHDYVNRYPGRFANWHLKDANADGKGST EMGAGIVDFKSLFAVAEKAGLEDYFIEQERYNMTPLQAMKHDYDFLMNASYVKW
Sequences:
>Translated_294_residues MITRRNFLKAGAAVAALSVVPNGFASILAKKEKAIGVQLYSVRDDLKTDFDGTMKALVDIGYKRMEAAGYRDGKFYGKSP AEMKKYLADLGARMVGSHTGSGLLAEGDTKGWDFWKKNAADTAEVGCKWIVQAGYPSKDIKSLSDVKRLADQFNKCGEIA KANGLRFAFHNHVDEFHELEGKIPFDVMIENTDKGLVTFQIDTAQLVYGGFKCHDYVNRYPGRFANWHLKDANADGKGST EMGAGIVDFKSLFAVAEKAGLEDYFIEQERYNMTPLQAMKHDYDFLMNASYVKW >Mature_294_residues MITRRNFLKAGAAVAALSVVPNGFASILAKKEKAIGVQLYSVRDDLKTDFDGTMKALVDIGYKRMEAAGYRDGKFYGKSP AEMKKYLADLGARMVGSHTGSGLLAEGDTKGWDFWKKNAADTAEVGCKWIVQAGYPSKDIKSLSDVKRLADQFNKCGEIA KANGLRFAFHNHVDEFHELEGKIPFDVMIENTDKGLVTFQIDTAQLVYGGFKCHDYVNRYPGRFANWHLKDANADGKGST EMGAGIVDFKSLFAVAEKAGLEDYFIEQERYNMTPLQAMKHDYDFLMNASYVKW
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32756; Mature: 32756
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRRNFLKAGAAVAALSVVPNGFASILAKKEKAIGVQLYSVRDDLKTDFDGTMKALVDI CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEHHHHHHCCHHHHHHHHHHH GYKRMEAAGYRDGKFYGKSPAEMKKYLADLGARMVGSHTGSGLLAEGDTKGWDFWKKNAA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC DTAEVGCKWIVQAGYPSKDIKSLSDVKRLADQFNKCGEIAKANGLRFAFHNHVDEFHELE CHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC GKIPFDVMIENTDKGLVTFQIDTAQLVYGGFKCHDYVNRYPGRFANWHLKDANADGKGST CCCCEEEEEECCCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCH EMGAGIVDFKSLFAVAEKAGLEDYFIEQERYNMTPLQAMKHDYDFLMNASYVKW HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MITRRNFLKAGAAVAALSVVPNGFASILAKKEKAIGVQLYSVRDDLKTDFDGTMKALVDI CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEHHHHHHCCHHHHHHHHHHH GYKRMEAAGYRDGKFYGKSPAEMKKYLADLGARMVGSHTGSGLLAEGDTKGWDFWKKNAA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC DTAEVGCKWIVQAGYPSKDIKSLSDVKRLADQFNKCGEIAKANGLRFAFHNHVDEFHELE CHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC GKIPFDVMIENTDKGLVTFQIDTAQLVYGGFKCHDYVNRYPGRFANWHLKDANADGKGST CCCCEEEEEECCCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCH EMGAGIVDFKSLFAVAEKAGLEDYFIEQERYNMTPLQAMKHDYDFLMNASYVKW HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA