| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010291
Identifier: 150010291
GI number: 150010291
Start: 4541738
End: 4542175
Strand: Direct
Name: 150010291
Synonym: BDI_3721
Alternate gene names: NA
Gene position: 4541738-4542175 (Clockwise)
Preceding gene: 150010286
Following gene: 150010292
Centisome position: 94.4
GC content: 44.29
Gene sequence:
>438_bases ATGTCAGCATTTTACAAATTTCTTTTTCCAATGAAGCCGGATGGTACAGCTATATCGTTACTGTTGTTGGCGCTTCGTTT GTTATTTGGAGGTCTATTGCTTTCGCATGGGATACAGAAGTGGACGAATTTTGAGAGCATGTCCGCCGCATTTCCGGACC CACTGGGAGTTGGACATTCGGTTTCTCTAGGCTTGGCCATTTTTGGGGAGCTTTTTTGTTCGATTGGCTTTATTCTCGGT GCGCTCTATCGGTTGGCAATGATCCCGATGATTTTTACTATGGGAGTGGCTTTCTTCGTGATTCACGGGAATGATCCGTT TTCTTTGAAAGAGTTGGCGTTCGTTTACTTGGTCATTTTTATCTTGATGTATATAGCAGGACCTGGTAAGTTCTCGTTAG ATCGTCTGATCGCTGTCCTCTTGTCGCAGAAGAGATAG
Upstream 100 bases:
>100_bases AGCCGCTTGTCAATTTCCGGAGCTTTTGCTGAACTAACCTTACTTCGTTTTTGTTTTATTACCAGAAAGATGAATTGATA AGATAAAAAATAGGGGAATT
Downstream 100 bases:
>100_bases GGAATTGTAGGGAAGTTAACTTGCTTTGGAAAAGTTTCTGGAACCTCGGGTAAACTCTCTGGTTCCTAAATAAAAAAAGA CTGTCTGGAAGCCAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Subfamily; Doxx Family Protein; DoxX Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSAFYKFLFPMKPDGTAISLLLLALRLLFGGLLLSHGIQKWTNFESMSAAFPDPLGVGHSVSLGLAIFGELFCSIGFILG ALYRLAMIPMIFTMGVAFFVIHGNDPFSLKELAFVYLVIFILMYIAGPGKFSLDRLIAVLLSQKR
Sequences:
>Translated_145_residues MSAFYKFLFPMKPDGTAISLLLLALRLLFGGLLLSHGIQKWTNFESMSAAFPDPLGVGHSVSLGLAIFGELFCSIGFILG ALYRLAMIPMIFTMGVAFFVIHGNDPFSLKELAFVYLVIFILMYIAGPGKFSLDRLIAVLLSQKR >Mature_144_residues SAFYKFLFPMKPDGTAISLLLLALRLLFGGLLLSHGIQKWTNFESMSAAFPDPLGVGHSVSLGLAIFGELFCSIGFILGA LYRLAMIPMIFTMGVAFFVIHGNDPFSLKELAFVYLVIFILMYIAGPGKFSLDRLIAVLLSQKR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15958; Mature: 15826
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFYKFLFPMKPDGTAISLLLLALRLLFGGLLLSHGIQKWTNFESMSAAFPDPLGVGHS CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCH VSLGLAIFGELFCSIGFILGALYRLAMIPMIFTMGVAFFVIHGNDPFSLKELAFVYLVIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH ILMYIAGPGKFSLDRLIAVLLSQKR HHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SAFYKFLFPMKPDGTAISLLLLALRLLFGGLLLSHGIQKWTNFESMSAAFPDPLGVGHS CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCH VSLGLAIFGELFCSIGFILGALYRLAMIPMIFTMGVAFFVIHGNDPFSLKELAFVYLVIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH ILMYIAGPGKFSLDRLIAVLLSQKR HHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA