| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010210
Identifier: 150010210
GI number: 150010210
Start: 4444257
End: 4445108
Strand: Direct
Name: 150010210
Synonym: BDI_3633
Alternate gene names: NA
Gene position: 4444257-4445108 (Clockwise)
Preceding gene: 150010209
Following gene: 150010211
Centisome position: 92.37
GC content: 38.85
Gene sequence:
>852_bases ATGAAAATTCTGACGTTTGATATAGAGGATTGGTGGGGGTACGATTATTATAAGTTAGGGGATAGGTCGGATTGGGAACC ACGTTTGGATAAATACCTTCGGGTAGTATTGGATTTATTGGATGGAAGAGGAATCAAAGCGACTTTCTTTATTTTGGGAG AAGTGGCTGTCTCAAATCCGGCTGTCGTTAAAGGTATAGCGGAACGAGGACACCATATAGGATGTCATTCGTTTTCCCAT ACTTTTTGGAAACAACCAACGGAAAAAGAAATTAAGGAGGATACCTATAAAGCGTTGAATGCGATAGAAGATTGTATCGG CCAGAAGGTAACTGCTTATCGTGCGCCTGCGTTTTCTATTACGAGAGAAAATTGTTGGATTTTGTCTGTTCTTGCGGAGG CTGGTATTTTATATGATTGTTCGATTTTTCCTACCAGTCGTAGTTTTGGTGGTTTCCCGGAGTATAAAAGTAAGTTCCCT AGTAAAATAGAGATAGATGGGGTATCTATCAAAGAGTTTCCGATAGCTCCATCTACAATATGGGGACGTGAAATTGTATA TTCTGGAGGGGGATACTTCCGCATATTTCCGTATTTTAAGATAAAGGCTTTGACGGTTGATTCTGATTATGTTATGACTT ATTTCCATATTAGGGATTTTGATAAAGAGCAGGCCCGTACGTTTGCGACTCTAGAAGGCGAATCTGTTCTTACAAGGTAT TTTAAGAATTATATAGGCCTAAATTCCTGTTTTAAGAAGTTTACGAGATATGTTTCCGATTTTGACTTTTGTAGTGTAAA AGAAGCGGATGCGGAAATTAATTGGGAAGAGTTACCTGCGATTCGTTTGTAA
Upstream 100 bases:
>100_bases GATTTAATTTTATGGGGCGTATATTGGATTCTAAAAGTATTGATAACGCTATTTGGGATTTACATCTTTGGGATACTAAT CTGTCAAATTACGATTTATT
Downstream 100 bases:
>100_bases CTCGGTAGGTAGTGAGTCCTTGTAATTATTCAGTTATTATGTATAAAAACTTCTTTAAGAGGATGATTGATTTCATCCTT GTGTTCTGTGCATTGGCTAT
Product: putative xylanase/chitin deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Pda4C; Chitooligosaccharide Deacetylase
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKILTFDIEDWWGYDYYKLGDRSDWEPRLDKYLRVVLDLLDGRGIKATFFILGEVAVSNPAVVKGIAERGHHIGCHSFSH TFWKQPTEKEIKEDTYKALNAIEDCIGQKVTAYRAPAFSITRENCWILSVLAEAGILYDCSIFPTSRSFGGFPEYKSKFP SKIEIDGVSIKEFPIAPSTIWGREIVYSGGGYFRIFPYFKIKALTVDSDYVMTYFHIRDFDKEQARTFATLEGESVLTRY FKNYIGLNSCFKKFTRYVSDFDFCSVKEADAEINWEELPAIRL
Sequences:
>Translated_283_residues MKILTFDIEDWWGYDYYKLGDRSDWEPRLDKYLRVVLDLLDGRGIKATFFILGEVAVSNPAVVKGIAERGHHIGCHSFSH TFWKQPTEKEIKEDTYKALNAIEDCIGQKVTAYRAPAFSITRENCWILSVLAEAGILYDCSIFPTSRSFGGFPEYKSKFP SKIEIDGVSIKEFPIAPSTIWGREIVYSGGGYFRIFPYFKIKALTVDSDYVMTYFHIRDFDKEQARTFATLEGESVLTRY FKNYIGLNSCFKKFTRYVSDFDFCSVKEADAEINWEELPAIRL >Mature_283_residues MKILTFDIEDWWGYDYYKLGDRSDWEPRLDKYLRVVLDLLDGRGIKATFFILGEVAVSNPAVVKGIAERGHHIGCHSFSH TFWKQPTEKEIKEDTYKALNAIEDCIGQKVTAYRAPAFSITRENCWILSVLAEAGILYDCSIFPTSRSFGGFPEYKSKFP SKIEIDGVSIKEFPIAPSTIWGREIVYSGGGYFRIFPYFKIKALTVDSDYVMTYFHIRDFDKEQARTFATLEGESVLTRY FKNYIGLNSCFKKFTRYVSDFDFCSVKEADAEINWEELPAIRL
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32694; Mature: 32694
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTFDIEDWWGYDYYKLGDRSDWEPRLDKYLRVVLDLLDGRGIKATFFILGEVAVSNP CEEEEEECHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCC AVVKGIAERGHHIGCHSFSHTFWKQPTEKEIKEDTYKALNAIEDCIGQKVTAYRAPAFSI HHHHHHHHCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCEEE TRENCWILSVLAEAGILYDCSIFPTSRSFGGFPEYKSKFPSKIEIDGVSIKEFPIAPSTI ECCCCCEEEEHHHCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCEEEECCCCCCCC WGREIVYSGGGYFRIFPYFKIKALTVDSDYVMTYFHIRDFDKEQARTFATLEGESVLTRY CCCEEEECCCCEEEEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHEEEECCCHHHHHHH FKNYIGLNSCFKKFTRYVSDFDFCSVKEADAEINWEELPAIRL HHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure MKILTFDIEDWWGYDYYKLGDRSDWEPRLDKYLRVVLDLLDGRGIKATFFILGEVAVSNP CEEEEEECHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCC AVVKGIAERGHHIGCHSFSHTFWKQPTEKEIKEDTYKALNAIEDCIGQKVTAYRAPAFSI HHHHHHHHCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCEEE TRENCWILSVLAEAGILYDCSIFPTSRSFGGFPEYKSKFPSKIEIDGVSIKEFPIAPSTI ECCCCCEEEEHHHCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCEEEECCCCCCCC WGREIVYSGGGYFRIFPYFKIKALTVDSDYVMTYFHIRDFDKEQARTFATLEGESVLTRY CCCEEEECCCCEEEEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHEEEECCCHHHHHHH FKNYIGLNSCFKKFTRYVSDFDFCSVKEADAEINWEELPAIRL HHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA