| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is epsL [H]
Identifier: 150010211
GI number: 150010211
Start: 4445147
End: 4445761
Strand: Direct
Name: epsL [H]
Synonym: BDI_3634
Alternate gene names: 150010211
Gene position: 4445147-4445761 (Clockwise)
Preceding gene: 150010210
Following gene: 150010212
Centisome position: 92.39
GC content: 40.0
Gene sequence:
>615_bases ATGTATAAAAACTTCTTTAAGAGGATGATTGATTTCATCCTTGTGTTCTGTGCATTGGCTATGATCTGGCCGATATTATT GCTGATTACCGTATGGTTACATTTTGCCAACAAGGGTGCCGGCGCATTTTTCTTACAGGAGCGTCCGGGTAAGAATGGTA AGATATTCAAGGTCATCAAATTCAAGACAATGACGGATGAGCGAGGTGCTGATGGGAATTTATTACCTGACGCTGACCGG CTAACGAAAGTCGGTAAGTTTGTCCGTTCCACCTCAATCGACGAGTTGCCCCAATTGATTAATGTTTTGAAAGGAGATAT GGCCTTGATTGGCCCGAGGCCGTTATTGGTACAGTATCTTCCTTTATATAGTAAAGAGCAAGCTCGCCGGCACGAGGTAC GACCGGGAATAACGGGTTGGGCACAAATTAATGGAAGAAATAATATTTCTTGGGCAAAAAAATTTGAATTAGACGTTTGG TATGTAGATCATTGTTCTTTGTCTATTGATATAATGATTGTTTTTAAAACCATAAAAAAAGTTTTATACAGGGAAGACAT TAATCAAGTAGGTGGAGAGTGGGCAACGATGGATCCTTTTACTGGAAATAATTGA
Upstream 100 bases:
>100_bases GTAGTGTAAAAGAAGCGGATGCGGAAATTAATTGGGAAGAGTTACCTGCGATTCGTTTGTAACTCGGTAGGTAGTGAGTC CTTGTAATTATTCAGTTATT
Downstream 100 bases:
>100_bases TATAATAAAATGAGAGATATTGCGGTATATGGTGCTGGTGGTTTTGGATGTGAAATCGCTTGCTTAATTAAATTAGTTAA TGAAAGTCTTCGAAAGGCTA
Product: putative undecaprenyl-phosphate glycosyl-1-phosphate transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MYKNFFKRMIDFILVFCALAMIWPILLLITVWLHFANKGAGAFFLQERPGKNGKIFKVIKFKTMTDERGADGNLLPDADR LTKVGKFVRSTSIDELPQLINVLKGDMALIGPRPLLVQYLPLYSKEQARRHEVRPGITGWAQINGRNNISWAKKFELDVW YVDHCSLSIDIMIVFKTIKKVLYREDINQVGGEWATMDPFTGNN
Sequences:
>Translated_204_residues MYKNFFKRMIDFILVFCALAMIWPILLLITVWLHFANKGAGAFFLQERPGKNGKIFKVIKFKTMTDERGADGNLLPDADR LTKVGKFVRSTSIDELPQLINVLKGDMALIGPRPLLVQYLPLYSKEQARRHEVRPGITGWAQINGRNNISWAKKFELDVW YVDHCSLSIDIMIVFKTIKKVLYREDINQVGGEWATMDPFTGNN >Mature_204_residues MYKNFFKRMIDFILVFCALAMIWPILLLITVWLHFANKGAGAFFLQERPGKNGKIFKVIKFKTMTDERGADGNLLPDADR LTKVGKFVRSTSIDELPQLINVLKGDMALIGPRPLLVQYLPLYSKEQARRHEVRPGITGWAQINGRNNISWAKKFELDVW YVDHCSLSIDIMIVFKTIKKVLYREDINQVGGEWATMDPFTGNN
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=186, Percent_Identity=39.247311827957, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 23453; Mature: 23453
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNFFKRMIDFILVFCALAMIWPILLLITVWLHFANKGAGAFFLQERPGKNGKIFKVIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE FKTMTDERGADGNLLPDADRLTKVGKFVRSTSIDELPQLINVLKGDMALIGPRPLLVQYL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCHHHHHHH PLYSKEQARRHEVRPGITGWAQINGRNNISWAKKFELDVWYVDHCSLSIDIMIVFKTIKK CCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEEHHHHHHHHHHHH VLYREDINQVGGEWATMDPFTGNN HHHHHHHHHHCCCEEECCCCCCCC >Mature Secondary Structure MYKNFFKRMIDFILVFCALAMIWPILLLITVWLHFANKGAGAFFLQERPGKNGKIFKVIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE FKTMTDERGADGNLLPDADRLTKVGKFVRSTSIDELPQLINVLKGDMALIGPRPLLVQYL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCHHHHHHH PLYSKEQARRHEVRPGITGWAQINGRNNISWAKKFELDVWYVDHCSLSIDIMIVFKTIKK CCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEEHHHHHHHHHHHH VLYREDINQVGGEWATMDPFTGNN HHHHHHHHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]