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The map label for this gene is nudC [H]

Identifier: 150010057

GI number: 150010057

Start: 4252559

End: 4253332

Strand: Direct

Name: nudC [H]

Synonym: BDI_3476

Alternate gene names: 150010057

Gene position: 4252559-4253332 (Clockwise)

Preceding gene: 150010055

Following gene: 150010059

Centisome position: 88.39

GC content: 47.03

Gene sequence:

>774_bases
ATGGAAACTTCAAATAAACTCTGTTATTGGTTCCTTTTTTATAAAGACCAACTGTTGCTTCAGAAAGAGAATGATACGTA
TACCATCCCCTATGGCGAGAATCCCCCAGTTCCGGTTTCTCATACGCTGGAGGTTGATTACCGGGATGGACTTCCCGCAC
GTACGGCAGAATTAGATACTCCGGTGGAGGGGAATGACCGTTACGTACATATGGGGTTGCGTGCCTCTTGGGATTATATC
TCGAGAGCGTGTTACGAGAAGGCGGGTAAGGCTTATCAATTGCTTTATTGGGATAGCCATAGCCGTTTCTGTCCGGTATG
TGGTACTCCTACCGTGCAGACTACGTCGATCACGAAGCAATGTCCTTCTTGCAAACATGAGATTTATCCGACAATCTCAG
CAGCGATGATCGTCTTGATCCGTAAGGAGGATTCGATTCTTTTGGTACATGCCCGTAATTTCCGGGGAACTTTCCATGGA
TTAGTGGCCGGATTCTTAGAAGTTGGCGAGACCTTGGAAGAGTGTGTGCGCAGGGAGGTCCGTGAGGAAACGGGTTTAGA
GGTCGATAATATCACTTATTTCGGAAACCAACCTTGGCCTTATCCGAGTGGCTTGATGGTTGGCTTTGTAGCGGATTATG
TAAGTGGGGAAATTAAGTTGCAGGATGAGGAACTAAGCTCTGGTGCCTTCTATACCAAAGATAATCTACCGGAGATCCCC
CGTAAGTTGAGCTTGGCCCGTAAGCTAATCGATTGGTGGTTGGATCATCAATGA

Upstream 100 bases:

>100_bases
TGCCTTCGCACGGTGCACGTTCGCTTCCGCACGTTATTGGATTTTAATTCGTAAGTTCGCGGATGTTTTACATACAGAAA
GATAATTCGGGAATATTAGC

Downstream 100 bases:

>100_bases
GGAGTCCTTTTTTGCGGCCTCTGCCTGTTGTCTTTCGAATTTCTTTTTTTTAGAGATGACATCCGGGGTAGGGAGGTTGC
CGTAGTTTTGCCAAGTTCCG

Product: putative NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
METSNKLCYWFLFYKDQLLLQKENDTYTIPYGENPPVPVSHTLEVDYRDGLPARTAELDTPVEGNDRYVHMGLRASWDYI
SRACYEKAGKAYQLLYWDSHSRFCPVCGTPTVQTTSITKQCPSCKHEIYPTISAAMIVLIRKEDSILLVHARNFRGTFHG
LVAGFLEVGETLEECVRREVREETGLEVDNITYFGNQPWPYPSGLMVGFVADYVSGEIKLQDEELSSGAFYTKDNLPEIP
RKLSLARKLIDWWLDHQ

Sequences:

>Translated_257_residues
METSNKLCYWFLFYKDQLLLQKENDTYTIPYGENPPVPVSHTLEVDYRDGLPARTAELDTPVEGNDRYVHMGLRASWDYI
SRACYEKAGKAYQLLYWDSHSRFCPVCGTPTVQTTSITKQCPSCKHEIYPTISAAMIVLIRKEDSILLVHARNFRGTFHG
LVAGFLEVGETLEECVRREVREETGLEVDNITYFGNQPWPYPSGLMVGFVADYVSGEIKLQDEELSSGAFYTKDNLPEIP
RKLSLARKLIDWWLDHQ
>Mature_257_residues
METSNKLCYWFLFYKDQLLLQKENDTYTIPYGENPPVPVSHTLEVDYRDGLPARTAELDTPVEGNDRYVHMGLRASWDYI
SRACYEKAGKAYQLLYWDSHSRFCPVCGTPTVQTTSITKQCPSCKHEIYPTISAAMIVLIRKEDSILLVHARNFRGTFHG
LVAGFLEVGETLEECVRREVREETGLEVDNITYFGNQPWPYPSGLMVGFVADYVSGEIKLQDEELSSGAFYTKDNLPEIP
RKLSLARKLIDWWLDHQ

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=188, Percent_Identity=31.9148936170213, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI50593112, Length=190, Percent_Identity=32.1052631578947, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI48994995, Length=246, Percent_Identity=34.1463414634146, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI212645999, Length=156, Percent_Identity=35.2564102564103, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71986510, Length=156, Percent_Identity=35.2564102564103, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321371, Length=158, Percent_Identity=33.5443037974684, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 29519; Mature: 29519

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSNKLCYWFLFYKDQLLLQKENDTYTIPYGENPPVPVSHTLEVDYRDGLPARTAELDT
CCCCCCEEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PVEGNDRYVHMGLRASWDYISRACYEKAGKAYQLLYWDSHSRFCPVCGTPTVQTTSITKQ
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCEEECHHHHH
CPSCKHEIYPTISAAMIVLIRKEDSILLVHARNFRGTFHGLVAGFLEVGETLEECVRREV
CCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
REETGLEVDNITYFGNQPWPYPSGLMVGFVADYVSGEIKLQDEELSSGAFYTKDNLPEIP
HHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCHHHH
RKLSLARKLIDWWLDHQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METSNKLCYWFLFYKDQLLLQKENDTYTIPYGENPPVPVSHTLEVDYRDGLPARTAELDT
CCCCCCEEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PVEGNDRYVHMGLRASWDYISRACYEKAGKAYQLLYWDSHSRFCPVCGTPTVQTTSITKQ
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCEEECHHHHH
CPSCKHEIYPTISAAMIVLIRKEDSILLVHARNFRGTFHGLVAGFLEVGETLEECVRREV
CCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
REETGLEVDNITYFGNQPWPYPSGLMVGFVADYVSGEIKLQDEELSSGAFYTKDNLPEIP
HHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCHHHH
RKLSLARKLIDWWLDHQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA