| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010038
Identifier: 150010038
GI number: 150010038
Start: 4214519
End: 4215541
Strand: Direct
Name: 150010038
Synonym: BDI_3457
Alternate gene names: NA
Gene position: 4214519-4215541 (Clockwise)
Preceding gene: 150010037
Following gene: 150010039
Centisome position: 87.59
GC content: 46.73
Gene sequence:
>1023_bases ATGAAAAGATATTTACCTTACCTGTTTGTGTTAGGATTATTGATGGTCTCTTGCGTTCGGGATGTGGAGATTGATTTGGA GGATCTACCGGATCGGATTGTACTGAACGCATCGGTATGTCCCGGAAAGGAGGTGTGTGCTCATCTCTCGAAAACATGGT TTATCATGGATAGCGTTCCCGATTTTGAGTTATCCGATGCGAAAGTCCGTGTCTATGTCAATGATGAGTTTCAAGGTCTT ATGCGCAATGATGACCTGCCGGAAGATTCTATACATTCACGGGGGCAATATGTTCTGCCCGGTTGTTTCGTGAGACAGGG GGATTGTTTGCGTATAGAGGCCGAGGCCGATGGGTATGAGCCGGTATCCGGGGAAACTCGTATCCCCGGTCGGGCACGGA TTTATGAGGTGGATACCTTATCCTATCGATCTTCTGCCTACTATGCCGAATATCTGCGTTTCTCTGTTAAAATCGGGGTT GAGACGGATTCCTATTATCGTTTAATCGTGGAGCAGATCTTGGACTTCCGGAAGGGGGATAGTACCCGTACCGTAACCTC TTTCCGTAGCTTAGGAGGATATAGTTGGTATTATTCCGGTTTTAGCGTGGATTATGAGGATCCTGTTTTCCAGTCTTTTG GAGGTAGTCCTATCACGAGCCAGATGGATGGGCGTTACTGTATGGGCGTATTTAGAGGGGAGGATCTGGTTAATACGAAT GCTATTAAGGTTTCTGTTTTTCCTGTTGAATACTCGTATGAGAGTGATACCCTTTCTCTGGACGTTCATTACGATGTGCG CCTGTTGTCTATCTCCGAGGATTATTATCGATATATGAAGATTATGAGGGGGTACTCTATCACGATCGGCGACGCGAATT TCGGGGCGTTGATAGAGCCTGCCGATACGTATTCGAATGTGGAGAACGGCTTTGGGATTGTCACCGGATATCAAGAGGAT AAATCGCGTATCACGATGCCGAGAGACACGGTGCCTCCTTATTGGAATCCTTGGGATGGATAA
Upstream 100 bases:
>100_bases GGTAAACCAGGATATAAATCAGCGATATCAGGTGGTGCTACAGGAGACGATTTTGTTCTATTGCATGCCCTCGGTTTCTT ATACTTATAAATTCTAGCTT
Downstream 100 bases:
>100_bases GCCCATCCTGCGTTGACGACCTGCGCTTGCCGGTTCATACATCATGAAGCGGTAAGTTCACGAGGTATGAAAAAAAGGCT TTTCCTTGATAGGGGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKRYLPYLFVLGLLMVSCVRDVEIDLEDLPDRIVLNASVCPGKEVCAHLSKTWFIMDSVPDFELSDAKVRVYVNDEFQGL MRNDDLPEDSIHSRGQYVLPGCFVRQGDCLRIEAEADGYEPVSGETRIPGRARIYEVDTLSYRSSAYYAEYLRFSVKIGV ETDSYYRLIVEQILDFRKGDSTRTVTSFRSLGGYSWYYSGFSVDYEDPVFQSFGGSPITSQMDGRYCMGVFRGEDLVNTN AIKVSVFPVEYSYESDTLSLDVHYDVRLLSISEDYYRYMKIMRGYSITIGDANFGALIEPADTYSNVENGFGIVTGYQED KSRITMPRDTVPPYWNPWDG
Sequences:
>Translated_340_residues MKRYLPYLFVLGLLMVSCVRDVEIDLEDLPDRIVLNASVCPGKEVCAHLSKTWFIMDSVPDFELSDAKVRVYVNDEFQGL MRNDDLPEDSIHSRGQYVLPGCFVRQGDCLRIEAEADGYEPVSGETRIPGRARIYEVDTLSYRSSAYYAEYLRFSVKIGV ETDSYYRLIVEQILDFRKGDSTRTVTSFRSLGGYSWYYSGFSVDYEDPVFQSFGGSPITSQMDGRYCMGVFRGEDLVNTN AIKVSVFPVEYSYESDTLSLDVHYDVRLLSISEDYYRYMKIMRGYSITIGDANFGALIEPADTYSNVENGFGIVTGYQED KSRITMPRDTVPPYWNPWDG >Mature_340_residues MKRYLPYLFVLGLLMVSCVRDVEIDLEDLPDRIVLNASVCPGKEVCAHLSKTWFIMDSVPDFELSDAKVRVYVNDEFQGL MRNDDLPEDSIHSRGQYVLPGCFVRQGDCLRIEAEADGYEPVSGETRIPGRARIYEVDTLSYRSSAYYAEYLRFSVKIGV ETDSYYRLIVEQILDFRKGDSTRTVTSFRSLGGYSWYYSGFSVDYEDPVFQSFGGSPITSQMDGRYCMGVFRGEDLVNTN AIKVSVFPVEYSYESDTLSLDVHYDVRLLSISEDYYRYMKIMRGYSITIGDANFGALIEPADTYSNVENGFGIVTGYQED KSRITMPRDTVPPYWNPWDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38865; Mature: 38865
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLPYLFVLGLLMVSCVRDVEIDLEDLPDRIVLNASVCPGKEVCAHLSKTWFIMDSVP CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCHHHHHHHHCCEEEEEECCC DFELSDAKVRVYVNDEFQGLMRNDDLPEDSIHSRGQYVLPGCFVRQGDCLRIEAEADGYE CCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHCCCCEECCEEEEECCCEEEEEECCCCCC PVSGETRIPGRARIYEVDTLSYRSSAYYAEYLRFSVKIGVETDSYYRLIVEQILDFRKGD CCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCC STRTVTSFRSLGGYSWYYSGFSVDYEDPVFQSFGGSPITSQMDGRYCMGVFRGEDLVNTN CCHHHHHHHHCCCEEEEECCEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCEECCC AIKVSVFPVEYSYESDTLSLDVHYDVRLLSISEDYYRYMKIMRGYSITIGDANFGALIEP EEEEEEEEEEEECCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCEEEECCCCCCCEECC ADTYSNVENGFGIVTGYQEDKSRITMPRDTVPPYWNPWDG HHHHCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKRYLPYLFVLGLLMVSCVRDVEIDLEDLPDRIVLNASVCPGKEVCAHLSKTWFIMDSVP CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCHHHHHHHHCCEEEEEECCC DFELSDAKVRVYVNDEFQGLMRNDDLPEDSIHSRGQYVLPGCFVRQGDCLRIEAEADGYE CCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHCCCCEECCEEEEECCCEEEEEECCCCCC PVSGETRIPGRARIYEVDTLSYRSSAYYAEYLRFSVKIGVETDSYYRLIVEQILDFRKGD CCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCC STRTVTSFRSLGGYSWYYSGFSVDYEDPVFQSFGGSPITSQMDGRYCMGVFRGEDLVNTN CCHHHHHHHHCCCEEEEECCEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCEECCC AIKVSVFPVEYSYESDTLSLDVHYDVRLLSISEDYYRYMKIMRGYSITIGDANFGALIEP EEEEEEEEEEEECCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCEEEECCCCCCCEECC ADTYSNVENGFGIVTGYQEDKSRITMPRDTVPPYWNPWDG HHHHCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA