Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150010037

Identifier: 150010037

GI number: 150010037

Start: 4211852

End: 4214515

Strand: Direct

Name: 150010037

Synonym: BDI_3456

Alternate gene names: NA

Gene position: 4211852-4214515 (Clockwise)

Preceding gene: 150010036

Following gene: 150010038

Centisome position: 87.54

GC content: 48.27

Gene sequence:

>2664_bases
ATGAGATCTATTGTTGTATGGCTGATAGGGATTCTTTTGCTTCCCGGTTGGATGGGACATCTATATGCGCAGATGCCCGA
ACCTACGCCGACGGTTACGTTGGATATGCGGCAGGTTCCCCTGTTGGATATATTGATGGAGCTTGAGAAACAAACCGGAT
TGTTCTTCTCGTACGAGTCTTCTCTACTGAAAGAGCTGCCAGAGGTTTCCCTGTCTGTCCGGGATGAATCCTTGTCGTAC
TGCTTGAAGCGCTTATTTTCCCCATTACCGATTATCTATCGGGTTACGGGGCAATATATCATCTTAAAGCGAAAGCCCCG
TCAATATACGATCAGCGGATTCGTCAGGGATTCAGCCTCGTATGAGAGTTTGTTGGGGGCCTCGGTTCTGGTGAAAAGTT
CGAGGGGAGGGACGATGTCTAATAATTACGGCTTTTACAGCTTGATACTTCCACCCGGTAAGGTTCGCCTTAGGGCCTCG
TACGTGGGCTTTAAGGCGATGGAGATAGAGATCGATTTGCAAAGGGATACGATGATCGACTTCCCATTGAGGTCATTGGC
CTCGTTAGGCGAGGTCGTTATTCGGGGGACCCGGCCTCGCTACGAGATATTGAGTAGCCGTGCGGGGGTGATCGACGTAC
CTGCCGAGCGGGTGAAGTCGATGCCCGCTTTGCTGGGGGAGGCGGATCTGGTGAAGACCTTACAGCAGTTGCCGGGCGTG
GCGGTAGGCACCGAGGGAATGACCGGCTTGTATGTGCGTGGGGGCGGGGCCGATGAGAATTTGTATCTGCTGGATGGAAA
TCCGGTCTATCATGTGAACCATTTGTTGGGGTTTTTCTCGGCGTTCAACCCGGATGCGATAAAGAATACCCGGTTTTATA
AAGGGAGCTTTCCGGCGGAATACGGCGGAAGGCTCTCGTCGGTTGTAGATGTCCGTATGAATGACGGTAATCGGCAGGAG
TATCACGGGAATATCTCCGTGGGTTTGCTTTCCGCACGGGCCAATCTGGAGGGGCCGATTGTTAAGGATCGCTCCTCGTT
TAATGTCTCGGTACGTCGTACGTGGTTGGATTTGATAACAGGGACGGCTTTGGCGATCATTAATAAGAACAGTGATACCA
AGGAGAGTTTCGGTTATCACTTTTTTGATATAAACGCGAAGGTGAACCATTCTTTCTCGGAACGTAGCCGGGCCTATTTG
AGCTTTTATATGGGGCAAGATGCTTTTCGGCAGGGAAGCAAGGAGAAGCATGAGGATTCGGATGATATGTTTCTCTGGCG
TTGGGGAAACTTGATCGGCTCCGCAGGGTGGAACTACGTGTTCGGGCAAAAGCTGTTTGGTAATCTAATGGTGGGCTACA
GCCGTTTTCGCTCGCATATCCGGCAAGAGGCGAAGGGGTATGAAATCGAAGGAAATAGGGCAGAACGGCAATCAATTAAG
CGGGATAGCCGTTATAAATCGGAGATGGAGGATCTGAGCGTACGGCTGTCAGTGGATTACAGTCCTTCAATGAATCACCG
GATACGAATGGGCACGGATTACCTGTATCATAATTTTCGTCCGGAGAATAGCCAGCAACGGTCTTGGGTGAACGATTCGT
TAGTAAATCCCGTATATGAGCTTTTGTATGATTATTCCTTGATAAAAGGGCATGAGTTCTCTTTGTTTGCCGAGGATGAG
ATGCGGGTCACGGATCGCTTGCGGGTGAATGCCGGATTGCGGTATACCTTGTTTCATGTAGAGAATGAGATCTATCATTC
TTTTCAGCCTCGTTTGTCGGCACGTTATTTACTTCGTCCGGATCTATCGGCGAAGATATCCTACAGTAAGATGAACCAAT
ATGTCCACTTATTATCGAATACCTATGTGAACCAGCCTACGGATATTTGGGTCCCGGTGACGGAGCAAGTCCCTCCGATG
AGTTCTCACCAGATTACTGCCGGGCTTTATTATAATCTGAAACGGATGTATGATTTCTCGATCGAGGGGTATTATAAACG
GTTGAATAACTTGATTGATTATAAGGATCATTGGCCGGTTGAGACACATTTCTCCGGTTGGGAAGACCGGGTCGGTTTGG
GAAAGGGTAAGACCTATGGTGTGGAGTTTATGGCGCAAAAGACAAATGGGAAGACAACCGGATGGATCGGGTATACGCTC
TCTTGGTCGGATCGGTGGTTTCCGGATGGTTCCGTGAATAAGGGGCGTCATTTCCCGTTTCGCTTCGACAACCGGCATAA
GGTGAATGTGGTCGTTTCTCGTAAGTTATCCCGGAAGGTGGAGTTGACGGGAGCTTGGGTGTTCGCCTCAGGAAACCATA
TTAGCTTGCCGGAGTATAAATATCTGTCTCCGATTTATCAGAAAGAGAACGGGTATGCCGGAGTAGATTCATACAGACCG
ATGAATTCAGGTTTGAGCGCTCGTAATAATTATCAATTGTCTCCTTATCACCGTTTGGATCTGGGCGTGAATTTTTATCG
ATATAAAAAGAAGGGTCGGATGGGGATTTGGAACATAAGCATATACAATACGTATTTGAAACCGAATCCCTTCATGACGG
AGGTTATGGTAAACCAGGATATAAATCAGCGATATCAGGTGGTGCTACAGGAGACGATTTTGTTCTATTGCATGCCCTCG
GTTTCTTATACTTATAAATTCTAG

Upstream 100 bases:

>100_bases
ACTTTTAATAATCAGCCTTTGGAGGATGTCTTGCAGGTTGTTAACCAGACATTGGACGCTCATTTGGTTTCCACTTTGAA
GAAATAAAATCAGATCATTT

Downstream 100 bases:

>100_bases
CTTATGAAAAGATATTTACCTTACCTGTTTGTGTTAGGATTATTGATGGTCTCTTGCGTTCGGGATGTGGAGATTGATTT
GGAGGATCTACCGGATCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB Family Protein; Ferric Aerobactin Receptor; NB Dependent/Ligand-Gated Channel; NB-Dependent Outer Membrane Receptor; NB Dependent Outer Membrane Protein; Nb Family Protein; NB Dependent Receptor; NB Dependent Receptor Domain Protein; Nb Domain Protein; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Protein; Outer Membrane Protein Omp; NB Dependent Receptor Domain-Containing Protein

Number of amino acids: Translated: 887; Mature: 887

Protein sequence:

>887_residues
MRSIVVWLIGILLLPGWMGHLYAQMPEPTPTVTLDMRQVPLLDILMELEKQTGLFFSYESSLLKELPEVSLSVRDESLSY
CLKRLFSPLPIIYRVTGQYIILKRKPRQYTISGFVRDSASYESLLGASVLVKSSRGGTMSNNYGFYSLILPPGKVRLRAS
YVGFKAMEIEIDLQRDTMIDFPLRSLASLGEVVIRGTRPRYEILSSRAGVIDVPAERVKSMPALLGEADLVKTLQQLPGV
AVGTEGMTGLYVRGGGADENLYLLDGNPVYHVNHLLGFFSAFNPDAIKNTRFYKGSFPAEYGGRLSSVVDVRMNDGNRQE
YHGNISVGLLSARANLEGPIVKDRSSFNVSVRRTWLDLITGTALAIINKNSDTKESFGYHFFDINAKVNHSFSERSRAYL
SFYMGQDAFRQGSKEKHEDSDDMFLWRWGNLIGSAGWNYVFGQKLFGNLMVGYSRFRSHIRQEAKGYEIEGNRAERQSIK
RDSRYKSEMEDLSVRLSVDYSPSMNHRIRMGTDYLYHNFRPENSQQRSWVNDSLVNPVYELLYDYSLIKGHEFSLFAEDE
MRVTDRLRVNAGLRYTLFHVENEIYHSFQPRLSARYLLRPDLSAKISYSKMNQYVHLLSNTYVNQPTDIWVPVTEQVPPM
SSHQITAGLYYNLKRMYDFSIEGYYKRLNNLIDYKDHWPVETHFSGWEDRVGLGKGKTYGVEFMAQKTNGKTTGWIGYTL
SWSDRWFPDGSVNKGRHFPFRFDNRHKVNVVVSRKLSRKVELTGAWVFASGNHISLPEYKYLSPIYQKENGYAGVDSYRP
MNSGLSARNNYQLSPYHRLDLGVNFYRYKKKGRMGIWNISIYNTYLKPNPFMTEVMVNQDINQRYQVVLQETILFYCMPS
VSYTYKF

Sequences:

>Translated_887_residues
MRSIVVWLIGILLLPGWMGHLYAQMPEPTPTVTLDMRQVPLLDILMELEKQTGLFFSYESSLLKELPEVSLSVRDESLSY
CLKRLFSPLPIIYRVTGQYIILKRKPRQYTISGFVRDSASYESLLGASVLVKSSRGGTMSNNYGFYSLILPPGKVRLRAS
YVGFKAMEIEIDLQRDTMIDFPLRSLASLGEVVIRGTRPRYEILSSRAGVIDVPAERVKSMPALLGEADLVKTLQQLPGV
AVGTEGMTGLYVRGGGADENLYLLDGNPVYHVNHLLGFFSAFNPDAIKNTRFYKGSFPAEYGGRLSSVVDVRMNDGNRQE
YHGNISVGLLSARANLEGPIVKDRSSFNVSVRRTWLDLITGTALAIINKNSDTKESFGYHFFDINAKVNHSFSERSRAYL
SFYMGQDAFRQGSKEKHEDSDDMFLWRWGNLIGSAGWNYVFGQKLFGNLMVGYSRFRSHIRQEAKGYEIEGNRAERQSIK
RDSRYKSEMEDLSVRLSVDYSPSMNHRIRMGTDYLYHNFRPENSQQRSWVNDSLVNPVYELLYDYSLIKGHEFSLFAEDE
MRVTDRLRVNAGLRYTLFHVENEIYHSFQPRLSARYLLRPDLSAKISYSKMNQYVHLLSNTYVNQPTDIWVPVTEQVPPM
SSHQITAGLYYNLKRMYDFSIEGYYKRLNNLIDYKDHWPVETHFSGWEDRVGLGKGKTYGVEFMAQKTNGKTTGWIGYTL
SWSDRWFPDGSVNKGRHFPFRFDNRHKVNVVVSRKLSRKVELTGAWVFASGNHISLPEYKYLSPIYQKENGYAGVDSYRP
MNSGLSARNNYQLSPYHRLDLGVNFYRYKKKGRMGIWNISIYNTYLKPNPFMTEVMVNQDINQRYQVVLQETILFYCMPS
VSYTYKF
>Mature_887_residues
MRSIVVWLIGILLLPGWMGHLYAQMPEPTPTVTLDMRQVPLLDILMELEKQTGLFFSYESSLLKELPEVSLSVRDESLSY
CLKRLFSPLPIIYRVTGQYIILKRKPRQYTISGFVRDSASYESLLGASVLVKSSRGGTMSNNYGFYSLILPPGKVRLRAS
YVGFKAMEIEIDLQRDTMIDFPLRSLASLGEVVIRGTRPRYEILSSRAGVIDVPAERVKSMPALLGEADLVKTLQQLPGV
AVGTEGMTGLYVRGGGADENLYLLDGNPVYHVNHLLGFFSAFNPDAIKNTRFYKGSFPAEYGGRLSSVVDVRMNDGNRQE
YHGNISVGLLSARANLEGPIVKDRSSFNVSVRRTWLDLITGTALAIINKNSDTKESFGYHFFDINAKVNHSFSERSRAYL
SFYMGQDAFRQGSKEKHEDSDDMFLWRWGNLIGSAGWNYVFGQKLFGNLMVGYSRFRSHIRQEAKGYEIEGNRAERQSIK
RDSRYKSEMEDLSVRLSVDYSPSMNHRIRMGTDYLYHNFRPENSQQRSWVNDSLVNPVYELLYDYSLIKGHEFSLFAEDE
MRVTDRLRVNAGLRYTLFHVENEIYHSFQPRLSARYLLRPDLSAKISYSKMNQYVHLLSNTYVNQPTDIWVPVTEQVPPM
SSHQITAGLYYNLKRMYDFSIEGYYKRLNNLIDYKDHWPVETHFSGWEDRVGLGKGKTYGVEFMAQKTNGKTTGWIGYTL
SWSDRWFPDGSVNKGRHFPFRFDNRHKVNVVVSRKLSRKVELTGAWVFASGNHISLPEYKYLSPIYQKENGYAGVDSYRP
MNSGLSARNNYQLSPYHRLDLGVNFYRYKKKGRMGIWNISIYNTYLKPNPFMTEVMVNQDINQRYQVVLQETILFYCMPS
VSYTYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102216; Mature: 102216

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIVVWLIGILLLPGWMGHLYAQMPEPTPTVTLDMRQVPLLDILMELEKQTGLFFSYES
CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEHHH
SLLKELPEVSLSVRDESLSYCLKRLFSPLPIIYRVTGQYIILKRKPRQYTISGFVRDSAS
HHHHHCCCCEEEECHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEEEEECCCC
YESLLGASVLVKSSRGGTMSNNYGFYSLILPPGKVRLRASYVGFKAMEIEIDLQRDTMID
HHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECEEEEEEEEEECCCCEEC
FPLRSLASLGEVVIRGTRPRYEILSSRAGVIDVPAERVKSMPALLGEADLVKTLQQLPGV
CCHHHHHHHHHEEEECCCCHHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCE
AVGTEGMTGLYVRGGGADENLYLLDGNPVYHVNHLLGFFSAFNPDAIKNTRFYKGSFPAE
EECCCCCEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCHHCCCEEECCCCCHH
YGGRLSSVVDVRMNDGNRQEYHGNISVGLLSARANLEGPIVKDRSSFNVSVRRTWLDLIT
HCCCEEEEEEEEECCCCCEEECCCEEEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHC
GTALAIINKNSDTKESFGYHFFDINAKVNHSFSERSRAYLSFYMGQDAFRQGSKEKHEDS
CCEEEEEECCCCCHHHCCEEEEEECEEECCCHHHHHHHHHHEECCCHHHHCCCCCCCCCC
DDMFLWRWGNLIGSAGWNYVFGQKLFGNLMVGYSRFRSHIRQEAKGYEIEGNRAERQSIK
CCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
RDSRYKSEMEDLSVRLSVDYSPSMNHRIRMGTDYLYHNFRPENSQQRSWVNDSLVNPVYE
HHHHHHHHHHCEEEEEEEECCCCCCCEEEECCHHHEECCCCCCCHHHHHCCHHHHHHHHH
LLYDYSLIKGHEFSLFAEDEMRVTDRLRVNAGLRYTLFHVENEIYHSFQPRLSARYLLRP
HHHHHHHCCCCEEEEEECCCCCEEHEEEECCCCEEEEEEECHHHHHHCCCCCCEEEEECC
DLSAKISYSKMNQYVHLLSNTYVNQPTDIWVPVTEQVPPMSSHQITAGLYYNLKRMYDFS
CCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEHHEEEEEHHEECC
IEGYYKRLNNLIDYKDHWPVETHFSGWEDRVGLGKGKTYGVEFMAQKTNGKTTGWIGYTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEEEE
SWSDRWFPDGSVNKGRHFPFRFDNRHKVNVVVSRKLSRKVELTGAWVFASGNHISLPEYK
ECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCHH
YLSPIYQKENGYAGVDSYRPMNSGLSARNNYQLSPYHRLDLGVNFYRYKKKGRMGIWNIS
HHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEE
IYNTYLKPNPFMTEVMVNQDINQRYQVVLQETILFYCMPSVSYTYKF
EEEEEECCCCCEEHEECCCCHHHHHHHHHHHHHHHEECCCCCEEECC
>Mature Secondary Structure
MRSIVVWLIGILLLPGWMGHLYAQMPEPTPTVTLDMRQVPLLDILMELEKQTGLFFSYES
CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEHHH
SLLKELPEVSLSVRDESLSYCLKRLFSPLPIIYRVTGQYIILKRKPRQYTISGFVRDSAS
HHHHHCCCCEEEECHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEEEEECCCC
YESLLGASVLVKSSRGGTMSNNYGFYSLILPPGKVRLRASYVGFKAMEIEIDLQRDTMID
HHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECEEEEEEEEEECCCCEEC
FPLRSLASLGEVVIRGTRPRYEILSSRAGVIDVPAERVKSMPALLGEADLVKTLQQLPGV
CCHHHHHHHHHEEEECCCCHHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCE
AVGTEGMTGLYVRGGGADENLYLLDGNPVYHVNHLLGFFSAFNPDAIKNTRFYKGSFPAE
EECCCCCEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCHHCCCEEECCCCCHH
YGGRLSSVVDVRMNDGNRQEYHGNISVGLLSARANLEGPIVKDRSSFNVSVRRTWLDLIT
HCCCEEEEEEEEECCCCCEEECCCEEEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHC
GTALAIINKNSDTKESFGYHFFDINAKVNHSFSERSRAYLSFYMGQDAFRQGSKEKHEDS
CCEEEEEECCCCCHHHCCEEEEEECEEECCCHHHHHHHHHHEECCCHHHHCCCCCCCCCC
DDMFLWRWGNLIGSAGWNYVFGQKLFGNLMVGYSRFRSHIRQEAKGYEIEGNRAERQSIK
CCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
RDSRYKSEMEDLSVRLSVDYSPSMNHRIRMGTDYLYHNFRPENSQQRSWVNDSLVNPVYE
HHHHHHHHHHCEEEEEEEECCCCCCCEEEECCHHHEECCCCCCCHHHHHCCHHHHHHHHH
LLYDYSLIKGHEFSLFAEDEMRVTDRLRVNAGLRYTLFHVENEIYHSFQPRLSARYLLRP
HHHHHHHCCCCEEEEEECCCCCEEHEEEECCCCEEEEEEECHHHHHHCCCCCCEEEEECC
DLSAKISYSKMNQYVHLLSNTYVNQPTDIWVPVTEQVPPMSSHQITAGLYYNLKRMYDFS
CCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEHHEEEEEHHEECC
IEGYYKRLNNLIDYKDHWPVETHFSGWEDRVGLGKGKTYGVEFMAQKTNGKTTGWIGYTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEEEE
SWSDRWFPDGSVNKGRHFPFRFDNRHKVNVVVSRKLSRKVELTGAWVFASGNHISLPEYK
ECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCHH
YLSPIYQKENGYAGVDSYRPMNSGLSARNNYQLSPYHRLDLGVNFYRYKKKGRMGIWNIS
HHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEE
IYNTYLKPNPFMTEVMVNQDINQRYQVVLQETILFYCMPSVSYTYKF
EEEEEECCCCCEEHEECCCCHHHHHHHHHHHHHHHEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA