| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009999
Identifier: 150009999
GI number: 150009999
Start: 4159917
End: 4161281
Strand: Direct
Name: 150009999
Synonym: BDI_3418
Alternate gene names: NA
Gene position: 4159917-4161281 (Clockwise)
Preceding gene: 150009998
Following gene: 150010000
Centisome position: 86.46
GC content: 40.37
Gene sequence:
>1365_bases ATGAAAAAGAGGAATTTATTTTGTGTCTCTGCCTTGTGTGCATTGATGTCTTTCTCGTTTGTCAGCTGTGATGATGACAA TGAGCCTTCACTGAATATACCAAATGTATCTGTAACTAATGTCAGTTTTACGGATGAGAATCCGGAAGCTTTAAAAGTTA GTGGAACCTTAAATTGGACAGCTCCGTCTTCTGTTGACAATGTAACAAAGTACGTGATTTATGGTTCCTCTGATGGAACC GTTAAAGATATGAAAATTGCGGAGGTAGAAGTTGGAACACATTCATATGCTATTACGGATGTCGTAAATATAGGTTATTT ATTAGTTATAGCCGCGAATGCGGAAGGTGAGTCTTCTGTTTATGCTTCCGTAAGAGTTATTGATTTTGTGAAGGATAGTT CTTTCATGGCTTTATATTTCTTGAATTCGGGCAATATGGGAAATAACAACTCTTCTTTATATATGTACGACATAGAAAAG GATGAGGTTGTTCCCGATTATTTCTTGGCTCAAAATGGCAGGGGGCTGGGAGATACGGCACAGGATATGATCGTGTATGG CGATAAGATGTATATTGCGGTATATGGAGAGTCTACGATAGAAGTGACGGATCTGAAGGCAAAATCCATTAAGCAAGTCA AGACAGAGGGGCAGCCCCGTTATATGGTATCAGAGGGTGGAAAAGTCTATATTAGCTATTATAATGGATATGTCGCTCGT TTGGATACCGCATCCTTGGAGGTTGAGGCGAAGGTAAAGGTCGGACGGAATCCGGAACAATTGGCGGTATCTTCTAATAA ATTGTTTGTCTCAAACTCCGGAGGTATGGATTACAGTACCGAGGTTGGGTATGATAAAACGGTATCAGTGGTTGATCTGT CTACTTTTACAGAGATAAAGAAGTTGGATGTAGTATTGAATCCCACACGGATACAGGCGGATGAGCAAGGAAATGTATAT GTGGTTTCTATGGGTAACTATGCGGATATACCCAATACGGTACAAAAGATAAATACGGAGACTTATGAGGTTACTTCCCT TACGAATTGTCCAAACGCAACGGAGATGGCCTATGAGGATGGCAAGCTATTTCTGTTCTATGCGCAATGGGGAATGTCTA GCCCTGCATTTTTAACATTTGATACAAAGAGTCAATCTGCGGGAACGAGCTTTATTACAGATGGAACCTCAATACAGTCC CCTTATTCAATCAGTGCCGTGGGTGGAAATGTCTATGTCGCAGAGTCTGATTATAAGAATAATGGCGATATTTATTGTTT CGGAGGTGACGGTAAATTGTTCAAGAAGTTTGAGGCCGGTTTAAATCCCATGAAAGTAGTCCTCGCTCAAAAAGATAATA TCTAA
Upstream 100 bases:
>100_bases CGAACGTGAATTATGATGTTATTCAGTATTATCCCATGCCGGGCCGTTCTTGGCGTTTAAGTGTTTGTTTATCCTATTAG TAAACTATAAAAGTAAAGTA
Downstream 100 bases:
>100_bases TGCGATTACTGATTCTCTTAGGGTTCGCTTTCTGGATGGTGGCATGTACGCCATCCGGAAAGCAAACTTCTTCCAAGGAA GCTCTTTCCTCTGATAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKKRNLFCVSALCALMSFSFVSCDDDNEPSLNIPNVSVTNVSFTDENPEALKVSGTLNWTAPSSVDNVTKYVIYGSSDGT VKDMKIAEVEVGTHSYAITDVVNIGYLLVIAANAEGESSVYASVRVIDFVKDSSFMALYFLNSGNMGNNNSSLYMYDIEK DEVVPDYFLAQNGRGLGDTAQDMIVYGDKMYIAVYGESTIEVTDLKAKSIKQVKTEGQPRYMVSEGGKVYISYYNGYVAR LDTASLEVEAKVKVGRNPEQLAVSSNKLFVSNSGGMDYSTEVGYDKTVSVVDLSTFTEIKKLDVVLNPTRIQADEQGNVY VVSMGNYADIPNTVQKINTETYEVTSLTNCPNATEMAYEDGKLFLFYAQWGMSSPAFLTFDTKSQSAGTSFITDGTSIQS PYSISAVGGNVYVAESDYKNNGDIYCFGGDGKLFKKFEAGLNPMKVVLAQKDNI
Sequences:
>Translated_454_residues MKKRNLFCVSALCALMSFSFVSCDDDNEPSLNIPNVSVTNVSFTDENPEALKVSGTLNWTAPSSVDNVTKYVIYGSSDGT VKDMKIAEVEVGTHSYAITDVVNIGYLLVIAANAEGESSVYASVRVIDFVKDSSFMALYFLNSGNMGNNNSSLYMYDIEK DEVVPDYFLAQNGRGLGDTAQDMIVYGDKMYIAVYGESTIEVTDLKAKSIKQVKTEGQPRYMVSEGGKVYISYYNGYVAR LDTASLEVEAKVKVGRNPEQLAVSSNKLFVSNSGGMDYSTEVGYDKTVSVVDLSTFTEIKKLDVVLNPTRIQADEQGNVY VVSMGNYADIPNTVQKINTETYEVTSLTNCPNATEMAYEDGKLFLFYAQWGMSSPAFLTFDTKSQSAGTSFITDGTSIQS PYSISAVGGNVYVAESDYKNNGDIYCFGGDGKLFKKFEAGLNPMKVVLAQKDNI >Mature_454_residues MKKRNLFCVSALCALMSFSFVSCDDDNEPSLNIPNVSVTNVSFTDENPEALKVSGTLNWTAPSSVDNVTKYVIYGSSDGT VKDMKIAEVEVGTHSYAITDVVNIGYLLVIAANAEGESSVYASVRVIDFVKDSSFMALYFLNSGNMGNNNSSLYMYDIEK DEVVPDYFLAQNGRGLGDTAQDMIVYGDKMYIAVYGESTIEVTDLKAKSIKQVKTEGQPRYMVSEGGKVYISYYNGYVAR LDTASLEVEAKVKVGRNPEQLAVSSNKLFVSNSGGMDYSTEVGYDKTVSVVDLSTFTEIKKLDVVLNPTRIQADEQGNVY VVSMGNYADIPNTVQKINTETYEVTSLTNCPNATEMAYEDGKLFLFYAQWGMSSPAFLTFDTKSQSAGTSFITDGTSIQS PYSISAVGGNVYVAESDYKNNGDIYCFGGDGKLFKKFEAGLNPMKVVLAQKDNI
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49594; Mature: 49594
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRNLFCVSALCALMSFSFVSCDDDNEPSLNIPNVSVTNVSFTDENPEALKVSGTLNWT CCCCCEEHHHHHHHHHCCEEEECCCCCCCCEECCCEEEEEEEECCCCCCEEEEEEEEEEC APSSVDNVTKYVIYGSSDGTVKDMKIAEVEVGTHSYAITDVVNIGYLLVIAANAEGESSV CCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEHHHCCCEEEEEEECCCCCCEE YASVRVIDFVKDSSFMALYFLNSGNMGNNNSSLYMYDIEKDEVVPDYFLAQNGRGLGDTA EEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHEECCCCCCCCCC QDMIVYGDKMYIAVYGESTIEVTDLKAKSIKQVKTEGQPRYMVSEGGKVYISYYNGYVAR CCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCEEEE LDTASLEVEAKVKVGRNPEQLAVSSNKLFVSNSGGMDYSTEVGYDKTVSVVDLSTFTEIK EECCEEEEEEEEEECCCHHHEEEECCEEEEECCCCCCEECCCCCCCEEEEEEEHHHHCEE KLDVVLNPTRIQADEQGNVYVVSMGNYADIPNTVQKINTETYEVTSLTNCPNATEMAYED EEEEEECCCEEEECCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEECC GKLFLFYAQWGMSSPAFLTFDTKSQSAGTSFITDGTSIQSPYSISAVGGNVYVAESDYKN CCEEEEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCC NGDIYCFGGDGKLFKKFEAGLNPMKVVLAQKDNI CCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure MKKRNLFCVSALCALMSFSFVSCDDDNEPSLNIPNVSVTNVSFTDENPEALKVSGTLNWT CCCCCEEHHHHHHHHHCCEEEECCCCCCCCEECCCEEEEEEEECCCCCCEEEEEEEEEEC APSSVDNVTKYVIYGSSDGTVKDMKIAEVEVGTHSYAITDVVNIGYLLVIAANAEGESSV CCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEHHHCCCEEEEEEECCCCCCEE YASVRVIDFVKDSSFMALYFLNSGNMGNNNSSLYMYDIEKDEVVPDYFLAQNGRGLGDTA EEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHEECCCCCCCCCC QDMIVYGDKMYIAVYGESTIEVTDLKAKSIKQVKTEGQPRYMVSEGGKVYISYYNGYVAR CCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCEEEE LDTASLEVEAKVKVGRNPEQLAVSSNKLFVSNSGGMDYSTEVGYDKTVSVVDLSTFTEIK EECCEEEEEEEEEECCCHHHEEEECCEEEEECCCCCCEECCCCCCCEEEEEEEHHHHCEE KLDVVLNPTRIQADEQGNVYVVSMGNYADIPNTVQKINTETYEVTSLTNCPNATEMAYED EEEEEECCCEEEECCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEECC GKLFLFYAQWGMSSPAFLTFDTKSQSAGTSFITDGTSIQSPYSISAVGGNVYVAESDYKN CCEEEEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCC NGDIYCFGGDGKLFKKFEAGLNPMKVVLAQKDNI CCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA