| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010000
Identifier: 150010000
GI number: 150010000
Start: 4161281
End: 4162399
Strand: Direct
Name: 150010000
Synonym: BDI_3419
Alternate gene names: NA
Gene position: 4161281-4162399 (Clockwise)
Preceding gene: 150009999
Following gene: 150010001
Centisome position: 86.49
GC content: 43.52
Gene sequence:
>1119_bases ATGCGATTACTGATTCTCTTAGGGTTCGCTTTCTGGATGGTGGCATGTACGCCATCCGGAAAGCAAACTTCTTCCAAGGA AGCTCTTTCCTCTGATAGAATTCAATATGCCCAAGGTTTCACGGTTCAGCGCTTTGATACCTATACAATGGTGGAAGTTC GTGATCCGTGGGATAGTACTCGTCTGCTTCAACGCTATTTATTGGTAGACCGGACAAAGTCGGTTCCTGGCGGATTACCC AAAGGGACGATCGTGAAGGTCCCGGTAAAAGATATTGTGGTTTATACTTCTGTTCATGCGGCTATTATTGATCAATTGCA CGAAATCAATAAGGTTATAGGTGTTTGTGAGCCTCGTTATATGGATACTCCTGCCATACAAGAGGGTATACAGGCCGGAA GAATCGCTGATTTAGGTGAGGCTACCTCTCCGAATATAGAGAAAATGATAGAGATCGGTGCGGAACTCGTGATAGCTTCC CCGTTTCAGAACAGTAGTTATGGGCCTGTCGAGAAGATAGGGATACCCATTATCGAAGGAGCCGACTATATGGAGGCATT TCCTTTGGGGCGCACGGAGTGGATTCGCTTTTATGGTTTGCTATTCGGAAAGGAAGAGATGGCCGATTCTATATTTAAAG AAACAGAGCAAGCCTATTTGTCCCTAAAGAACTTAACCGTGAATATAGATAAGCGTCCTACTGTTTTGTCGGAGAAAAAG TTCGGTTCCTCATGGTATATACCGGCTGGAGATAGTTATATGGCCCATCTTTTCGAGGATGCAGGAGCCGATTATATGTT TAAGGATTTACCGGGTGCCGGAAGTACCCCCTTAGCGTTTGAGACCGTGTTTGATAAAGCGATCCATGCGGATATTTGGC TTGTTAAATATAATCAGTCTTCCGAGATGACCTATAACGATTTACGCTCCGAATATACTCCCTACGAGAATTTCGACGCT TTTAAAAAACAACGGATTTATACCTGTAATACAGGGATAGTTCCTTATTACGAGGAATTCCCATTACATCCGGAATATCT ATTGAAAGATTTAATCTGGATTTTCCATCCGGAGCTAGTACCCGGATATTCTCCCCGTTATTTTAGTAAAATGCCCTGA
Upstream 100 bases:
>100_bases GCGATATTTATTGTTTCGGAGGTGACGGTAAATTGTTCAAGAAGTTTGAGGCCGGTTTAAATCCCATGAAAGTAGTCCTC GCTCAAAAAGATAATATCTA
Downstream 100 bases:
>100_bases TTGTCTTAAAGGTTTCATATCTTTGTTGAAATGTCGTTACTAGACAAATAAAGGTATTAGACTATGAAGATAAAAAAGGT ATATGTTGATGTTTTAACTG
Product: iron(III) ABC transporter periplasmic iron-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRLLILLGFAFWMVACTPSGKQTSSKEALSSDRIQYAQGFTVQRFDTYTMVEVRDPWDSTRLLQRYLLVDRTKSVPGGLP KGTIVKVPVKDIVVYTSVHAAIIDQLHEINKVIGVCEPRYMDTPAIQEGIQAGRIADLGEATSPNIEKMIEIGAELVIAS PFQNSSYGPVEKIGIPIIEGADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDKRPTVLSEKK FGSSWYIPAGDSYMAHLFEDAGADYMFKDLPGAGSTPLAFETVFDKAIHADIWLVKYNQSSEMTYNDLRSEYTPYENFDA FKKQRIYTCNTGIVPYYEEFPLHPEYLLKDLIWIFHPELVPGYSPRYFSKMP
Sequences:
>Translated_372_residues MRLLILLGFAFWMVACTPSGKQTSSKEALSSDRIQYAQGFTVQRFDTYTMVEVRDPWDSTRLLQRYLLVDRTKSVPGGLP KGTIVKVPVKDIVVYTSVHAAIIDQLHEINKVIGVCEPRYMDTPAIQEGIQAGRIADLGEATSPNIEKMIEIGAELVIAS PFQNSSYGPVEKIGIPIIEGADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDKRPTVLSEKK FGSSWYIPAGDSYMAHLFEDAGADYMFKDLPGAGSTPLAFETVFDKAIHADIWLVKYNQSSEMTYNDLRSEYTPYENFDA FKKQRIYTCNTGIVPYYEEFPLHPEYLLKDLIWIFHPELVPGYSPRYFSKMP >Mature_372_residues MRLLILLGFAFWMVACTPSGKQTSSKEALSSDRIQYAQGFTVQRFDTYTMVEVRDPWDSTRLLQRYLLVDRTKSVPGGLP KGTIVKVPVKDIVVYTSVHAAIIDQLHEINKVIGVCEPRYMDTPAIQEGIQAGRIADLGEATSPNIEKMIEIGAELVIAS PFQNSSYGPVEKIGIPIIEGADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDKRPTVLSEKK FGSSWYIPAGDSYMAHLFEDAGADYMFKDLPGAGSTPLAFETVFDKAIHADIWLVKYNQSSEMTYNDLRSEYTPYENFDA FKKQRIYTCNTGIVPYYEEFPLHPEYLLKDLIWIFHPELVPGYSPRYFSKMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 42275; Mature: 42275
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLILLGFAFWMVACTPSGKQTSSKEALSSDRIQYAQGFTVQRFDTYTMVEVRDPWDST CEEHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCHH RLLQRYLLVDRTKSVPGGLPKGTIVKVPVKDIVVYTSVHAAIIDQLHEINKVIGVCEPRY HHHHHHHHHHCCCCCCCCCCCCCEEEECHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCC MDTPAIQEGIQAGRIADLGEATSPNIEKMIEIGAELVIASPFQNSSYGPVEKIGIPIIEG CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEEECC ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDKRPTVLSEKK CCHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEECHHC FGSSWYIPAGDSYMAHLFEDAGADYMFKDLPGAGSTPLAFETVFDKAIHADIWLVKYNQS CCCEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCC SEMTYNDLRSEYTPYENFDAFKKQRIYTCNTGIVPYYEEFPLHPEYLLKDLIWIFHPELV CCCCHHHHHHHCCCCCCHHHHHHCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC PGYSPRYFSKMP CCCCCCCCCCCC >Mature Secondary Structure MRLLILLGFAFWMVACTPSGKQTSSKEALSSDRIQYAQGFTVQRFDTYTMVEVRDPWDST CEEHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCHH RLLQRYLLVDRTKSVPGGLPKGTIVKVPVKDIVVYTSVHAAIIDQLHEINKVIGVCEPRY HHHHHHHHHHCCCCCCCCCCCCCEEEECHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCC MDTPAIQEGIQAGRIADLGEATSPNIEKMIEIGAELVIASPFQNSSYGPVEKIGIPIIEG CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEEECC ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDKRPTVLSEKK CCHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECEEEEECCCCCEECHHC FGSSWYIPAGDSYMAHLFEDAGADYMFKDLPGAGSTPLAFETVFDKAIHADIWLVKYNQS CCCEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCC SEMTYNDLRSEYTPYENFDAFKKQRIYTCNTGIVPYYEEFPLHPEYLLKDLIWIFHPELV CCCCHHHHHHHCCCCCCHHHHHHCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC PGYSPRYFSKMP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]