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The map label for this gene is ycjS [C]

Identifier: 150009784

GI number: 150009784

Start: 3872720

End: 3874156

Strand: Reverse

Name: ycjS [C]

Synonym: BDI_3200

Alternate gene names: 150009784

Gene position: 3874156-3872720 (Counterclockwise)

Preceding gene: 150009787

Following gene: 150009781

Centisome position: 80.52

GC content: 50.8

Gene sequence:

>1437_bases
ATGAAATCAGAAGAAATCTCACGCCGCTCGTTCCTTAAGCGAGCGCTAGCCTTATCGGCAGTATCGGCCATCCCGTCGTT
CTGGACACCCGCCCACGGACGTGTTCTACCTACTTCCCCGCTAATCAGCGCTAATGACCGGGTAAATATAGCGTTCATCG
GCATCGGACAACGAGGGGGCGAGATCGCCAAGGAATTGTATAACACAGGTCTGTGTAACGTGGTAGCTCTCTGCGACGTG
GACATGGGAGCCCCTCACACGCAAGAGATTATCAACATGTTCCCGAAAGCGGCCCGTTTTCAGGACTTCCGCACGATGTT
CGACCGGATGGCGGACAAGATCGATGCCGTCAGCGTAGGCGTGCCGGATCATTCCCACTTCCCGATCACGATCGAGGCGA
TGGCGCACGGCAAACATGTATATGTAGAGAAACCGATGGCCCGCACGTTCCAAGAAATAGAGATCATGATGCGTGGAGCG
AAGAAATACGGCGTTGTCACCCAAATGGGTAACCAAGGACATTCCGAGGCGAACTATTTCCAATTCAAGGCATGGAAAGA
GGCCGGTATTATCAAGGATGTTACCGCCATTACCGCCCATATGAATAATCCGCGTCGCTGGCACGGATGGAACCCGAATA
TTAGGCATATGCCTATGGGAGAACCGGTTCCCGAGACGATGGATTGGGACACATGGATCGGCGTAGCTCAATATCATGAT
TACAACCATGACTACCATTTGGGACAATGGCGTTGTTGGTACGACTTTGGAATGGGTGTCTTAGGAGACTGGGGAGCGCA
CATTTTGGATACGGCACATGAATTCCTAGATTTAGGATTGCCTACAGAAATAAATCCGCTTTATTTGAAAGACCATAACC
CGTTCTTCTTCCCGATGTCATCCACCCTTTTGTTTAAATTCCCGGAAAGAGGGAATATGCCGGCCGTGGATATCACTTGG
TACGATGGACTGGACAATATCCCCTCTGTCCCGGAAGGTTACGGTGTTTCCGAACTTGACCCGAATATCCCGACCGTAGC
CGGCGGCAAGATACAACCGGCGAAGTTGAACCCGGGCAAGGAAATCTACTCGAAAGAATTAACCTTCAAGGGTGGTTCTC
ATGGAAGTACCTTATCTATCATCCCGGATGAGAAAGCGAAAGAGATGGAATCCCGCTTACCGGAAGTGCCGAAAAGCCCG
TCTAACCATTTCGCAAACTTCCTGCTCAGTTGTATGGGTAAGGAGAAAACCCGCTCACCGTTCTCTATCGCCGGCCCATT
AAGTCAGGTATTCTGTCTCGGCGTATTAAGCCAGCGCTTGAACCGCAAGCTCGTCTTCGACCGTGACACGAAACAGATCA
CGAACGATCCGGAGGCGAATAAGATGCTATGTGGAGTACCGCCTCGCAAAGGATGGGAACAATATTATACCATTTAA

Upstream 100 bases:

>100_bases
AAAGTAAATGATTTTTTCCGTAACTATAGAAAGTTTTGTATATTTACGACGTAAATCGTTAGTGTTTGCGCAAACAGTAT
AATTTAAACAAGATAATACC

Downstream 100 bases:

>100_bases
TTGAAACATGGAGAATTGAAAGTTATTCGCTCATCGCTTTAACTTTCAATTCTCTCATATAGTTTATAAGCCTATTTGCT
ACAACATCTACAACTATCCC

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKSEEISRRSFLKRALALSAVSAIPSFWTPAHGRVLPTSPLISANDRVNIAFIGIGQRGGEIAKELYNTGLCNVVALCDV
DMGAPHTQEIINMFPKAARFQDFRTMFDRMADKIDAVSVGVPDHSHFPITIEAMAHGKHVYVEKPMARTFQEIEIMMRGA
KKYGVVTQMGNQGHSEANYFQFKAWKEAGIIKDVTAITAHMNNPRRWHGWNPNIRHMPMGEPVPETMDWDTWIGVAQYHD
YNHDYHLGQWRCWYDFGMGVLGDWGAHILDTAHEFLDLGLPTEINPLYLKDHNPFFFPMSSTLLFKFPERGNMPAVDITW
YDGLDNIPSVPEGYGVSELDPNIPTVAGGKIQPAKLNPGKEIYSKELTFKGGSHGSTLSIIPDEKAKEMESRLPEVPKSP
SNHFANFLLSCMGKEKTRSPFSIAGPLSQVFCLGVLSQRLNRKLVFDRDTKQITNDPEANKMLCGVPPRKGWEQYYTI

Sequences:

>Translated_478_residues
MKSEEISRRSFLKRALALSAVSAIPSFWTPAHGRVLPTSPLISANDRVNIAFIGIGQRGGEIAKELYNTGLCNVVALCDV
DMGAPHTQEIINMFPKAARFQDFRTMFDRMADKIDAVSVGVPDHSHFPITIEAMAHGKHVYVEKPMARTFQEIEIMMRGA
KKYGVVTQMGNQGHSEANYFQFKAWKEAGIIKDVTAITAHMNNPRRWHGWNPNIRHMPMGEPVPETMDWDTWIGVAQYHD
YNHDYHLGQWRCWYDFGMGVLGDWGAHILDTAHEFLDLGLPTEINPLYLKDHNPFFFPMSSTLLFKFPERGNMPAVDITW
YDGLDNIPSVPEGYGVSELDPNIPTVAGGKIQPAKLNPGKEIYSKELTFKGGSHGSTLSIIPDEKAKEMESRLPEVPKSP
SNHFANFLLSCMGKEKTRSPFSIAGPLSQVFCLGVLSQRLNRKLVFDRDTKQITNDPEANKMLCGVPPRKGWEQYYTI
>Mature_478_residues
MKSEEISRRSFLKRALALSAVSAIPSFWTPAHGRVLPTSPLISANDRVNIAFIGIGQRGGEIAKELYNTGLCNVVALCDV
DMGAPHTQEIINMFPKAARFQDFRTMFDRMADKIDAVSVGVPDHSHFPITIEAMAHGKHVYVEKPMARTFQEIEIMMRGA
KKYGVVTQMGNQGHSEANYFQFKAWKEAGIIKDVTAITAHMNNPRRWHGWNPNIRHMPMGEPVPETMDWDTWIGVAQYHD
YNHDYHLGQWRCWYDFGMGVLGDWGAHILDTAHEFLDLGLPTEINPLYLKDHNPFFFPMSSTLLFKFPERGNMPAVDITW
YDGLDNIPSVPEGYGVSELDPNIPTVAGGKIQPAKLNPGKEIYSKELTFKGGSHGSTLSIIPDEKAKEMESRLPEVPKSP
SNHFANFLLSCMGKEKTRSPFSIAGPLSQVFCLGVLSQRLNRKLVFDRDTKQITNDPEANKMLCGVPPRKGWEQYYTI

Specific function: Glycosidase [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 53812; Mature: 53812

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEEISRRSFLKRALALSAVSAIPSFWTPAHGRVLPTSPLISANDRVNIAFIGIGQRGG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
EIAKELYNTGLCNVVALCDVDMGAPHTQEIINMFPKAARFQDFRTMFDRMADKIDAVSVG
HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEC
VPDHSHFPITIEAMAHGKHVYVEKPMARTFQEIEIMMRGAKKYGVVTQMGNQGHSEANYF
CCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEE
QFKAWKEAGIIKDVTAITAHMNNPRRWHGWNPNIRHMPMGEPVPETMDWDTWIGVAQYHD
EEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHCC
YNHDYHLGQWRCWYDFGMGVLGDWGAHILDTAHEFLDLGLPTEINPLYLKDHNPFFFPMS
CCCCEECCCEEEEHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECC
STLLFKFPERGNMPAVDITWYDGLDNIPSVPEGYGVSELDPNIPTVAGGKIQPAKLNPGK
CEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCH
EIYSKELTFKGGSHGSTLSIIPDEKAKEMESRLPEVPKSPSNHFANFLLSCMGKEKTRSP
HHHHHEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCC
FSIAGPLSQVFCLGVLSQRLNRKLVFDRDTKQITNDPEANKMLCGVPPRKGWEQYYTI
CEECCHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEECCCCCCCCHHHCCC
>Mature Secondary Structure
MKSEEISRRSFLKRALALSAVSAIPSFWTPAHGRVLPTSPLISANDRVNIAFIGIGQRGG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
EIAKELYNTGLCNVVALCDVDMGAPHTQEIINMFPKAARFQDFRTMFDRMADKIDAVSVG
HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEC
VPDHSHFPITIEAMAHGKHVYVEKPMARTFQEIEIMMRGAKKYGVVTQMGNQGHSEANYF
CCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEE
QFKAWKEAGIIKDVTAITAHMNNPRRWHGWNPNIRHMPMGEPVPETMDWDTWIGVAQYHD
EEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHCC
YNHDYHLGQWRCWYDFGMGVLGDWGAHILDTAHEFLDLGLPTEINPLYLKDHNPFFFPMS
CCCCEECCCEEEEHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECC
STLLFKFPERGNMPAVDITWYDGLDNIPSVPEGYGVSELDPNIPTVAGGKIQPAKLNPGK
CEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCH
EIYSKELTFKGGSHGSTLSIIPDEKAKEMESRLPEVPKSPSNHFANFLLSCMGKEKTRSP
HHHHHEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCC
FSIAGPLSQVFCLGVLSQRLNRKLVFDRDTKQITNDPEANKMLCGVPPRKGWEQYYTI
CEECCHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA