| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009779
Identifier: 150009779
GI number: 150009779
Start: 3865862
End: 3866878
Strand: Reverse
Name: 150009779
Synonym: BDI_3195
Alternate gene names: NA
Gene position: 3866878-3865862 (Counterclockwise)
Preceding gene: 150009780
Following gene: 150009775
Centisome position: 80.37
GC content: 46.41
Gene sequence:
>1017_bases ATGAAACGATACCTTATATATATATGTATATCTCTCGGATTCCTGTTTACCGGATGTGAGAAATCGGACGAATACGTGGC CTCCCCACAGGAGAACTTTGAGGCGCTTTGGAAAATATTGGATGAGAATTACTGCTTCTTCGAATACAAGGACATTGATT GGAACGAGGTTCACGACCGTTATAAGACGCAGATAAGCGATACGATGAACCAATACGTCCTATTTGACGTATTAGGCGAT ATGCTAAACGAGCTGAAAGACGGGCATACCAATTTGATATCCACCTTCAATATGTCCCGCTATTGGGATTGGTATCTCGA TTATCCGGATAATTTCGACTCGGACATACAAGAGAATTATCTCGGAAGGAACTACTCGATCGCCGGAGGACTTAAATACA CGACATTGAGTGACGGGCAGATCGGGTATATTTACTACGGTAGCTTTTCCAGTTCGGCCGGCGAAAGCGGTTTGGATCAC ATATTCTATCAATTCAAGGATTGCAAAGGTTTGATCTTCGATATCCGGGATAATGGCGGTGGCATGTTATCAAACGCCGA TCGCATCGCTTCCCGTTTCTTGGAGGAAAAGATACTGACCGGCTATATCCAACATAAGACGGGTAAAGGGCACGATGACT TTTCCGAACCTTATCCCCTTTATCTCTCACCTTCCGAGCGTATCCGCTGGTTACGCCCTGTTGTGGTCTTAACGAATCGT CATTGCTACAGCGCCGCCAACGATTTCGTGCAGAAAGTACGCATGATGCCTTATGTAACGACGATGGGAGATCGCACCGG AGGCGGTAGTGGCTTCCCCTTTAACTCCGAGTTGCCCAACGGCTGGGGTGTCCGTTTCTCCGCGTCTCCCATGCTAGATG TAAACAAACAGCATACGGAATTCGGTATCGATCCTACATATAAGGTTTCTATGACCCAAGAAGATATCGAGAAAGGTAAA GATACGATTATCGAGGCGGCGATCACCCACCTCTTGTCCGAGACCGAGAAGAAATAA
Upstream 100 bases:
>100_bases CTTTTATGATCGGCCTCGTGAAAGAATTTATCTCTTTCGGAGGAAAACGCCTAAAGAATACCCAGCGGTTCAGAAGCGCT TATTATTAAAAGGAAATCAA
Downstream 100 bases:
>100_bases GGTTTCGCTAAAAAAACAACGCAAATATTTGCAAGTTTATAAAAAAGCATTACCTTTGCACACGATTCCAATGCGGCTGT GGTGTAATTGGTAGCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S; Peptidase; Periplasmic Protease; Carboxyl-Terminal Protease-Related Protein; S41 Family Protease; Lipoprotein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKRYLIYICISLGFLFTGCEKSDEYVASPQENFEALWKILDENYCFFEYKDIDWNEVHDRYKTQISDTMNQYVLFDVLGD MLNELKDGHTNLISTFNMSRYWDWYLDYPDNFDSDIQENYLGRNYSIAGGLKYTTLSDGQIGYIYYGSFSSSAGESGLDH IFYQFKDCKGLIFDIRDNGGGMLSNADRIASRFLEEKILTGYIQHKTGKGHDDFSEPYPLYLSPSERIRWLRPVVVLTNR HCYSAANDFVQKVRMMPYVTTMGDRTGGGSGFPFNSELPNGWGVRFSASPMLDVNKQHTEFGIDPTYKVSMTQEDIEKGK DTIIEAAITHLLSETEKK
Sequences:
>Translated_338_residues MKRYLIYICISLGFLFTGCEKSDEYVASPQENFEALWKILDENYCFFEYKDIDWNEVHDRYKTQISDTMNQYVLFDVLGD MLNELKDGHTNLISTFNMSRYWDWYLDYPDNFDSDIQENYLGRNYSIAGGLKYTTLSDGQIGYIYYGSFSSSAGESGLDH IFYQFKDCKGLIFDIRDNGGGMLSNADRIASRFLEEKILTGYIQHKTGKGHDDFSEPYPLYLSPSERIRWLRPVVVLTNR HCYSAANDFVQKVRMMPYVTTMGDRTGGGSGFPFNSELPNGWGVRFSASPMLDVNKQHTEFGIDPTYKVSMTQEDIEKGK DTIIEAAITHLLSETEKK >Mature_338_residues MKRYLIYICISLGFLFTGCEKSDEYVASPQENFEALWKILDENYCFFEYKDIDWNEVHDRYKTQISDTMNQYVLFDVLGD MLNELKDGHTNLISTFNMSRYWDWYLDYPDNFDSDIQENYLGRNYSIAGGLKYTTLSDGQIGYIYYGSFSSSAGESGLDH IFYQFKDCKGLIFDIRDNGGGMLSNADRIASRFLEEKILTGYIQHKTGKGHDDFSEPYPLYLSPSERIRWLRPVVVLTNR HCYSAANDFVQKVRMMPYVTTMGDRTGGGSGFPFNSELPNGWGVRFSASPMLDVNKQHTEFGIDPTYKVSMTQEDIEKGK DTIIEAAITHLLSETEKK
Specific function: Unknown
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38966; Mature: 38966
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLIYICISLGFLFTGCEKSDEYVASPQENFEALWKILDENYCFFEYKDIDWNEVHDR CCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH YKTQISDTMNQYVLFDVLGDMLNELKDGHTNLISTFNMSRYWDWYLDYPDNFDSDIQENY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH LGRNYSIAGGLKYTTLSDGQIGYIYYGSFSSSAGESGLDHIFYQFKDCKGLIFDIRDNGG CCCCEEEECCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCC GMLSNADRIASRFLEEKILTGYIQHKTGKGHDDFSEPYPLYLSPSERIRWLRPVVVLTNR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHEEEEECC HCYSAANDFVQKVRMMPYVTTMGDRTGGGSGFPFNSELPNGWGVRFSASPMLDVNKQHTE CHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH FGIDPTYKVSMTQEDIEKGKDTIIEAAITHLLSETEKK CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRYLIYICISLGFLFTGCEKSDEYVASPQENFEALWKILDENYCFFEYKDIDWNEVHDR CCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH YKTQISDTMNQYVLFDVLGDMLNELKDGHTNLISTFNMSRYWDWYLDYPDNFDSDIQENY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH LGRNYSIAGGLKYTTLSDGQIGYIYYGSFSSSAGESGLDHIFYQFKDCKGLIFDIRDNGG CCCCEEEECCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCC GMLSNADRIASRFLEEKILTGYIQHKTGKGHDDFSEPYPLYLSPSERIRWLRPVVVLTNR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHEEEEECC HCYSAANDFVQKVRMMPYVTTMGDRTGGGSGFPFNSELPNGWGVRFSASPMLDVNKQHTE CHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH FGIDPTYKVSMTQEDIEKGKDTIIEAAITHLLSETEKK CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA