| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009780
Identifier: 150009780
GI number: 150009780
Start: 3866890
End: 3867759
Strand: Reverse
Name: 150009780
Synonym: BDI_3196
Alternate gene names: NA
Gene position: 3867759-3866890 (Counterclockwise)
Preceding gene: 150009781
Following gene: 150009779
Centisome position: 80.39
GC content: 46.9
Gene sequence:
>870_bases ATGAAAGCTATCACCTGTTTGATTGGTTTGTTCCTGCTGTTTCTCGCGTCACCGGCCAAGGCCCAGTCCGATGGAGACGA GATCCCTTGGTCTATCAACAGCGGGACCATGGTCGGTATAGGAAGCTACAATCTAATGGACACCTATTTATCTCCCAGCA TGGAAGATAAGAAATATACAGGCCCCGGATTACGGGTAATGAATGAACGGATGAAGAGGGTCCGACTGGCAAACTATCGG GTATCCAGACAGCAAATCATAAGCGTCGATCTGGCTAGCACGGATAATGCTGCCTCTACCGCTACGGATTTCGCGGGCTT TATCGATTATACGTTGGGTTACTATTATCATTTGCCCACGGTATTGCCGGATTTAAAGCTTCTGGCGGGTGGTGCCGTGC ATGGCATGGGTGGTTTTATATACAATACCCGCAACGGAAATAACCCGGCCTCGGCGAAAGCGGATATCGATTTGAACATC TCCGCCATGGCGATCTATAAGTTACGCATCAAGGAATATCCCATGACGCTACGCTACCAGTTCACGATCCCCTTCGCCGG TGTTTTATTCTCCCCCCATTACGGGCAATCGTATTACGAGATCTTCAACCTAGGGAATGCCTCGGGAGTGGTGCAATTCA ATTCCTTCCATAATAAATTCGCCATGAAGAACTTTTTCACGGTAGATTTCCCGGTTTGTAATTTTACGATACGGGCAGGT TACCTAAACAGCTCTTACCGTACAGATGTCAATGGGATACAGTCTCATATAATCTCTCACTCTTTTATGATCGGCCTCGT GAAAGAATTTATCTCTTTCGGAGGAAAACGCCTAAAGAATACCCAGCGGTTCAGAAGCGCTTATTATTAA
Upstream 100 bases:
>100_bases CGAAGGCAATGAGGAGGAAAACGACACTGACGACGGGCAGAGTACCACGGATATTATCGATGAAATTACGGGACAGATGA AATTGTTTGACGAATAACCT
Downstream 100 bases:
>100_bases AAGGAAATCAAATGAAACGATACCTTATATATATATGTATATCTCTCGGATTCCTGTTTACCGGATGTGAGAAATCGGAC GAATACGTGGCCTCCCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKAITCLIGLFLLFLASPAKAQSDGDEIPWSINSGTMVGIGSYNLMDTYLSPSMEDKKYTGPGLRVMNERMKRVRLANYR VSRQQIISVDLASTDNAASTATDFAGFIDYTLGYYYHLPTVLPDLKLLAGGAVHGMGGFIYNTRNGNNPASAKADIDLNI SAMAIYKLRIKEYPMTLRYQFTIPFAGVLFSPHYGQSYYEIFNLGNASGVVQFNSFHNKFAMKNFFTVDFPVCNFTIRAG YLNSSYRTDVNGIQSHIISHSFMIGLVKEFISFGGKRLKNTQRFRSAYY
Sequences:
>Translated_289_residues MKAITCLIGLFLLFLASPAKAQSDGDEIPWSINSGTMVGIGSYNLMDTYLSPSMEDKKYTGPGLRVMNERMKRVRLANYR VSRQQIISVDLASTDNAASTATDFAGFIDYTLGYYYHLPTVLPDLKLLAGGAVHGMGGFIYNTRNGNNPASAKADIDLNI SAMAIYKLRIKEYPMTLRYQFTIPFAGVLFSPHYGQSYYEIFNLGNASGVVQFNSFHNKFAMKNFFTVDFPVCNFTIRAG YLNSSYRTDVNGIQSHIISHSFMIGLVKEFISFGGKRLKNTQRFRSAYY >Mature_289_residues MKAITCLIGLFLLFLASPAKAQSDGDEIPWSINSGTMVGIGSYNLMDTYLSPSMEDKKYTGPGLRVMNERMKRVRLANYR VSRQQIISVDLASTDNAASTATDFAGFIDYTLGYYYHLPTVLPDLKLLAGGAVHGMGGFIYNTRNGNNPASAKADIDLNI SAMAIYKLRIKEYPMTLRYQFTIPFAGVLFSPHYGQSYYEIFNLGNASGVVQFNSFHNKFAMKNFFTVDFPVCNFTIRAG YLNSSYRTDVNGIQSHIISHSFMIGLVKEFISFGGKRLKNTQRFRSAYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32355; Mature: 32355
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAITCLIGLFLLFLASPAKAQSDGDEIPWSINSGTMVGIGSYNLMDTYLSPSMEDKKYT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCCHHHHHHCCCCCCCCCCC GPGLRVMNERMKRVRLANYRVSRQQIISVDLASTDNAASTATDFAGFIDYTLGYYYHLPT CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLPDLKLLAGGAVHGMGGFIYNTRNGNNPASAKADIDLNISAMAIYKLRIKEYPMTLRYQ HCCCHHHHCCCCEECCCCEEEECCCCCCCCCCEEEEEECEEEEEEEEEEEECCCEEEEEE FTIPFAGVLFSPHYGQSYYEIFNLGNASGVVQFNSFHNKFAMKNFFTVDFPVCNFTIRAG EECCCHHEEECCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHCCEEEEEECEEEEEEEEE YLNSSYRTDVNGIQSHIISHSFMIGLVKEFISFGGKRLKNTQRFRSAYY ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKAITCLIGLFLLFLASPAKAQSDGDEIPWSINSGTMVGIGSYNLMDTYLSPSMEDKKYT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCCHHHHHHCCCCCCCCCCC GPGLRVMNERMKRVRLANYRVSRQQIISVDLASTDNAASTATDFAGFIDYTLGYYYHLPT CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLPDLKLLAGGAVHGMGGFIYNTRNGNNPASAKADIDLNISAMAIYKLRIKEYPMTLRYQ HCCCHHHHCCCCEECCCCEEEECCCCCCCCCCEEEEEECEEEEEEEEEEEECCCEEEEEE FTIPFAGVLFSPHYGQSYYEIFNLGNASGVVQFNSFHNKFAMKNFFTVDFPVCNFTIRAG EECCCHHEEECCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHCCEEEEEECEEEEEEEEE YLNSSYRTDVNGIQSHIISHSFMIGLVKEFISFGGKRLKNTQRFRSAYY ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA