| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is eda [H]
Identifier: 150009770
GI number: 150009770
Start: 3857029
End: 3857703
Strand: Reverse
Name: eda [H]
Synonym: BDI_3185
Alternate gene names: 150009770
Gene position: 3857703-3857029 (Counterclockwise)
Preceding gene: 150009771
Following gene: 150009769
Centisome position: 80.18
GC content: 50.07
Gene sequence:
>675_bases ATGGCTCAATTCAATAAAATACAAACATTACAGGCTATCATCCAAACCGGAATGGTGCCCGTTTATTATAATAAAGAGGT AGAGATCGCAAAACAAGTTGTAAAAGCCTGTTACGAGGGAGGCGTCAGAGCCTTCGAGTTTACTAACCGGGGAGATTTCG CCCACGAGGTATTTGGCGAGCTGGTAAAATACGCCGCCAAGGAATGCCCGGAATTAGTATTGGGCGTAGGTTCTATCGTA GACCCGGCCACAGCCGCCTTATTCATACAGCTAGGCGCAAACTTCGTAGTCGGCCCGTTGTTCAACCCGGAGATAGCGAA GATATGTAACCGTCGCCTCATCCCTTATACGCCCGGCTGCGGTTCCGTATCCGAGATCGGCTTTGCCCAAGAAGTTGGTT GCGACCTTTGCAAGATATTCCCCGCCGGAAATGTAGGAGGTCCCTCATTTGTCAAGAACATAAAGGCACCCATGCCATGG ACCCTAATCATGGCTACCGGTGCCGTGGAGCCGACAGAGGAGAATCTATCCGCTTGGTTCAAGGCCGGCGTGACCTGCGT AGGAATGGGATCCAAACTCTTCCCCAAAGAAGCGATAGCGGGAAACGATTGGCAATCCATTACCGATTTATGCCGCAACG CCTTATCTATCATTCAAAAGTATCGCCAAGTATGA
Upstream 100 bases:
>100_bases AGTAACCGTAGAGGAAGTAGAAAAACTCATGTCCGGCGACACCTCCGGCCGTGTCTCCCGCTAATTTTCAATTCTCAACT TTCAATTTTTAATTCCCAAT
Downstream 100 bases:
>100_bases AAAACTTTTTAGATCAAGATTTCTTGCTCCAAACCGACACGGCCCGTGAGTTATATCACGAGCATGCGGCGAAGATGCCC ATCATTGATTACCATTGCCA
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAQFNKIQTLQAIIQTGMVPVYYNKEVEIAKQVVKACYEGGVRAFEFTNRGDFAHEVFGELVKYAAKECPELVLGVGSIV DPATAALFIQLGANFVVGPLFNPEIAKICNRRLIPYTPGCGSVSEIGFAQEVGCDLCKIFPAGNVGGPSFVKNIKAPMPW TLIMATGAVEPTEENLSAWFKAGVTCVGMGSKLFPKEAIAGNDWQSITDLCRNALSIIQKYRQV
Sequences:
>Translated_224_residues MAQFNKIQTLQAIIQTGMVPVYYNKEVEIAKQVVKACYEGGVRAFEFTNRGDFAHEVFGELVKYAAKECPELVLGVGSIV DPATAALFIQLGANFVVGPLFNPEIAKICNRRLIPYTPGCGSVSEIGFAQEVGCDLCKIFPAGNVGGPSFVKNIKAPMPW TLIMATGAVEPTEENLSAWFKAGVTCVGMGSKLFPKEAIAGNDWQSITDLCRNALSIIQKYRQV >Mature_223_residues AQFNKIQTLQAIIQTGMVPVYYNKEVEIAKQVVKACYEGGVRAFEFTNRGDFAHEVFGELVKYAAKECPELVLGVGSIVD PATAALFIQLGANFVVGPLFNPEIAKICNRRLIPYTPGCGSVSEIGFAQEVGCDLCKIFPAGNVGGPSFVKNIKAPMPWT LIMATGAVEPTEENLSAWFKAGVTCVGMGSKLFPKEAIAGNDWQSITDLCRNALSIIQKYRQV
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=189, Percent_Identity=31.7460317460317, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI48994954, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=8e-14,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.2.14 [H]
Molecular weight: Translated: 24260; Mature: 24129
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFNKIQTLQAIIQTGMVPVYYNKEVEIAKQVVKACYEGGVRAFEFTNRGDFAHEVFGE CCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH LVKYAAKECPELVLGVGSIVDPATAALFIQLGANFVVGPLFNPEIAKICNRRLIPYTPGC HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCC GSVSEIGFAQEVGCDLCKIFPAGNVGGPSFVKNIKAPMPWTLIMATGAVEPTEENLSAWF CCHHHCCCHHHHCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH KAGVTCVGMGSKLFPKEAIAGNDWQSITDLCRNALSIIQKYRQV HHCCEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQFNKIQTLQAIIQTGMVPVYYNKEVEIAKQVVKACYEGGVRAFEFTNRGDFAHEVFGE CCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH LVKYAAKECPELVLGVGSIVDPATAALFIQLGANFVVGPLFNPEIAKICNRRLIPYTPGC HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCC GSVSEIGFAQEVGCDLCKIFPAGNVGGPSFVKNIKAPMPWTLIMATGAVEPTEENLSAWF CCHHHCCCHHHHCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH KAGVTCVGMGSKLFPKEAIAGNDWQSITDLCRNALSIIQKYRQV HHCCEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]