| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is iolC [H]
Identifier: 150009771
GI number: 150009771
Start: 3857740
End: 3858783
Strand: Reverse
Name: iolC [H]
Synonym: BDI_3186
Alternate gene names: 150009771
Gene position: 3858783-3857740 (Counterclockwise)
Preceding gene: 150009772
Following gene: 150009770
Centisome position: 80.2
GC content: 52.2
Gene sequence:
>1044_bases ATGAGTAAGAAAGTCATAACTTTCGGAGAGATCATGCTTAGGCTGGCTACTCCGGACTATTTACGCTTTTGCCAAGCCAA TCAGTTCAACGCTACTTTTGGCGGAGGGGAAGCGAATGTCGCCGCCTCACTCGCCAACTATGGCATAGAGACTGAGTTTG TAACCCGTTTACCCCAAAATGACATCGCCCGTGCCTGCGTTATGGAATTACGCAAACAGGGTATCGGAACTTCCAAGATC ATTTACGGAGGGGAACGGTTAGGCATTTATTTTCTGGAGACCGGAGCGGTCGCTCGTGCCAGCAAGGTGGTATATGACCG GGCTCATTCTTCCATCGCCGAGATCCGACCGGGGATGATCGATTGGAACGAGGTATTCAAGGATGCCTCTTGGTTTCACT GGACAGGTATCACGCCAGCCATATCCGAAGGTGCCGCCAACGTATGCTTGGAAGCGATACAGGCGGCAAACCGATTGGGC ATCACGGTATCCTGCGACCTCAACTACCGGAAAAATCTCTGGAAATACGGTAAGACAGCCCATGAGGTCATGCCGGAACT AGTAGCCGGATGCGATATCATCCTAGGAAACGAGGAAGATGCCGAGAAAGTCTTCGGTATCAAGCCCGAAGGTTTTGACG CCGCCGCCACGGAAGGCGAGGTACACGCCGCCTCTTTCCAGTCGGTATGTACCCAATTAATGGCTCACTTCCCACGTGCC CGGAAAGTTATCATCACGCTAAGAGGCTCCATCAATGCCAATCATAACACATGGGGCGGAGTGCTATACGCCGACAACCG GTTGTACAAATCCCGCCGGTATGACATCACCCATATCGTAGATCGTGTAGGTGGAGGCGATTCTTTTATGGGAGGCCTTA TTTACGGTTTGCTCTCCTACCCCGGTGACGACCAGAAAGCCTTGGACTTCGCGGTAGCGGCTTCTTGCCTAAAGCACACA ATTTACGGAGACTTCAACCAAGTAACCGTAGAGGAAGTAGAAAAACTCATGTCCGGCGACACCTCCGGCCGTGTCTCCCG CTAA
Upstream 100 bases:
>100_bases GTCCGGGAGGTGGAATAAAAAAGCCTATGTTTTCGCACACACGCTATATATTATTCGAAATAAACCCTTACATTTGCGAA AAACATAATACTATACCACC
Downstream 100 bases:
>100_bases TTTTCAATTCTCAACTTTCAATTTTTAATTCCCAATATGGCTCAATTCAATAAAATACAAACATTACAGGCTATCATCCA AACCGGAATGGTGCCCGTTT
Product: putative gluconate kinase
Products: NA
Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase; DKG kinase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSKKVITFGEIMLRLATPDYLRFCQANQFNATFGGGEANVAASLANYGIETEFVTRLPQNDIARACVMELRKQGIGTSKI IYGGERLGIYFLETGAVARASKVVYDRAHSSIAEIRPGMIDWNEVFKDASWFHWTGITPAISEGAANVCLEAIQAANRLG ITVSCDLNYRKNLWKYGKTAHEVMPELVAGCDIILGNEEDAEKVFGIKPEGFDAAATEGEVHAASFQSVCTQLMAHFPRA RKVIITLRGSINANHNTWGGVLYADNRLYKSRRYDITHIVDRVGGGDSFMGGLIYGLLSYPGDDQKALDFAVAASCLKHT IYGDFNQVTVEEVEKLMSGDTSGRVSR
Sequences:
>Translated_347_residues MSKKVITFGEIMLRLATPDYLRFCQANQFNATFGGGEANVAASLANYGIETEFVTRLPQNDIARACVMELRKQGIGTSKI IYGGERLGIYFLETGAVARASKVVYDRAHSSIAEIRPGMIDWNEVFKDASWFHWTGITPAISEGAANVCLEAIQAANRLG ITVSCDLNYRKNLWKYGKTAHEVMPELVAGCDIILGNEEDAEKVFGIKPEGFDAAATEGEVHAASFQSVCTQLMAHFPRA RKVIITLRGSINANHNTWGGVLYADNRLYKSRRYDITHIVDRVGGGDSFMGGLIYGLLSYPGDDQKALDFAVAASCLKHT IYGDFNQVTVEEVEKLMSGDTSGRVSR >Mature_346_residues SKKVITFGEIMLRLATPDYLRFCQANQFNATFGGGEANVAASLANYGIETEFVTRLPQNDIARACVMELRKQGIGTSKII YGGERLGIYFLETGAVARASKVVYDRAHSSIAEIRPGMIDWNEVFKDASWFHWTGITPAISEGAANVCLEAIQAANRLGI TVSCDLNYRKNLWKYGKTAHEVMPELVAGCDIILGNEEDAEKVFGIKPEGFDAAATEGEVHAASFQSVCTQLMAHFPRAR KVIITLRGSINANHNTWGGVLYADNRLYKSRRYDITHIVDRVGGGDSFMGGLIYGLLSYPGDDQKALDFAVAASCLKHTI YGDFNQVTVEEVEKLMSGDTSGRVSR
Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR022841 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.92 [H]
Molecular weight: Translated: 38059; Mature: 37927
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKVITFGEIMLRLATPDYLRFCQANQFNATFGGGEANVAASLANYGIETEFVTRLPQN CCCCEEEHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCHH DIARACVMELRKQGIGTSKIIYGGERLGIYFLETGAVARASKVVYDRAHSSIAEIRPGMI HHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC DWNEVFKDASWFHWTGITPAISEGAANVCLEAIQAANRLGITVSCDLNYRKNLWKYGKTA CHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHH HEVMPELVAGCDIILGNEEDAEKVFGIKPEGFDAAATEGEVHAASFQSVCTQLMAHFPRA HHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RKVIITLRGSINANHNTWGGVLYADNRLYKSRRYDITHIVDRVGGGDSFMGGLIYGLLSY EEEEEEEECCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC PGDDQKALDFAVAASCLKHTIYGDFNQVTVEEVEKLMSGDTSGRVSR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKKVITFGEIMLRLATPDYLRFCQANQFNATFGGGEANVAASLANYGIETEFVTRLPQN CCCEEEHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCHH DIARACVMELRKQGIGTSKIIYGGERLGIYFLETGAVARASKVVYDRAHSSIAEIRPGMI HHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC DWNEVFKDASWFHWTGITPAISEGAANVCLEAIQAANRLGITVSCDLNYRKNLWKYGKTA CHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHH HEVMPELVAGCDIILGNEEDAEKVFGIKPEGFDAAATEGEVHAASFQSVCTQLMAHFPRA HHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RKVIITLRGSINANHNTWGGVLYADNRLYKSRRYDITHIVDRVGGGDSFMGGLIYGLLSY EEEEEEEECCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC PGDDQKALDFAVAASCLKHTIYGDFNQVTVEEVEKLMSGDTSGRVSR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA