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The map label for this gene is araJ [H]

Identifier: 150009560

GI number: 150009560

Start: 3559164

End: 3560312

Strand: Direct

Name: araJ [H]

Synonym: BDI_2973

Alternate gene names: 150009560

Gene position: 3559164-3560312 (Clockwise)

Preceding gene: 150009559

Following gene: 150009561

Centisome position: 73.97

GC content: 47.69

Gene sequence:

>1149_bases
ATGAAAAAAAGTTTGATCGCTTTAGCTTTCGGTACCCTTGGGCTGGGGATTGCCGAGTTCGTAATGATGGGTATCCTACC
CGACATCGCGAAAGATTTACACATCAGCATTGCTACAGCCGGGCATCTGATCTCAGCTTATGCACTAGGGGTTTGCGTAG
GCGCTCCCATGTTGATTATCGCCCGTAGATATCCATTAAAACACATTTTGCTTGTTTTAGTAGGGATTATGATGATCGGT
AATTTATGCGCCGCATTAGCGTCTAATTACTGGGTATTGATGATAGCCCGCTTCATCTCTGGATTGCCTCACGGAGCTTA
CTTCGGTGTTGGCTCCATCGTAGCCGAAAAGCTTGCTGATAAAGGAAGAGGCTCCGAGGCTGTCTCTATCATGATAGCGG
GGATGACGATCGCCAACCTATTCGGTGTCCCGTTGGGGACGGCCCTCAGCACCATGCTCTCGTGGCGTCTGACTTTCTTA
CTGGTTGGTTGCTGGGGCATAGCCATCTTATATTACATCTGGAGATGGGTACCTATGGTAGAGAACCTTCCGGATACTGG
CTTTAAAGGACAATTTCGTTTTCTTAAGACTCAAGCGCCATGGTTAATCCTAGGGGCGACAATGCTAGGTAACGGAGGTG
TATTTTGCTGGTATAGCTATATCAGCCCGCTATTGACACAAGTATCCGGCTTCTCGGCCGAAAGCCTTACTGTTTTAATG
GTATTGGCAGGTTTCGGTATGGTAGCGGGCAACTTGATCAGTGGCCGCCTATCCGATAAATATATGCCCGGACGGGTAGC
GGCCATAGCGCAAGGCATGATTTGCGTAGCCCTACTGCTCGTCTTCTTCTTGGCACAAATATCTTGGTTAAATGTCTTGC
TGATGTGTCTGTGTACGGCGGGATTATTCGCCGTCTCAAGCCCTCAACAAGTATTATTGATCCGTTACTCCAAAGGTGGA
GAGATGCTGGGAGCCGCCAGCGTACAAGTTGCGTTCAATTTAGGAAATGCTATCGGAGCTTATTGTGGTGGGTTACCATT
GGAGGTCGGCCTTGGTTATAAATATCCGGCCTTGATAGGTTCCGGATTCGCTTTTATCGGATTCTTGTTATTGACTTTCT
TTTACCGGAAATATGAGAGAACAACCTAA

Upstream 100 bases:

>100_bases
GAAACGCAAAACTTTCCCCTAAAAACATTCCGAAAAGCAAATAATAATGTATACTATACACTATATTTGCGCTCGAAAAG
ATTGTTGAGCATTTTAGGTT

Downstream 100 bases:

>100_bases
GTAAAAAATAACATTAGTAAAGAAGCCTATGAACAAACTCGTTAAAACATTATTAAACAAACAATCGATGAGGCAACCGG
TTAAGCATGAAGAGAAAGCC

Product: MFS transport protein AraJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKKSLIALAFGTLGLGIAEFVMMGILPDIAKDLHISIATAGHLISAYALGVCVGAPMLIIARRYPLKHILLVLVGIMMIG
NLCAALASNYWVLMIARFISGLPHGAYFGVGSIVAEKLADKGRGSEAVSIMIAGMTIANLFGVPLGTALSTMLSWRLTFL
LVGCWGIAILYYIWRWVPMVENLPDTGFKGQFRFLKTQAPWLILGATMLGNGGVFCWYSYISPLLTQVSGFSAESLTVLM
VLAGFGMVAGNLISGRLSDKYMPGRVAAIAQGMICVALLLVFFLAQISWLNVLLMCLCTAGLFAVSSPQQVLLIRYSKGG
EMLGAASVQVAFNLGNAIGAYCGGLPLEVGLGYKYPALIGSGFAFIGFLLLTFFYRKYERTT

Sequences:

>Translated_382_residues
MKKSLIALAFGTLGLGIAEFVMMGILPDIAKDLHISIATAGHLISAYALGVCVGAPMLIIARRYPLKHILLVLVGIMMIG
NLCAALASNYWVLMIARFISGLPHGAYFGVGSIVAEKLADKGRGSEAVSIMIAGMTIANLFGVPLGTALSTMLSWRLTFL
LVGCWGIAILYYIWRWVPMVENLPDTGFKGQFRFLKTQAPWLILGATMLGNGGVFCWYSYISPLLTQVSGFSAESLTVLM
VLAGFGMVAGNLISGRLSDKYMPGRVAAIAQGMICVALLLVFFLAQISWLNVLLMCLCTAGLFAVSSPQQVLLIRYSKGG
EMLGAASVQVAFNLGNAIGAYCGGLPLEVGLGYKYPALIGSGFAFIGFLLLTFFYRKYERTT
>Mature_382_residues
MKKSLIALAFGTLGLGIAEFVMMGILPDIAKDLHISIATAGHLISAYALGVCVGAPMLIIARRYPLKHILLVLVGIMMIG
NLCAALASNYWVLMIARFISGLPHGAYFGVGSIVAEKLADKGRGSEAVSIMIAGMTIANLFGVPLGTALSTMLSWRLTFL
LVGCWGIAILYYIWRWVPMVENLPDTGFKGQFRFLKTQAPWLILGATMLGNGGVFCWYSYISPLLTQVSGFSAESLTVLM
VLAGFGMVAGNLISGRLSDKYMPGRVAAIAQGMICVALLLVFFLAQISWLNVLLMCLCTAGLFAVSSPQQVLLIRYSKGG
EMLGAASVQVAFNLGNAIGAYCGGLPLEVGLGYKYPALIGSGFAFIGFLLLTFFYRKYERTT

Specific function: May be involved in either the transport or processing of arabinose polymers [H]

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=49.8694516971279, Blast_Score=357, Evalue=1e-99,
Organism=Escherichia coli, GI1787947, Length=379, Percent_Identity=35.6200527704486, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI1787808, Length=264, Percent_Identity=25, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI145693198, Length=376, Percent_Identity=23.6702127659574, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40923; Mature: 40923

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIALAFGTLGLGIAEFVMMGILPDIAKDLHISIATAGHLISAYALGVCVGAPMLII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHH
ARRYPLKHILLVLVGIMMIGNLCAALASNYWVLMIARFISGLPHGAYFGVGSIVAEKLAD
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KGRGSEAVSIMIAGMTIANLFGVPLGTALSTMLSWRLTFLLVGCWGIAILYYIWRWVPMV
CCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLPDTGFKGQFRFLKTQAPWLILGATMLGNGGVFCWYSYISPLLTQVSGFSAESLTVLM
HCCCCCCCCCCEEEEECCCCEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHH
VLAGFGMVAGNLISGRLSDKYMPGRVAAIAQGMICVALLLVFFLAQISWLNVLLMCLCTA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFAVSSPQQVLLIRYSKGGEMLGAASVQVAFNLGNAIGAYCGGLPLEVGLGYKYPALIG
HHHCCCCCCEEEEEEECCCCCEEEHHHEEEEEECCHHHHHHHCCCCEEECCCCCCHHHHH
SGFAFIGFLLLTFFYRKYERTT
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSLIALAFGTLGLGIAEFVMMGILPDIAKDLHISIATAGHLISAYALGVCVGAPMLII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHH
ARRYPLKHILLVLVGIMMIGNLCAALASNYWVLMIARFISGLPHGAYFGVGSIVAEKLAD
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KGRGSEAVSIMIAGMTIANLFGVPLGTALSTMLSWRLTFLLVGCWGIAILYYIWRWVPMV
CCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLPDTGFKGQFRFLKTQAPWLILGATMLGNGGVFCWYSYISPLLTQVSGFSAESLTVLM
HCCCCCCCCCCEEEEECCCCEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHH
VLAGFGMVAGNLISGRLSDKYMPGRVAAIAQGMICVALLLVFFLAQISWLNVLLMCLCTA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFAVSSPQQVLLIRYSKGGEMLGAASVQVAFNLGNAIGAYCGGLPLEVGLGYKYPALIG
HHHCCCCCCEEEEEEECCCCCEEEHHHEEEEEECCHHHHHHHCCCCEEECCCCCCHHHHH
SGFAFIGFLLLTFFYRKYERTT
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744033; 9278503 [H]