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The map label for this gene is xerC [C]

Identifier: 150009561

GI number: 150009561

Start: 3560735

End: 3561898

Strand: Direct

Name: xerC [C]

Synonym: BDI_2974

Alternate gene names: 150009561

Gene position: 3560735-3561898 (Clockwise)

Preceding gene: 150009560

Following gene: 150009574

Centisome position: 74.01

GC content: 34.28

Gene sequence:

>1164_bases
ATGAGCAAGAAGAAAACTGAACTTTCCACAAAAGAAAAACAGCCAGTTAAAATCAGATACAAGAAACTAGCGAATGGCAA
TCTTTCTATCTATTTGGATATCTACCAGAACGGAAAACGAAACTATAAGTTTCTTAAACTATATCTAGTCCCAGAAACAA
ATGAGAAGGCTAAAGCTATTAACAGAAAGAATATGGACTTAGCAGAAGCGATTAAGGCTCAAATGATCATTCAACTAAAC
ACAACCATTCACGGGCTAAGCAATCAAAAAGAAAGCTCCAAAATATTACTACGTGACTATATCCGAAGCTTTGCAGAAAC
CAAAGGAAAATCCACCCAACAGAATCTCAACTCCCTTGTATATCATCTAGAGCGAAGTAAAGGAACTGATATACAAATAG
GAAAAGTAGATAAATATTACATCATGGACTTTATTGAGTATTTAGAAGATGCTCAAATAGAACACACCCAAAGAAACAAA
GGAAGAAAGCTAAGCAAGAATAGTCAAGCCATGTACTTTAAATGTCTCAAAATGGTTTTGGATGAGGCTGTAAGTGATGA
CATAATACCATTGAACCCTATTTTATCTATAAAAAAGAAATACCGTCCATCGGCAGAAAAAGCCCCAAAACGGGAATTTC
TCACAGAAGATGAATTAAGGAGATTCGCAGGAACTGACCATCCAAATGAATTATTAAAACGAGCTTTCATGATCGGCTGT
CTAACAGGCTTAAGGCATTGTGACATTAAACAAATGAAATGGAGTAATATAGGAGTTGTTAAAAATGGCATAGAATGCAT
TTCTTTAGTCCAAGAAAAGACAAATGATCCAGTAGATATACCTCTTAACGAAAATATTAGGAAATGGCTACCAGAGCAAG
GAAATGCCTCAATGGAAGATCTAGTATTTTCTGGATTAATAACTTTAGGTAGAAGTAATGAGATATTGCCTAAATGGGCT
GAAAAAGCTGGAATAAACAAACATCTTACATTCCATTGTTCACGCCATACATTTGCCGTTCTTGCTATTGCAAAGAAAGT
AGATATTTATACTGTATCTAAACTACTAGGACACCAAAGTATAACAGTTACAGAAATTTACACAGAAGTTCTTGATAATT
CAAAAAAAGAAGCAATGGAAGCAATAGGTAAAATCAATGTATAA

Upstream 100 bases:

>100_bases
ACTCTTCCTTATCGTTATTTATGTTATTTTTAGCCTTAATTTGTTACTCATTTGTTACCTGTTCTGTATTTTTGTAGCGG
GTAACAAAAGACTGATAACA

Downstream 100 bases:

>100_bases
TTTACATCTATAAATCTTATAATATCCAAACACCATAAACAAGGGGAAAAGGACTCTCGCCGCCGTCCACAGGCACAGGG
CCTCCCCCGACAATTGACCC

Product: site-specific recombinase

Products: NA

Alternate protein names: Tyrosine Type Site-Specific Recombinase; Integrase Family Protein; Transposase; Site-Specific Recombinase; Phage Integrase Family Protein; Bacteriophage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Mobilizable Transposon Int Protein; Mobilizable Transposon Protein Int Protein; Mobilizable Transposon; Integrase/Transposase

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSKKKTELSTKEKQPVKIRYKKLANGNLSIYLDIYQNGKRNYKFLKLYLVPETNEKAKAINRKNMDLAEAIKAQMIIQLN
TTIHGLSNQKESSKILLRDYIRSFAETKGKSTQQNLNSLVYHLERSKGTDIQIGKVDKYYIMDFIEYLEDAQIEHTQRNK
GRKLSKNSQAMYFKCLKMVLDEAVSDDIIPLNPILSIKKKYRPSAEKAPKREFLTEDELRRFAGTDHPNELLKRAFMIGC
LTGLRHCDIKQMKWSNIGVVKNGIECISLVQEKTNDPVDIPLNENIRKWLPEQGNASMEDLVFSGLITLGRSNEILPKWA
EKAGINKHLTFHCSRHTFAVLAIAKKVDIYTVSKLLGHQSITVTEIYTEVLDNSKKEAMEAIGKINV

Sequences:

>Translated_387_residues
MSKKKTELSTKEKQPVKIRYKKLANGNLSIYLDIYQNGKRNYKFLKLYLVPETNEKAKAINRKNMDLAEAIKAQMIIQLN
TTIHGLSNQKESSKILLRDYIRSFAETKGKSTQQNLNSLVYHLERSKGTDIQIGKVDKYYIMDFIEYLEDAQIEHTQRNK
GRKLSKNSQAMYFKCLKMVLDEAVSDDIIPLNPILSIKKKYRPSAEKAPKREFLTEDELRRFAGTDHPNELLKRAFMIGC
LTGLRHCDIKQMKWSNIGVVKNGIECISLVQEKTNDPVDIPLNENIRKWLPEQGNASMEDLVFSGLITLGRSNEILPKWA
EKAGINKHLTFHCSRHTFAVLAIAKKVDIYTVSKLLGHQSITVTEIYTEVLDNSKKEAMEAIGKINV
>Mature_386_residues
SKKKTELSTKEKQPVKIRYKKLANGNLSIYLDIYQNGKRNYKFLKLYLVPETNEKAKAINRKNMDLAEAIKAQMIIQLNT
TIHGLSNQKESSKILLRDYIRSFAETKGKSTQQNLNSLVYHLERSKGTDIQIGKVDKYYIMDFIEYLEDAQIEHTQRNKG
RKLSKNSQAMYFKCLKMVLDEAVSDDIIPLNPILSIKKKYRPSAEKAPKREFLTEDELRRFAGTDHPNELLKRAFMIGCL
TGLRHCDIKQMKWSNIGVVKNGIECISLVQEKTNDPVDIPLNENIRKWLPEQGNASMEDLVFSGLITLGRSNEILPKWAE
KAGINKHLTFHCSRHTFAVLAIAKKVDIYTVSKLLGHQSITVTEIYTEVLDNSKKEAMEAIGKINV

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44366; Mature: 44235

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKTELSTKEKQPVKIRYKKLANGNLSIYLDIYQNGKRNYKFLKLYLVPETNEKAKAI
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHH
NRKNMDLAEAIKAQMIIQLNTTIHGLSNQKESSKILLRDYIRSFAETKGKSTQQNLNSLV
CCCCCCHHHHHHHHEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YHLERSKGTDIQIGKVDKYYIMDFIEYLEDAQIEHTQRNKGRKLSKNSQAMYFKCLKMVL
HHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
DEAVSDDIIPLNPILSIKKKYRPSAEKAPKREFLTEDELRRFAGTDHPNELLKRAFMIGC
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LTGLRHCDIKQMKWSNIGVVKNGIECISLVQEKTNDPVDIPLNENIRKWLPEQGNASMED
HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCCCHHH
LVFSGLITLGRSNEILPKWAEKAGINKHLTFHCSRHTFAVLAIAKKVDIYTVSKLLGHQS
HHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCHHEEHHHHHHHHHHHHHHHHHCCCC
ITVTEIYTEVLDNSKKEAMEAIGKINV
CHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SKKKTELSTKEKQPVKIRYKKLANGNLSIYLDIYQNGKRNYKFLKLYLVPETNEKAKAI
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHH
NRKNMDLAEAIKAQMIIQLNTTIHGLSNQKESSKILLRDYIRSFAETKGKSTQQNLNSLV
CCCCCCHHHHHHHHEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YHLERSKGTDIQIGKVDKYYIMDFIEYLEDAQIEHTQRNKGRKLSKNSQAMYFKCLKMVL
HHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
DEAVSDDIIPLNPILSIKKKYRPSAEKAPKREFLTEDELRRFAGTDHPNELLKRAFMIGC
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LTGLRHCDIKQMKWSNIGVVKNGIECISLVQEKTNDPVDIPLNENIRKWLPEQGNASMED
HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCCCHHH
LVFSGLITLGRSNEILPKWAEKAGINKHLTFHCSRHTFAVLAIAKKVDIYTVSKLLGHQS
HHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCHHEEHHHHHHHHHHHHHHHHHCCCC
ITVTEIYTEVLDNSKKEAMEAIGKINV
CHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA