| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mnmG
Identifier: 150009552
GI number: 150009552
Start: 3547782
End: 3549659
Strand: Direct
Name: mnmG
Synonym: BDI_2965
Alternate gene names: 150009552
Gene position: 3547782-3549659 (Clockwise)
Preceding gene: 150009549
Following gene: 150009553
Centisome position: 73.74
GC content: 50.85
Gene sequence:
>1878_bases ATGACTTTCAATTACGACGTAATAGTAGTAGGCGCAGGACATGCCGGCTGTGAAGCCGCCGCCGCCGCGGCGAATCTAGG ATCAAAGACGCTTTTGATCACGATGGACATGAACAAGATCGCCCAGATGAGTTGTAACCCGGCAGTCGGGGGAATCGCCA AAGGACAGATCGTACGAGAGATCGATGCGCTAGGCGGATATATGGGAATCGTGACCGACCAGACCGCTATCCAATTCCGT ATGTTAAACCGTAGCAAAGGACCGGCCATGTGGAGCCCGCGTGCCCAAAGCGACCGTGCCCGTTTTATCGATTGCTGGCG GGGCATACTGGAGAATATGCCGAATCTATCCATCTGGCAGGATATGGTTCAAGAACTGATTATCGAGCATGGACAAGTCT GCGGCGTCCGTACGGGAATGAATGTCGTATTCCGTGCCGGAGCGGTGGTGCTTACGAACGGGACCTTCCTAAACGGCCTG CTTCATATCGGAAGAACCCAGATACGGGGCGGACGTATCGCCGAGCCTGCGGCGACCGGACTTACCGAGCAACTTATCTC TTTAGGTATCCAAACAGATCGCATGAAAACCGGAACACCGGTCCGTATCGATGGCCGGAGCGTTCACTTCGATGAAATGG AGGAACAACCGGGGGAAAACGATTTCCATAAGTTCTCTTACATGGATACCAGTCATCGTAAATTAAAACAATTGAGTTGC TGGACTACCTTTACGAACGAGGCTTGCCACGATATATTACGGGAAGGTCTCCCCGACTCTCCTCTTTATAATGGACAGAT CAAAAGTATCGGTCCCCGTTATTGTCCTAGTATCGAAACGAAAATCGTGACGTTCGCCGACAAGACGCAGCATCAACTAT TCCTAGAGCCGGAAGGCGAGGCCACGCAAGAATATTACCTAAATGGCTTCTCCTCTTCCCTACCCTTGGATATCCAGCTT CGTGCGCTCCAAGCGATCCCCGCTTTCCGTGACGTGCAAATCTATCGTCCCGGATATGCGATTGAATACGATTTCTTCGA CCCGACTCAGCTAAGACATAATTTGGAGACCAAACAAATCCGTAATCTTTTCTTTGCCGGACAGATCAACGGAACTACCG GATACGAGGAAGCCGGCGGACAAGGTTTGGTAGCGGGTATCAACGCCCACATCAATTGCCACGGCGGACAACCTTTTATC CTCGGAAGAGACGAGGCTTATATCGGTGTCCTTATCGACGATTTGGTAACAAAAGGCGTGGACGAGCCTTACCGTATGTT TACCTCTCGTGCGGAGTACCGCATCTTACTGCGCCAAGACGACGCAGATATGCGACTCACCGAGAAATCCTACCAAATGG GATTGGCCAAACAAGACCGCTACGATTTACTGCGAGAGAAAAAAGAGAGCCGTGACGCTATCATTCGTTTTGCGGAGACC TACTCCGTAAAGCCTCAATATATAAACAGCGGTTTGGAGAAACTGGGTACAGCCCCCCTATCCCATGGTTGCAAATTATT CGATGTCGTACTCCGTCCGCAGACTACATTGGAAAACCTCGCGGATCTAGTTCCGGCCCTTCGTGCGGAGCTGGACAAAG TCCCGGCCTCTCGTAAGGAAGAGATCATCGAGGCCGCCGAGATATTGATTAAGTATAGCGGCTACATCAAGCGAGAGCAA ATCATAGCGGACAAGATAAACCGCTTAGAGAATATCCGGATCAAGGGTAAATTCGATTACAATTCTATCCAGTCTTTATC TACGGAAGCCCGCCAGAAATTGACCCGGATAGACCCCGACACGATCGCTCAAGCGAGCCGCATCCCGGGTATTTCCCCTA GCGACATCAACATCCTTTTGGTACTGCTCGGAAGATAA
Upstream 100 bases:
>100_bases TTCGTTAAACCTGAAAACAATGTATGTATTTATTATACAAATATAAACGAATTCTTTCACGAACACTCACTATCTTCGCG TAAAATAAAAGGGAATAAAA
Downstream 100 bases:
>100_bases AACACGAAATGTTCCACGTGAAACATATTAAAGAAGATATTCAAATGAATGAAGCTAAAACACTGGTTATACGAGGAAAT CTGGTAGATATAATCAACAG
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MTFNYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDALGGYMGIVTDQTAIQFR MLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMVQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGL LHIGRTQIRGGRIAEPAATGLTEQLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSC WTTFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEATQEYYLNGFSSSLPLDIQL RALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNLFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFI LGRDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAET YSVKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRKEEIIEAAEILIKYSGYIKREQ IIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDTIAQASRIPGISPSDINILLVLLGR
Sequences:
>Translated_625_residues MTFNYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDALGGYMGIVTDQTAIQFR MLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMVQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGL LHIGRTQIRGGRIAEPAATGLTEQLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSC WTTFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEATQEYYLNGFSSSLPLDIQL RALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNLFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFI LGRDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAET YSVKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRKEEIIEAAEILIKYSGYIKREQ IIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDTIAQASRIPGISPSDINILLVLLGR >Mature_624_residues TFNYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVREIDALGGYMGIVTDQTAIQFRM LNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQDMVQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLL HIGRTQIRGGRIAEPAATGLTEQLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSCW TTFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGEATQEYYLNGFSSSLPLDIQLR ALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQIRNLFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFIL GRDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAETY SVKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRKEEIIEAAEILIKYSGYIKREQI IADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPDTIAQASRIPGISPSDINILLVLLGR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=640, Percent_Identity=39.0625, Blast_Score=402, Evalue=1e-112, Organism=Homo sapiens, GI19882217, Length=665, Percent_Identity=37.593984962406, Blast_Score=388, Evalue=1e-107, Organism=Homo sapiens, GI183227703, Length=680, Percent_Identity=36.7647058823529, Blast_Score=382, Evalue=1e-106, Organism=Escherichia coli, GI2367273, Length=626, Percent_Identity=47.6038338658147, Blast_Score=573, Evalue=1e-165, Organism=Caenorhabditis elegans, GI17534255, Length=621, Percent_Identity=37.1980676328502, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6321202, Length=625, Percent_Identity=41.92, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24658174, Length=629, Percent_Identity=42.2893481717011, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_PARD8 (A6LG59)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001304295.1 - ProteinModelPortal: A6LG59 - SMR: A6LG59 - STRING: A6LG59 - GeneID: 5308114 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2965 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - BioCyc: PDIS435591:BDI_2965-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 69800; Mature: 69669
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVRE CCEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHH IDALGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQ HHHCCCEEEEEECCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DMVQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATG HHHHHHHHHCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHCCHHCCCCCCCCHHHHH LTEQLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSC HHHHHHHCCCCCCCCCCCCCEEECCCEECHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH WTTFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCC ATQEYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQI CCHHHHHCCCCCCCCEEEEEHHHHHCCCCCCEEEECCCEEEEECCCCHHHHHHCCCHHHH RNLFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGV HHEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEHHHHHHHHHCCC DEPYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAET CHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEHHH YSVKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRKE CCCCHHHHHHHHHHHCCCCHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHH EIIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHCCCHH TIAQASRIPGISPSDINILLVLLGR HHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure TFNYDVIVVGAGHAGCEAAAAAANLGSKTLLITMDMNKIAQMSCNPAVGGIAKGQIVRE CEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHH IDALGGYMGIVTDQTAIQFRMLNRSKGPAMWSPRAQSDRARFIDCWRGILENMPNLSIWQ HHHCCCEEEEEECCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DMVQELIIEHGQVCGVRTGMNVVFRAGAVVLTNGTFLNGLLHIGRTQIRGGRIAEPAATG HHHHHHHHHCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHCCHHCCCCCCCCHHHHH LTEQLISLGIQTDRMKTGTPVRIDGRSVHFDEMEEQPGENDFHKFSYMDTSHRKLKQLSC HHHHHHHCCCCCCCCCCCCCEEECCCEECHHHHHCCCCCCCCCEEECCCCHHHHHHHHHH WTTFTNEACHDILREGLPDSPLYNGQIKSIGPRYCPSIETKIVTFADKTQHQLFLEPEGE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCC ATQEYYLNGFSSSLPLDIQLRALQAIPAFRDVQIYRPGYAIEYDFFDPTQLRHNLETKQI CCHHHHHCCCCCCCCEEEEEHHHHHCCCCCCEEEECCCEEEEECCCCHHHHHHCCCHHHH RNLFFAGQINGTTGYEEAGGQGLVAGINAHINCHGGQPFILGRDEAYIGVLIDDLVTKGV HHEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEHHHHHHHHHCCC DEPYRMFTSRAEYRILLRQDDADMRLTEKSYQMGLAKQDRYDLLREKKESRDAIIRFAET CHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEHHH YSVKPQYINSGLEKLGTAPLSHGCKLFDVVLRPQTTLENLADLVPALRAELDKVPASRKE CCCCHHHHHHHHHHHCCCCHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHH EIIEAAEILIKYSGYIKREQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRIDPD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHCCCHH TIAQASRIPGISPSDINILLVLLGR HHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA