| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009526
Identifier: 150009526
GI number: 150009526
Start: 3514304
End: 3515596
Strand: Direct
Name: 150009526
Synonym: BDI_2939
Alternate gene names: NA
Gene position: 3514304-3515596 (Clockwise)
Preceding gene: 150009525
Following gene: 150009527
Centisome position: 73.04
GC content: 54.76
Gene sequence:
>1293_bases ATGAAAAATAATAAAGATATAGAGTTACGTAGCGAGGAGGTACAGGAGGTGATGGGGCAAGTGCCGGCCTGGATCGTACG GTGGGGGATAACGCTGTTATTCCTCGTGGTCGTAGCGTTGCTGGTGGGGAGCTGTTTCTTCAAGTATCCTGACGTGATCA CGGCTGACATGACATTGACGGGGCAACATCCCGCAACGGCGGTGGTGACACGGGCGGCGGGGAAGATACAGGAGCTGCTC GTCAGGGATAATCGTCCGGTAAGGCAGGGGGATTGGCTGGCGGTCATAGAGAATCACGCCGACACGGACGATGCCATCTA TCTGGATAAGGCGTTGGAACGATCCGGAAGCGACGTGGATAGCCTGGACAAGGCATTATCAAAGTACAAGGAGCTATCGC TGGGTGATATGCAAGCGGCTTACTCGGGACTACTGTCGGCGCTCCATGCCTGCGTCAATTACAGGGAGATCGATTATTAT CCGCAAAAAATGGCCTCCATCCGCAAACAGATAGCGTTGTATAAGGCTTACTATAACGAGACCGAACGGCAGCGGAAGAC CCTCTCGGAGCAATTCGCCTTGACAAGGCGGCAATACGCCCGGGATTCATTATTGTATAGCCGGTCCGTGATTTCTTCCT ACGAGCATGAGACCGCACGGGCTTCCCTGCTGCAAAGCCGTTATTCGCTGGAAGGGGCGTCAGCCTCGGCCGAGAATCTC CGGATACAGATCGGGGAGCAAGAGCAATCCTTGCTGGATCTGACGCTGGAGCGGAGCGAGAAAGAATTTACGCTACGGCA GGAATTACAGACCGCCCGGGAACAATTGCTGAACAGCATGAACGAGTGGAGGTTGCGTTATTGCCTCATCGCCCCGGTAG GGGGTGTCGTGACTTTCACCAAGTACTGGAATGAGAACCAATATATCCCATCCGGAGAGGTGGCTTTCACCGTCGTGCCG CAAGGCGAGGGCCGGCTGGTGGGGAAGGTGCGCATACCGATAGCACGCTCGGGAAAAGTCCAGAGAGGCCAGCGGGCGAT CGTCCGTTTCTCCAATTTCCCGGATCAGGAGTTTGGAGTGGTAAACGGCGTGGTATCGAATATCTCATTGGTCCCCACCG ACGAGTACTATACGGCGGATATCGATTTTCCAGAGGGGCTGAGAACCAATTACGGTATCGACCTGCCCGTCTCGCCCGAG ACGCAAGCCTCCGCGGAGATCGTAACGGAAGAATTACGCCTGATCGAACGATTCTTCCTCCCGATCAAACGGATCGTGAA AGAAGGATTTTAG
Upstream 100 bases:
>100_bases GAAGAAATTTTTATCCTAAAAGGTGTTGATGCTGCTATATACGGTCCAAAAGGGAAAAGAGGGATTATCGTAGTTACCAC CAAACGAAATAAACCACCTT
Downstream 100 bases:
>100_bases TGTAATATTATCCTTTCTTTCCTATGCGTTTATCACAGATGTCACGAGTGACAGAGTCCGCCGCAGACTATGGTATTCAA CTTCTATTACAAATTCTTAC
Product: putative hemolysin secretion transport system membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKNNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQELL VRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYY PQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAENL RIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVVP QGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPE TQASAEIVTEELRLIERFFLPIKRIVKEGF
Sequences:
>Translated_430_residues MKNNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQELL VRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYY PQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAENL RIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVVP QGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPE TQASAEIVTEELRLIERFFLPIKRIVKEGF >Mature_430_residues MKNNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQELL VRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYY PQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAENL RIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVVP QGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPE TQASAEIVTEELRLIERFFLPIKRIVKEGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48789; Mature: 48789
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLT CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEE GQHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHH SLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYKAYYNE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH TERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFT EEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEH KYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGV EECCCCCCCCCCCEEEEEEECCCCEEEEEEEECEECCCCCCCCHHHHHEECCCCCHHHHH VNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPETQASAEIVTEELRLIERFFL HHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PIKRIVKEGF HHHHHHHCCC >Mature Secondary Structure MKNNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLT CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEE GQHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHH SLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYKAYYNE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH TERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFT EEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEH KYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGV EECCCCCCCCCCCEEEEEEECCCCEEEEEEEECEECCCCCCCCHHHHHEECCCCCHHHHH VNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPETQASAEIVTEELRLIERFFL HHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PIKRIVKEGF HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA