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The map label for this gene is ntrY [H]

Identifier: 150009426

GI number: 150009426

Start: 3381058

End: 3382326

Strand: Reverse

Name: ntrY [H]

Synonym: BDI_2834

Alternate gene names: 150009426

Gene position: 3382326-3381058 (Counterclockwise)

Preceding gene: 150009427

Following gene: 150009425

Centisome position: 70.3

GC content: 50.59

Gene sequence:

>1269_bases
ATGAGATCGTATGCGTTCACGGTCATCTCGCACATCCTAGGCATCGTCTTGTCTACGGGACTCCTGTTCTATTGCGTGCA
TGAGGAGATTATCTTTTGTCCTACTTTTTGCGGGATCGCGATCTTGTATTTCTCGATTCATCTTTATTTCATACAGATGC
GGCAGGTGAAGTATTGGCGTTATGTGGTGGATTGCTTGCGGCAGCAAGACTTGATCCAGATCGTTCGTTCACCTTACGAG
GATAAGGTGATGCGGGAGTTGGCGGACGATTTGTCCGCAGCCCTGCGATCCTTGCGTGGCCGATTGATGGACGAGGAGGT
GAGGCGGCAGTATTTTGAGAGCCTGTTGAATAAGGTGGATACAGCCGTACTTGTTACCGACAAGGAAGGGGCTATTGAAT
GGAAGAACCGGACCGCCGACGCGTTGCTGGATACGAGGTGTCGGTTACCCAATGAGTTTTTGGAGGCTATCAAGGCGGGG
AAGACGGTGGTGCGTTACGGAAAACCATCCGTTCCGCAAGATTGGGCGATCGATGCCACTCGTATCGACTTGCGAGGTTG
CGAGCGTTGGATCGTCAGCTTGAAGAACATCCATTCTACCTTGGAGCGGAATGAGATGGAGGCTTGGCAGAAATTGATCC
GTGTCTTGACGCACGAGATCATGAACTCCATCACACCCGTTATCTCGTTGTCCGAGACCTTGAGCAAACGTTGCAAAGCA
GATCCGGATGATGTCCGGAATCGTTCGTATATCCAGCATGGGGTAAATGTCATCCATCGCCGGAGTAAAGGGTTGCTGGA
TTTCGTTGAGAATTACCGGAGATTGACCCGGATCGCCTCTCCGGTAAAGACCCGTATCTTAGTGAAAGATTTCTTTTCGG
ATTTAAGGCGTTTGTGCCCTGAGCCTTCTATCCGTTTCCGCTTGCCGGACGAGCCTCTGGAATGGTTCGCGGATCGGGCG
CAGATGGAGCAGGTCTTCTTGAACTTAGTGAAGAATGCTTGTGAGGCTTGTGCGGAAAAGTCAAACCCTGAGATTATCGT
GGCGGCTCAGCGGGAGGGAAACGAACTTGTCTTTACCGTGCGAGACAACGGTATCGGTGTCTTACCCGAGGTTATCGACC
GGGTTTTTGTACCTTTCTTTACCACCAAGCCCTCCGGCTCGGGTATCGGTTTAAGCATCTGTAAGCAAATAATCACCTTG
CATGGCGGCCATATCTCGGTAGAATCCGAGAATGGAAAGGGTAGCTGTTTCTTTTTGTACTTTAATTGA

Upstream 100 bases:

>100_bases
AGCGAGCCTTGCGGCAAAGCAATGGTAATATGAGCTATGCCGCCGAGCTATTGGGTATCACCCGTTTTTCCTTGTATCGT
AAAATAGAGAAGTTCGGCTT

Downstream 100 bases:

>100_bases
TTATCAGCCTATTGCAGTTTTTCTAAATTTCTTATACGGAAAACTTTAGTTTCTTCAAGGAAAAACTTTCGTTTCTATAT
AGGGAAACAAAAGTTTCTTA

Product: two-component system sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MRSYAFTVISHILGIVLSTGLLFYCVHEEIIFCPTFCGIAILYFSIHLYFIQMRQVKYWRYVVDCLRQQDLIQIVRSPYE
DKVMRELADDLSAALRSLRGRLMDEEVRRQYFESLLNKVDTAVLVTDKEGAIEWKNRTADALLDTRCRLPNEFLEAIKAG
KTVVRYGKPSVPQDWAIDATRIDLRGCERWIVSLKNIHSTLERNEMEAWQKLIRVLTHEIMNSITPVISLSETLSKRCKA
DPDDVRNRSYIQHGVNVIHRRSKGLLDFVENYRRLTRIASPVKTRILVKDFFSDLRRLCPEPSIRFRLPDEPLEWFADRA
QMEQVFLNLVKNACEACAEKSNPEIIVAAQREGNELVFTVRDNGIGVLPEVIDRVFVPFFTTKPSGSGIGLSICKQIITL
HGGHISVESENGKGSCFFLYFN

Sequences:

>Translated_422_residues
MRSYAFTVISHILGIVLSTGLLFYCVHEEIIFCPTFCGIAILYFSIHLYFIQMRQVKYWRYVVDCLRQQDLIQIVRSPYE
DKVMRELADDLSAALRSLRGRLMDEEVRRQYFESLLNKVDTAVLVTDKEGAIEWKNRTADALLDTRCRLPNEFLEAIKAG
KTVVRYGKPSVPQDWAIDATRIDLRGCERWIVSLKNIHSTLERNEMEAWQKLIRVLTHEIMNSITPVISLSETLSKRCKA
DPDDVRNRSYIQHGVNVIHRRSKGLLDFVENYRRLTRIASPVKTRILVKDFFSDLRRLCPEPSIRFRLPDEPLEWFADRA
QMEQVFLNLVKNACEACAEKSNPEIIVAAQREGNELVFTVRDNGIGVLPEVIDRVFVPFFTTKPSGSGIGLSICKQIITL
HGGHISVESENGKGSCFFLYFN
>Mature_422_residues
MRSYAFTVISHILGIVLSTGLLFYCVHEEIIFCPTFCGIAILYFSIHLYFIQMRQVKYWRYVVDCLRQQDLIQIVRSPYE
DKVMRELADDLSAALRSLRGRLMDEEVRRQYFESLLNKVDTAVLVTDKEGAIEWKNRTADALLDTRCRLPNEFLEAIKAG
KTVVRYGKPSVPQDWAIDATRIDLRGCERWIVSLKNIHSTLERNEMEAWQKLIRVLTHEIMNSITPVISLSETLSKRCKA
DPDDVRNRSYIQHGVNVIHRRSKGLLDFVENYRRLTRIASPVKTRILVKDFFSDLRRLCPEPSIRFRLPDEPLEWFADRA
QMEQVFLNLVKNACEACAEKSNPEIIVAAQREGNELVFTVRDNGIGVLPEVIDRVFVPFFTTKPSGSGIGLSICKQIITL
HGGHISVESENGKGSCFFLYFN

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=28.6919831223629, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=27.9279279279279, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI48994928, Length=264, Percent_Identity=26.5151515151515, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI145693157, Length=115, Percent_Identity=34.7826086956522, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790300, Length=348, Percent_Identity=27.0114942528736, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790567, Length=328, Percent_Identity=25.609756097561, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48615; Mature: 48615

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYAFTVISHILGIVLSTGLLFYCVHEEIIFCPTFCGIAILYFSIHLYFIQMRQVKYWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVDCLRQQDLIQIVRSPYEDKVMRELADDLSAALRSLRGRLMDEEVRRQYFESLLNKVD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
TAVLVTDKEGAIEWKNRTADALLDTRCRLPNEFLEAIKAGKTVVRYGKPSVPQDWAIDAT
CEEEEECCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHH
RIDLRGCERWIVSLKNIHSTLERNEMEAWQKLIRVLTHEIMNSITPVISLSETLSKRCKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPDDVRNRSYIQHGVNVIHRRSKGLLDFVENYRRLTRIASPVKTRILVKDFFSDLRRLCP
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPSIRFRLPDEPLEWFADRAQMEQVFLNLVKNACEACAEKSNPEIIVAAQREGNELVFTV
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
RDNGIGVLPEVIDRVFVPFFTTKPSGSGIGLSICKQIITLHGGHISVESENGKGSCFFLY
ECCCCCCHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEE
FN
EC
>Mature Secondary Structure
MRSYAFTVISHILGIVLSTGLLFYCVHEEIIFCPTFCGIAILYFSIHLYFIQMRQVKYWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVDCLRQQDLIQIVRSPYEDKVMRELADDLSAALRSLRGRLMDEEVRRQYFESLLNKVD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
TAVLVTDKEGAIEWKNRTADALLDTRCRLPNEFLEAIKAGKTVVRYGKPSVPQDWAIDAT
CEEEEECCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHH
RIDLRGCERWIVSLKNIHSTLERNEMEAWQKLIRVLTHEIMNSITPVISLSETLSKRCKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPDDVRNRSYIQHGVNVIHRRSKGLLDFVENYRRLTRIASPVKTRILVKDFFSDLRRLCP
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPSIRFRLPDEPLEWFADRAQMEQVFLNLVKNACEACAEKSNPEIIVAAQREGNELVFTV
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
RDNGIGVLPEVIDRVFVPFFTTKPSGSGIGLSICKQIITLHGGHISVESENGKGSCFFLY
ECCCCCCHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEE
FN
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]