| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009405
Identifier: 150009405
GI number: 150009405
Start: 3356535
End: 3357332
Strand: Direct
Name: 150009405
Synonym: BDI_2813
Alternate gene names: NA
Gene position: 3356535-3357332 (Clockwise)
Preceding gene: 150009404
Following gene: 150009406
Centisome position: 69.76
GC content: 50.25
Gene sequence:
>798_bases ATGATATTACTTAGTTTTGATATCGAGGAGTTTGACGCTCCATTGGAACACGGCGTGGAATTGCCGTTCGAGGAACAAAT GCGTACTTCCGTGGAAGGAACCCGGAAGATATTGGCATGTCTGGCCCGTCACCGGGTAAAAGCGACTTTCTTTTGCACGG CGAACTTCGCCCTTCATGCGAAGGATTTGATCTTGGACATCCAAAAGGGTGGACATGAGATCGCTTCGCATGGTTTTTAT CACTCGTCGTTCGAGACCGCCGATCTACGCAAGTCCAAAGAGGCATTGGAGGAACTGACCGGACAACCGGTGAACGGTTT CCGTATGGCCCGCATGATGCCCGTCGAAGAAGAAGAGATCCATAAGGCCGGTTACTTATACAACTCGTCCTTGAACCCGA CTTGTATTCCCGGCCGTTATAACCATCTGGGGCAACCCCGCACCTATTTCATGAAAGATGGCGTATTGCAACTGCCCGCC TCGGTGACCCCGATCGTCCGTTTCCCCTTGTTTTGGCTGGCTTACCATAACCTTCCGGCCACCTTGTACCGTAAGTTAGC GCTTTGGACTTGGAAAGAGGACGGTTATTTCCTGACCTATTTCCATCCGTGGGAGTTTACCTCCTTGAGCGACCGGAAAG AGCTAAAGTTGCCGTTTATCATGACCAACCATTCCGGTTGCGGCATGGAAAGAAGGCTGGACGCCTTGATCCGTTTCTTC AAGGATAAAAGAGCGCCGTTCGGTACCTATACGCAATTCTCACAAGAAATCTTGAGTAAGAGTCATGGCCAAGAATAA
Upstream 100 bases:
>100_bases CAAAGAAGGACTAGCGGTATCCGATATGGGATTCAAGGTCCTGCGGCGGGAAGCGTTGAACTTCTTATCCATCTTATTTC ATAGAGATTAATTAACATTC
Downstream 100 bases:
>100_bases GTTTTATGTCGTATGGAAAGGGTTGAACCCGGGAATCTATGATAACTGGGCGGAATGCAAGGCACAGGTAGACGGACAAG AGGGAGCCAAATATAAATCC
Product: putative polysaccharide deacetylase
Products: NA
Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Family Protein; PEP-CTERM Locus Polysaccharide Deactylase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MILLSFDIEEFDAPLEHGVELPFEEQMRTSVEGTRKILACLARHRVKATFFCTANFALHAKDLILDIQKGGHEIASHGFY HSSFETADLRKSKEALEELTGQPVNGFRMARMMPVEEEEIHKAGYLYNSSLNPTCIPGRYNHLGQPRTYFMKDGVLQLPA SVTPIVRFPLFWLAYHNLPATLYRKLALWTWKEDGYFLTYFHPWEFTSLSDRKELKLPFIMTNHSGCGMERRLDALIRFF KDKRAPFGTYTQFSQEILSKSHGQE
Sequences:
>Translated_265_residues MILLSFDIEEFDAPLEHGVELPFEEQMRTSVEGTRKILACLARHRVKATFFCTANFALHAKDLILDIQKGGHEIASHGFY HSSFETADLRKSKEALEELTGQPVNGFRMARMMPVEEEEIHKAGYLYNSSLNPTCIPGRYNHLGQPRTYFMKDGVLQLPA SVTPIVRFPLFWLAYHNLPATLYRKLALWTWKEDGYFLTYFHPWEFTSLSDRKELKLPFIMTNHSGCGMERRLDALIRFF KDKRAPFGTYTQFSQEILSKSHGQE >Mature_265_residues MILLSFDIEEFDAPLEHGVELPFEEQMRTSVEGTRKILACLARHRVKATFFCTANFALHAKDLILDIQKGGHEIASHGFY HSSFETADLRKSKEALEELTGQPVNGFRMARMMPVEEEEIHKAGYLYNSSLNPTCIPGRYNHLGQPRTYFMKDGVLQLPA SVTPIVRFPLFWLAYHNLPATLYRKLALWTWKEDGYFLTYFHPWEFTSLSDRKELKLPFIMTNHSGCGMERRLDALIRFF KDKRAPFGTYTQFSQEILSKSHGQE
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30705; Mature: 30705
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLSFDIEEFDAPLEHGVELPFEEQMRTSVEGTRKILACLARHRVKATFFCTANFALHA CEEEEECHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEH KDLILDIQKGGHEIASHGFYHSSFETADLRKSKEALEELTGQPVNGFRMARMMPVEEEEI HHHEEEHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCHHHH HKAGYLYNSSLNPTCIPGRYNHLGQPRTYFMKDGVLQLPASVTPIVRFPLFWLAYHNLPA HHHCCEECCCCCCEECCCCCCCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCHH TLYRKLALWTWKEDGYFLTYFHPWEFTSLSDRKELKLPFIMTNHSGCGMERRLDALIRFF HHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCEECCEEEECCCCCCHHHHHHHHHHHH KDKRAPFGTYTQFSQEILSKSHGQE HHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILLSFDIEEFDAPLEHGVELPFEEQMRTSVEGTRKILACLARHRVKATFFCTANFALHA CEEEEECHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEH KDLILDIQKGGHEIASHGFYHSSFETADLRKSKEALEELTGQPVNGFRMARMMPVEEEEI HHHEEEHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCHHHH HKAGYLYNSSLNPTCIPGRYNHLGQPRTYFMKDGVLQLPASVTPIVRFPLFWLAYHNLPA HHHCCEECCCCCCEECCCCCCCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCHH TLYRKLALWTWKEDGYFLTYFHPWEFTSLSDRKELKLPFIMTNHSGCGMERRLDALIRFF HHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCEECCEEEECCCCCCHHHHHHHHHHHH KDKRAPFGTYTQFSQEILSKSHGQE HHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA