| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009337
Identifier: 150009337
GI number: 150009337
Start: 3265682
End: 3267067
Strand: Reverse
Name: 150009337
Synonym: BDI_2744
Alternate gene names: NA
Gene position: 3267067-3265682 (Counterclockwise)
Preceding gene: 150009338
Following gene: 150009336
Centisome position: 67.9
GC content: 38.82
Gene sequence:
>1386_bases ATGAAAGTAAAATATATAGCAGCAATATTACTCAGTACCCAATTAGTCTATACGGCATGTGATGACATGGGATTTCTACA AATAAAACCAGATAGTTTAGAACTGACAGATGATCGTATTAAGACGGTAGATGATTTGGAGAATTTATTGTTGGGTGCTT ATAATGGAATACGTTCTTCGGGCTTTTGGGGAGGCCGGACGTTGCGTGGTTTTGATGTGATCGCAGATGATGGTGTGGCA GATGTGGCTACTTTTGAATGGGTTCAGATGAGTGCTCATACAATGAATTTGGTAAATGCGGTTGGACGTGATACCTGGAC TGCGACATATAATGCCATAAATATGGCGAATCAAGTTGCGTTTAGCGATTTAGGGGAAAGTATCTTGGCGAGTGATCCTC AGAAAGAAGCTCAATTTAAGGCTGAGGCATCTTTTATTCGTGCATTAGGATATTTTCATTTAGTAAGAGCCTTTGGTCTT CCTTATGCAGAGGAGACTAAGGATATCGCAGAGATGGGAGTTCCCCTTCGTTTAAGGGGGGTGATGGATCGTGCTACCGC ATTTGAGGTCGTACAACGTTCAACGGTCTCTGAAGTTTATTCTCAAATAATCTCAGATTTGGAATATGCGATCGGGAATT TACCTGGAGAGAACAAAGTAGAGTCTGGTAGAGCGACTGTTGATGGCGCAAAAGCGTTATTGGCAAAAGTGTATTTTTAT AAACATGATTTTGGCAATGCGGCTAAATATGCGGAACAAGTTATTAATACTCAGAAGTATGATCTTGATGAGGATTTGAC TGCTAAATTCGGTAGAGCGGAAAAAAAGACTGTTACGCAAGAAATTGTAGCGATGATACCTTCTGCGTCATTGATTGAGG ATTCTTGGGGTGGTTTAAGAGATTATCGTACGAATGGATTGGCTTTACCCACAAGCAGGCCGTCTAATGAGTTGATTGCT GCTTATGACCAACAAAATGATAATCGTTTTAAAACGTTTTTTAAAAATATAGACGGTTCATGGTATACTCTGAAGTTTGA TTATGAGTATATGGATGGTATTATTATTGGATATAATGAGTTGTTACTACTTTATGCCGAGTCTTTAGCTGAATCGAATG GAAATATGAATCAAGCTTTGAATGCTTTGCAAAAAATAGAAAAAAGGGCTTATGGCAAAGCTAATACTACAACTACGGAT AGGGCTTCTTTTATTAAAGCAGTACAGAAGGAACGTCGTTTGGAAATAGCTTTACAAGGTGAGAGATTATTTGAATTGAA GCGTATCAAACAGTCGGTTCGTGGTGAAGCTTGGGATTCTCATAAAGTGATGTTTCAGATTCCGGATGTTGAGCAGAATG GTAATCCTGATGTTAATATGAATTAA
Upstream 100 bases:
>100_bases TCAGAAGAGGAATTTGAGTTTGAATGTGACTTATTTAACACCTCCTCAAGCTCGTACATATACTATCGGATTAAGTGTTA ACTTTTAAATGAATAAGATT
Downstream 100 bases:
>100_bases CTTGGCTGTTTAAAAAGGGTGAGTTTGGCTCACCCTTTATTTGCTTTTACATCTAAATGATTATAGCTATGATTAGAAAA ATAATAATATTTACTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Ragb/Susd Domain Protein; Outer Membrane Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; RagB/SusD Family Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKVKYIAAILLSTQLVYTACDDMGFLQIKPDSLELTDDRIKTVDDLENLLLGAYNGIRSSGFWGGRTLRGFDVIADDGVA DVATFEWVQMSAHTMNLVNAVGRDTWTATYNAINMANQVAFSDLGESILASDPQKEAQFKAEASFIRALGYFHLVRAFGL PYAEETKDIAEMGVPLRLRGVMDRATAFEVVQRSTVSEVYSQIISDLEYAIGNLPGENKVESGRATVDGAKALLAKVYFY KHDFGNAAKYAEQVINTQKYDLDEDLTAKFGRAEKKTVTQEIVAMIPSASLIEDSWGGLRDYRTNGLALPTSRPSNELIA AYDQQNDNRFKTFFKNIDGSWYTLKFDYEYMDGIIIGYNELLLLYAESLAESNGNMNQALNALQKIEKRAYGKANTTTTD RASFIKAVQKERRLEIALQGERLFELKRIKQSVRGEAWDSHKVMFQIPDVEQNGNPDVNMN
Sequences:
>Translated_461_residues MKVKYIAAILLSTQLVYTACDDMGFLQIKPDSLELTDDRIKTVDDLENLLLGAYNGIRSSGFWGGRTLRGFDVIADDGVA DVATFEWVQMSAHTMNLVNAVGRDTWTATYNAINMANQVAFSDLGESILASDPQKEAQFKAEASFIRALGYFHLVRAFGL PYAEETKDIAEMGVPLRLRGVMDRATAFEVVQRSTVSEVYSQIISDLEYAIGNLPGENKVESGRATVDGAKALLAKVYFY KHDFGNAAKYAEQVINTQKYDLDEDLTAKFGRAEKKTVTQEIVAMIPSASLIEDSWGGLRDYRTNGLALPTSRPSNELIA AYDQQNDNRFKTFFKNIDGSWYTLKFDYEYMDGIIIGYNELLLLYAESLAESNGNMNQALNALQKIEKRAYGKANTTTTD RASFIKAVQKERRLEIALQGERLFELKRIKQSVRGEAWDSHKVMFQIPDVEQNGNPDVNMN >Mature_461_residues MKVKYIAAILLSTQLVYTACDDMGFLQIKPDSLELTDDRIKTVDDLENLLLGAYNGIRSSGFWGGRTLRGFDVIADDGVA DVATFEWVQMSAHTMNLVNAVGRDTWTATYNAINMANQVAFSDLGESILASDPQKEAQFKAEASFIRALGYFHLVRAFGL PYAEETKDIAEMGVPLRLRGVMDRATAFEVVQRSTVSEVYSQIISDLEYAIGNLPGENKVESGRATVDGAKALLAKVYFY KHDFGNAAKYAEQVINTQKYDLDEDLTAKFGRAEKKTVTQEIVAMIPSASLIEDSWGGLRDYRTNGLALPTSRPSNELIA AYDQQNDNRFKTFFKNIDGSWYTLKFDYEYMDGIIIGYNELLLLYAESLAESNGNMNQALNALQKIEKRAYGKANTTTTD RASFIKAVQKERRLEIALQGERLFELKRIKQSVRGEAWDSHKVMFQIPDVEQNGNPDVNMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51649; Mature: 51649
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKYIAAILLSTQLVYTACDDMGFLQIKPDSLELTDDRIKTVDDLENLLLGAYNGIRSS CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GFWGGRTLRGFDVIADDGVADVATFEWVQMSAHTMNLVNAVGRDTWTATYNAINMANQVA CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FSDLGESILASDPQKEAQFKAEASFIRALGYFHLVRAFGLPYAEETKDIAEMGVPLRLRG HHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHH VMDRATAFEVVQRSTVSEVYSQIISDLEYAIGNLPGENKVESGRATVDGAKALLAKVYFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KHDFGNAAKYAEQVINTQKYDLDEDLTAKFGRAEKKTVTQEIVAMIPSASLIEDSWGGLR HCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCHH DYRTNGLALPTSRPSNELIAAYDQQNDNRFKTFFKNIDGSWYTLKFDYEYMDGIIIGYNE HHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEHHHHCCEEECHHH LLLLYAESLAESNGNMNQALNALQKIEKRAYGKANTTTTDRASFIKAVQKERRLEIALQG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECC ERLFELKRIKQSVRGEAWDSHKVMFQIPDVEQNGNPDVNMN HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKVKYIAAILLSTQLVYTACDDMGFLQIKPDSLELTDDRIKTVDDLENLLLGAYNGIRSS CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GFWGGRTLRGFDVIADDGVADVATFEWVQMSAHTMNLVNAVGRDTWTATYNAINMANQVA CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FSDLGESILASDPQKEAQFKAEASFIRALGYFHLVRAFGLPYAEETKDIAEMGVPLRLRG HHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHH VMDRATAFEVVQRSTVSEVYSQIISDLEYAIGNLPGENKVESGRATVDGAKALLAKVYFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KHDFGNAAKYAEQVINTQKYDLDEDLTAKFGRAEKKTVTQEIVAMIPSASLIEDSWGGLR HCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCHH DYRTNGLALPTSRPSNELIAAYDQQNDNRFKTFFKNIDGSWYTLKFDYEYMDGIIIGYNE HHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEHHHHCCEEECHHH LLLLYAESLAESNGNMNQALNALQKIEKRAYGKANTTTTDRASFIKAVQKERRLEIALQG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECC ERLFELKRIKQSVRGEAWDSHKVMFQIPDVEQNGNPDVNMN HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA