| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yehU [C]
Identifier: 150009287
GI number: 150009287
Start: 3196214
End: 3197272
Strand: Reverse
Name: yehU [C]
Synonym: BDI_2689
Alternate gene names: 150009287
Gene position: 3197272-3196214 (Counterclockwise)
Preceding gene: 150009288
Following gene: 150009286
Centisome position: 66.45
GC content: 40.23
Gene sequence:
>1059_bases ATGAAAAAGATATATAAGTGGGTATATGCCATGATTTTTGCGGTCTCTTTGTATTCTTGTATCCGCTGGGTAACGGATTA TACGAAAGAAGGACACTATTGGACACAGTCCTTGGGGAATAGTATCTTAGAAATCGTGATCCTTGCTTTTGTCTCTTATT TGTTTTTTATTTATTTCAGATGGCAGATCGAGAAGAGCCGAAGAGCGAAAGAACCGAATAGATGGAAATTTGTTTGGAGA TCGTATGGAATGCCTTTCTTATTGATTATATTGGGTGTGAATGCTACGTTGGCAATAACCCGTATATTTACCGGTGATGC TTTCCATATGGACGATATAATAATCGCGAACGTGATAGGGTGTTTGTTTGCGTTTATGGTCTATAATGTTCAGCGAGCTC AAGTATTGGATAAAGATTACGCCGAGCAGCGTATCCAACTGGAAAAGATCAAGAATGATCAATTACAGACGGAATTGAAG TTCTTGAAATCCCAATATCATCCTCACTTCTTGTTTAATGCGCTTAATACCGTTTATTTCCAGATTGATGAAAGTAACAA GGCGCCTCGTCGCACGTTAGAGATGATATCCGAACTCTTGCGTTACCAACTGTATGGCGGTAATCAGAAGGTCAGTATCC TACAAGAAATTGATTATTTGAAAACTTATATAGCTTTGCGTAAGCTTCGTATGAGTGAACGCCTGCGGTTGCGTGTAGAG TTTCCGCCCGAATTGAATGAACTGAATATTTATCCGTTACTCTTCCTCCCGTTGGTAGAGAACGCTTTTAAATACGTAGG TGGCGATTATCAATTGGATATTATCATGAAATGGGAAAATAACCGGATCAGTTTGTTTATACGAAACTCCATCCCCGAGC TTTCAGCGGAGGACGAAGCGTTGCGTAAATCGGTGGATGAACGGCAACGTAAAGGCATCGGTCTGGTAAATTTACGCCGC CGATTATCTTTGTTGTATCCCAATAAGCACCGTTTGGAAACCCGGAAAGAAGAGACTGAGTTCGTAGCGGAATTAATGAT TGAAATAGAAGATATATGA
Upstream 100 bases:
>100_bases ATCGTATAAATCGTGGTTTGGAGGTGAAAGAATCTCGCCGGAAGCATAGCGTAGATGAAAGTAAAAGAATAAATTTGTGA AACCTCTAGACAAATGGTTT
Downstream 100 bases:
>100_bases CAATAACCTGCGTGATAACAGATGATGAGCCGATGGCCCGTAAAGGATTGCAATCGTATGTGGAGCGAGTGGATTTTCTC TCCTTGACCGGTGTATGTGA
Product: putative two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKKIYKWVYAMIFAVSLYSCIRWVTDYTKEGHYWTQSLGNSILEIVILAFVSYLFFIYFRWQIEKSRRAKEPNRWKFVWR SYGMPFLLIILGVNATLAITRIFTGDAFHMDDIIIANVIGCLFAFMVYNVQRAQVLDKDYAEQRIQLEKIKNDQLQTELK FLKSQYHPHFLFNALNTVYFQIDESNKAPRRTLEMISELLRYQLYGGNQKVSILQEIDYLKTYIALRKLRMSERLRLRVE FPPELNELNIYPLLFLPLVENAFKYVGGDYQLDIIMKWENNRISLFIRNSIPELSAEDEALRKSVDERQRKGIGLVNLRR RLSLLYPNKHRLETRKEETEFVAELMIEIEDI
Sequences:
>Translated_352_residues MKKIYKWVYAMIFAVSLYSCIRWVTDYTKEGHYWTQSLGNSILEIVILAFVSYLFFIYFRWQIEKSRRAKEPNRWKFVWR SYGMPFLLIILGVNATLAITRIFTGDAFHMDDIIIANVIGCLFAFMVYNVQRAQVLDKDYAEQRIQLEKIKNDQLQTELK FLKSQYHPHFLFNALNTVYFQIDESNKAPRRTLEMISELLRYQLYGGNQKVSILQEIDYLKTYIALRKLRMSERLRLRVE FPPELNELNIYPLLFLPLVENAFKYVGGDYQLDIIMKWENNRISLFIRNSIPELSAEDEALRKSVDERQRKGIGLVNLRR RLSLLYPNKHRLETRKEETEFVAELMIEIEDI >Mature_352_residues MKKIYKWVYAMIFAVSLYSCIRWVTDYTKEGHYWTQSLGNSILEIVILAFVSYLFFIYFRWQIEKSRRAKEPNRWKFVWR SYGMPFLLIILGVNATLAITRIFTGDAFHMDDIIIANVIGCLFAFMVYNVQRAQVLDKDYAEQRIQLEKIKNDQLQTELK FLKSQYHPHFLFNALNTVYFQIDESNKAPRRTLEMISELLRYQLYGGNQKVSILQEIDYLKTYIALRKLRMSERLRLRVE FPPELNELNIYPLLFLPLVENAFKYVGGDYQLDIIMKWENNRISLFIRNSIPELSAEDEALRKSVDERQRKGIGLVNLRR RLSLLYPNKHRLETRKEETEFVAELMIEIEDI
Specific function: Probable member of the two-component regulatory system SAB0162c/SAB0161c. May activate SAB0161c by phosphorylation [H]
COG id: COG3275
COG function: function code T; Putative regulator of cell autolysis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788446, Length=192, Percent_Identity=29.6875, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788723, Length=208, Percent_Identity=29.3269230769231, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR010559 [H]
Pfam domain/function: PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42067; Mature: 42067
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYKWVYAMIFAVSLYSCIRWVTDYTKEGHYWTQSLGNSILEIVILAFVSYLFFIYFR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQIEKSRRAKEPNRWKFVWRSYGMPFLLIILGVNATLAITRIFTGDAFHMDDIIIANVIG EEECHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH CLFAFMVYNVQRAQVLDKDYAEQRIQLEKIKNDQLQTELKFLKSQYHPHFLFNALNTVYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHEEE QIDESNKAPRRTLEMISELLRYQLYGGNQKVSILQEIDYLKTYIALRKLRMSERLRLRVE EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE FPPELNELNIYPLLFLPLVENAFKYVGGDYQLDIIMKWENNRISLFIRNSIPELSAEDEA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCHHH LRKSVDERQRKGIGLVNLRRRLSLLYPNKHRLETRKEETEFVAELMIEIEDI HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIYKWVYAMIFAVSLYSCIRWVTDYTKEGHYWTQSLGNSILEIVILAFVSYLFFIYFR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQIEKSRRAKEPNRWKFVWRSYGMPFLLIILGVNATLAITRIFTGDAFHMDDIIIANVIG EEECHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH CLFAFMVYNVQRAQVLDKDYAEQRIQLEKIKNDQLQTELKFLKSQYHPHFLFNALNTVYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHEEE QIDESNKAPRRTLEMISELLRYQLYGGNQKVSILQEIDYLKTYIALRKLRMSERLRLRVE EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE FPPELNELNIYPLLFLPLVENAFKYVGGDYQLDIIMKWENNRISLFIRNSIPELSAEDEA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCHHH LRKSVDERQRKGIGLVNLRRRLSLLYPNKHRLETRKEETEFVAELMIEIEDI HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA