Click here to switch to the map view.

The map label for this gene is yehT [C]

Identifier: 150009286

GI number: 150009286

Start: 3195522

End: 3196217

Strand: Reverse

Name: yehT [C]

Synonym: BDI_2688

Alternate gene names: 150009286

Gene position: 3196217-3195522 (Counterclockwise)

Preceding gene: 150009287

Following gene: 150009279

Centisome position: 66.43

GC content: 43.25

Gene sequence:

>696_bases
ATGACAATAACCTGCGTGATAACAGATGATGAGCCGATGGCCCGTAAAGGATTGCAATCGTATGTGGAGCGAGTGGATTT
TCTCTCCTTGACCGGTGTATGTGAGGACGCTATCCAATTAAATACCCTGTTGAAAACTCAGCAGCCGGATTTACTTTTGT
TAGATATCGAGATGCCTTATCTTTCCGGTTTGGATTTATTGGCGACCTTAAACCAGCCTCCCAAAGTGATCGTTACTTCC
GCTTATGAGCAATATGCCTTGAAAGGGTATGAGCTGGATGTCGTGGATTATTTGCTGAAGCCTATTTCCTTTGAGCGTTT
CTTAAAAGGCGTGAATAAGGTGCACGACCTGTTGGCTCGGGAGAATACGCCGGATGCGGATGCCTCGTTCTTCGTGAAAA
GCGAGAAGCAAATGCGTAAGATCTACCTAAGAGATATCTTATTTGTAGAGGCGTTGGAAAATTATGTTAGTATCTATACT
ACTTCCGGTAGAGTATTGACCCATTCAACCTTGAAGCGGATCGGGGAATCCCTACCCGATGATCAATTTCTCCAAACGCA
TAAATCGTATATAATTAATGCGGATCGTGTCGATCTGGTAGAAGGGAATAGATTACGTATCGAATCCTATCAAATCCCGA
TCGCCCGTAATCTCAGAGATGTTGTATTTAAGCGTATCCTTAAGAATACGTTGTAA

Upstream 100 bases:

>100_bases
GCCGCCGATTATCTTTGTTGTATCCCAATAAGCACCGTTTGGAAACCCGGAAAGAAGAGACTGAGTTCGTAGCGGAATTA
ATGATTGAAATAGAAGATAT

Downstream 100 bases:

>100_bases
TTATATGACTGTAGCTAGGTCATAGAGATGCGGCACATGCCGCGTCTCTACAACTGGGTATTTTGTTATTTGAATAACAT
TGGGGCGAATTTTGTGAGGT

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTITCVITDDEPMARKGLQSYVERVDFLSLTGVCEDAIQLNTLLKTQQPDLLLLDIEMPYLSGLDLLATLNQPPKVIVTS
AYEQYALKGYELDVVDYLLKPISFERFLKGVNKVHDLLARENTPDADASFFVKSEKQMRKIYLRDILFVEALENYVSIYT
TSGRVLTHSTLKRIGESLPDDQFLQTHKSYIINADRVDLVEGNRLRIESYQIPIARNLRDVVFKRILKNTL

Sequences:

>Translated_231_residues
MTITCVITDDEPMARKGLQSYVERVDFLSLTGVCEDAIQLNTLLKTQQPDLLLLDIEMPYLSGLDLLATLNQPPKVIVTS
AYEQYALKGYELDVVDYLLKPISFERFLKGVNKVHDLLARENTPDADASFFVKSEKQMRKIYLRDILFVEALENYVSIYT
TSGRVLTHSTLKRIGESLPDDQFLQTHKSYIINADRVDLVEGNRLRIESYQIPIARNLRDVVFKRILKNTL
>Mature_230_residues
TITCVITDDEPMARKGLQSYVERVDFLSLTGVCEDAIQLNTLLKTQQPDLLLLDIEMPYLSGLDLLATLNQPPKVIVTSA
YEQYALKGYELDVVDYLLKPISFERFLKGVNKVHDLLARENTPDADASFFVKSEKQMRKIYLRDILFVEALENYVSIYTT
SGRVLTHSTLKRIGESLPDDQFLQTHKSYIINADRVDLVEGNRLRIESYQIPIARNLRDVVFKRILKNTL

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=205, Percent_Identity=28.2926829268293, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788724, Length=230, Percent_Identity=22.6086956521739, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26505; Mature: 26374

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITCVITDDEPMARKGLQSYVERVDFLSLTGVCEDAIQLNTLLKTQQPDLLLLDIEMPY
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
LSGLDLLATLNQPPKVIVTSAYEQYALKGYELDVVDYLLKPISFERFLKGVNKVHDLLAR
CCCCHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
ENTPDADASFFVKSEKQMRKIYLRDILFVEALENYVSIYTTSGRVLTHSTLKRIGESLPD
CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHCCCC
DQFLQTHKSYIINADRVDLVEGNRLRIESYQIPIARNLRDVVFKRILKNTL
HHHHHHHHHHEECCCCEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TITCVITDDEPMARKGLQSYVERVDFLSLTGVCEDAIQLNTLLKTQQPDLLLLDIEMPY
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
LSGLDLLATLNQPPKVIVTSAYEQYALKGYELDVVDYLLKPISFERFLKGVNKVHDLLAR
CCCCHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
ENTPDADASFFVKSEKQMRKIYLRDILFVEALENYVSIYTTSGRVLTHSTLKRIGESLPD
CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHCCCC
DQFLQTHKSYIINADRVDLVEGNRLRIESYQIPIARNLRDVVFKRILKNTL
HHHHHHHHHHEECCCCEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]