| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is surE
Identifier: 150009233
GI number: 150009233
Start: 3116735
End: 3117502
Strand: Direct
Name: surE
Synonym: BDI_2635
Alternate gene names: 150009233
Gene position: 3116735-3117502 (Clockwise)
Preceding gene: 150009232
Following gene: 150009234
Centisome position: 64.78
GC content: 50.78
Gene sequence:
>768_bases ATGACAAACGAGAGACCGTTGATTCTGATTACGAATGATGATGGCGTATGGGCCAAAGGTATTAACGAATTGATTGAGTG CCTGAAAGATCTAGGCGATTTGGTGGTATTCGCTCCCGATGGACCTCGTTCCGGGATGGGTAGTGCCATTACATCTTTAG TTCCTATCAAGTATACCTTGTTGAAAAAGGAGGAAGGACTTACCATCTATAGTTGCACCGGGACACCGGTTGATTGCGTT AAATTAGCGATTAATGAGGTTTTGGAGCGCAAGCCCGATCTGTTAGTCTCCGGTATCAACCACGGGGGGAATATGGCTAT CTGCGTAAATTATTCCGGAACGATGGGTGCCGCCGCCGAGGGATGTATTTTCAACGTCCCTTCCATGGGTGTATCCTTAC TGGACCATGCGGCCGATGCCGACTTCTCCGAATGCTGCCGTCTTGGACGTATGCTGGCACGCCGGGTATTAAAAGAAGGC TTACCGCACGGAACCTACTTAAACCTCAACGTGCCGAAGCTACCGCAAGTGAAAGGGTTGAAAGTTTGTCGCCAAGCGGA TGGCCGTTGGGTACGTGAATTCAAGCGTTCCGAGAACGCCAGCGGAGAGCCCGTATTCTGGTTGACAGGAGCTTTCGAAA GCGCCAAACCCATCCACCCGGACAATGATATGCTTGCGCTGGACAGCGGATACGCCTCCCTAGTCCCCTGCAAGATTGAC GTTACGGACTACGACTTCATGGCCACCCTAAACAACTGGATCCTTTAA
Upstream 100 bases:
>100_bases ACAACTGATTAGGCGAAAGGACAACTCCCATCCCTCACACCCCAACCATTGTTCGCAAATTATTGTTACCTTTGTACGAC AACTATAAGGATAAAACGAT
Downstream 100 bases:
>100_bases TTCTCAATTCTCAATTTTCAATTCATGAAGTATTACCTGATAGCCGGAGAAGCCTCCGGAGACCTGCACGCCTCGAATTT GATGGCAGCCCTGAAAGAGA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTNERPLILITNDDGVWAKGINELIECLKDLGDLVVFAPDGPRSGMGSAITSLVPIKYTLLKKEEGLTIYSCTGTPVDCV KLAINEVLERKPDLLVSGINHGGNMAICVNYSGTMGAAAEGCIFNVPSMGVSLLDHAADADFSECCRLGRMLARRVLKEG LPHGTYLNLNVPKLPQVKGLKVCRQADGRWVREFKRSENASGEPVFWLTGAFESAKPIHPDNDMLALDSGYASLVPCKID VTDYDFMATLNNWIL
Sequences:
>Translated_255_residues MTNERPLILITNDDGVWAKGINELIECLKDLGDLVVFAPDGPRSGMGSAITSLVPIKYTLLKKEEGLTIYSCTGTPVDCV KLAINEVLERKPDLLVSGINHGGNMAICVNYSGTMGAAAEGCIFNVPSMGVSLLDHAADADFSECCRLGRMLARRVLKEG LPHGTYLNLNVPKLPQVKGLKVCRQADGRWVREFKRSENASGEPVFWLTGAFESAKPIHPDNDMLALDSGYASLVPCKID VTDYDFMATLNNWIL >Mature_254_residues TNERPLILITNDDGVWAKGINELIECLKDLGDLVVFAPDGPRSGMGSAITSLVPIKYTLLKKEEGLTIYSCTGTPVDCVK LAINEVLERKPDLLVSGINHGGNMAICVNYSGTMGAAAEGCIFNVPSMGVSLLDHAADADFSECCRLGRMLARRVLKEGL PHGTYLNLNVPKLPQVKGLKVCRQADGRWVREFKRSENASGEPVFWLTGAFESAKPIHPDNDMLALDSGYASLVPCKIDV TDYDFMATLNNWIL
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=250, Percent_Identity=34.8, Blast_Score=138, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_PARD8 (A6LF90)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001303976.1 - ProteinModelPortal: A6LF90 - SMR: A6LF90 - STRING: A6LF90 - GeneID: 5307784 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2635 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: DCVKMGI - ProtClustDB: PRK00346 - BioCyc: PDIS435591:BDI_2635-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27746; Mature: 27615
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNERPLILITNDDGVWAKGINELIECLKDLGDLVVFAPDGPRSGMGSAITSLVPIKYTL CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHEEEE LKKEEGLTIYSCTGTPVDCVKLAINEVLERKPDLLVSGINHGGNMAICVNYSGTMGAAAE EECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCC GCIFNVPSMGVSLLDHAADADFSECCRLGRMLARRVLKEGLPHGTYLNLNVPKLPQVKGL CEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH KVCRQADGRWVREFKRSENASGEPVFWLTGAFESAKPIHPDNDMLALDSGYASLVPCKID HHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEE VTDYDFMATLNNWIL CCCCHHHHHHHHCCC >Mature Secondary Structure TNERPLILITNDDGVWAKGINELIECLKDLGDLVVFAPDGPRSGMGSAITSLVPIKYTL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHEEEE LKKEEGLTIYSCTGTPVDCVKLAINEVLERKPDLLVSGINHGGNMAICVNYSGTMGAAAE EECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCC GCIFNVPSMGVSLLDHAADADFSECCRLGRMLARRVLKEGLPHGTYLNLNVPKLPQVKGL CEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH KVCRQADGRWVREFKRSENASGEPVFWLTGAFESAKPIHPDNDMLALDSGYASLVPCKID HHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEE VTDYDFMATLNNWIL CCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA