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The map label for this gene is bkdR [H]

Identifier: 150009149

GI number: 150009149

Start: 3023391

End: 3023861

Strand: Reverse

Name: bkdR [H]

Synonym: BDI_2551

Alternate gene names: 150009149

Gene position: 3023861-3023391 (Counterclockwise)

Preceding gene: 150009151

Following gene: 150009148

Centisome position: 62.85

GC content: 39.7

Gene sequence:

>471_bases
ATGAATGTTTCAGATAAGTTAGACAAGGTGGATCTGCAAATCCTCCGAACGTTACAAGATAATGCCCGGTTGACTACGAA
AGAGTTGGCGGCAAGGGTCAGTCTCTCGTCAACCCCGGTGTTCGAGCGTTTAAAACGTCTTGAGAATAGTGGATATATAA
AGAAGTATATAGCGGTACTAGATGCGGAGAAACTGAATCAAGGCTTTGTTGTCTTTTGTAGCGTGAAATTGGTTCGGCTG
AATAAGGATATAGCTTTTGAGTTTACCCGGATTATTCAAGAAATCCCCGAGGTAACGGAGTGCTATAATATTTCAGGCGA
TTATGATTACTTATTGAAGATACACGCTCCCAATATGAAATATTATCAAGAGTTTATTTTAAATGTGTTAGGAACGATCG
ATAGTTTGGGCTCGTTGAGAAGTACTTTTGTCATGGACGAGGTTAAACACGACTATGGGATCCATATTTAA

Upstream 100 bases:

>100_bases
TCGTTGAGAATATAGAAAATAATACTATTTTTAGGGCTATAAATAGAATACATCTTCGGCGAAGGACGCTGGGGAATCAA
TCCGATAGAATTTTTTTCTT

Downstream 100 bases:

>100_bases
GCAGTAGATATTCTATTTTTGTCTTTTGTTAGGGTTTCCTTCCAAATATTTGTATATATTTGTGGCTATACAGTATAAAA
ATGGGAGGTGTAAAACCATG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNVSDKLDKVDLQILRTLQDNARLTTKELAARVSLSSTPVFERLKRLENSGYIKKYIAVLDAEKLNQGFVVFCSVKLVRL
NKDIAFEFTRIIQEIPEVTECYNISGDYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLRSTFVMDEVKHDYGIHI

Sequences:

>Translated_156_residues
MNVSDKLDKVDLQILRTLQDNARLTTKELAARVSLSSTPVFERLKRLENSGYIKKYIAVLDAEKLNQGFVVFCSVKLVRL
NKDIAFEFTRIIQEIPEVTECYNISGDYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLRSTFVMDEVKHDYGIHI
>Mature_156_residues
MNVSDKLDKVDLQILRTLQDNARLTTKELAARVSLSSTPVFERLKRLENSGYIKKYIAVLDAEKLNQGFVVFCSVKLVRL
NKDIAFEFTRIIQEIPEVTECYNISGDYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLRSTFVMDEVKHDYGIHI

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=38.1944444444444, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17984; Mature: 17984

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSDKLDKVDLQILRTLQDNARLTTKELAARVSLSSTPVFERLKRLENSGYIKKYIAVL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
DAEKLNQGFVVFCSVKLVRLNKDIAFEFTRIIQEIPEVTECYNISGDYDYLLKIHAPNMK
HHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
YYQEFILNVLGTIDSLGSLRSTFVMDEVKHDYGIHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNVSDKLDKVDLQILRTLQDNARLTTKELAARVSLSSTPVFERLKRLENSGYIKKYIAVL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
DAEKLNQGFVVFCSVKLVRLNKDIAFEFTRIIQEIPEVTECYNISGDYDYLLKIHAPNMK
HHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
YYQEFILNVLGTIDSLGSLRSTFVMDEVKHDYGIHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]