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The map label for this gene is yebA [C]

Identifier: 150009142

GI number: 150009142

Start: 3012519

End: 3013502

Strand: Direct

Name: yebA [C]

Synonym: BDI_2544

Alternate gene names: 150009142

Gene position: 3012519-3013502 (Clockwise)

Preceding gene: 150009139

Following gene: 150009143

Centisome position: 62.61

GC content: 46.34

Gene sequence:

>984_bases
ATGAAACTCTTTAAAAGTCGCAAAACATACTATTTATACAATCCGAACACTCTCAATTATGAGCGTGTATACCCATCTAG
CAAAGACCGGCTGTTCACCGTTCTCCGCCATTTAAGCACCGGAATAGCGTTCGGCGTAGCCACTTTTTTCGTCATGATGC
ATTTGGTGGACTCTCCGATGGAATCTCAGTTACGTAAGGAGAACCGCCTATTGCAAACTCAATACGAGGTGCTTTCCCTT
CGCTTAAATAACGCGTTAGACGTATTGGATGATATCCAACAGCGTGACGAGAATCTGTACCGGGCGATCTTCCAAGCCGA
GTCCATCCCCGAGTCCGTTCGGAAAGCCGGGTTTGGAGGGACAAACCGTTACGAGCATTTGATGAGCCTGTCCAATCCGG
AGCTTGTTGTCTCCACGACCCAAAAGATGGATATGCTACGTAAGCAATTATATATCCAATCCAATTCCTTGGAAGAACTG
ATCTCTCTAGGAAAGAACCAAGAAGAGAGAAGTAAATGTATCCCGGCGATCCAGCCGATTTCCAATAAGGATCTGCGTCG
TACCGCTTCCGGCTATGGCGTACGTATCGACCCGATTTACCGTACACCTCGTTTCCATTCCGGAATGGATTTCTCGGCTA
AAGTGGGAACGGAGATCTATGCGACAGGTAATGGCGTTGTCACTTTCGCCGCTTGGAAACAGGGATACGGAAATTGTTTG
ATTATCGATCATGGCTACGGCTATCAGACTTTATACGGTCATATGAGTAAGTTCAAGAAACGTGTCGGACAAAAGGTTAC
TCGTGGAGAGGTGATTGGCGAGGTTGGAAATACCGGGAAATCTACCGGCCCTCACTTGCATTATGAGGTAATCGTACGAG
GGAAGTATGATAACCCATCTAAATACTATTACATGGATCTCTCACCTGAGGAATACGACCGTATGATCCAGATTGCCGAG
AATCATGGTCAGGTTATGGATTAA

Upstream 100 bases:

>100_bases
ATAATCTATTTATATAGTTCTCGTTAATATTCTGAAAAACAATTTGCAAAAGTACTGCAAATTATTATTTTTGCGTGCAT
TCAGATAACAAAAAATGTAG

Downstream 100 bases:

>100_bases
ACTTCATTAGCAGTATGAGTCTAAAAAAGAATAAAGATCTCAAACTCTATTTTTCCATCAGCGAGGTGGCGCAGATGTTC
GACGTGAACGAGTCCACCCT

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKLFKSRKTYYLYNPNTLNYERVYPSSKDRLFTVLRHLSTGIAFGVATFFVMMHLVDSPMESQLRKENRLLQTQYEVLSL
RLNNALDVLDDIQQRDENLYRAIFQAESIPESVRKAGFGGTNRYEHLMSLSNPELVVSTTQKMDMLRKQLYIQSNSLEEL
ISLGKNQEERSKCIPAIQPISNKDLRRTASGYGVRIDPIYRTPRFHSGMDFSAKVGTEIYATGNGVVTFAAWKQGYGNCL
IIDHGYGYQTLYGHMSKFKKRVGQKVTRGEVIGEVGNTGKSTGPHLHYEVIVRGKYDNPSKYYYMDLSPEEYDRMIQIAE
NHGQVMD

Sequences:

>Translated_327_residues
MKLFKSRKTYYLYNPNTLNYERVYPSSKDRLFTVLRHLSTGIAFGVATFFVMMHLVDSPMESQLRKENRLLQTQYEVLSL
RLNNALDVLDDIQQRDENLYRAIFQAESIPESVRKAGFGGTNRYEHLMSLSNPELVVSTTQKMDMLRKQLYIQSNSLEEL
ISLGKNQEERSKCIPAIQPISNKDLRRTASGYGVRIDPIYRTPRFHSGMDFSAKVGTEIYATGNGVVTFAAWKQGYGNCL
IIDHGYGYQTLYGHMSKFKKRVGQKVTRGEVIGEVGNTGKSTGPHLHYEVIVRGKYDNPSKYYYMDLSPEEYDRMIQIAE
NHGQVMD
>Mature_327_residues
MKLFKSRKTYYLYNPNTLNYERVYPSSKDRLFTVLRHLSTGIAFGVATFFVMMHLVDSPMESQLRKENRLLQTQYEVLSL
RLNNALDVLDDIQQRDENLYRAIFQAESIPESVRKAGFGGTNRYEHLMSLSNPELVVSTTQKMDMLRKQLYIQSNSLEEL
ISLGKNQEERSKCIPAIQPISNKDLRRTASGYGVRIDPIYRTPRFHSGMDFSAKVGTEIYATGNGVVTFAAWKQGYGNCL
IIDHGYGYQTLYGHMSKFKKRVGQKVTRGEVIGEVGNTGKSTGPHLHYEVIVRGKYDNPSKYYYMDLSPEEYDRMIQIAE
NHGQVMD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=105, Percent_Identity=41.9047619047619, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082297, Length=95, Percent_Identity=36.8421052631579, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37552; Mature: 37552

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFKSRKTYYLYNPNTLNYERVYPSSKDRLFTVLRHLSTGIAFGVATFFVMMHLVDSPM
CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ESQLRKENRLLQTQYEVLSLRLNNALDVLDDIQQRDENLYRAIFQAESIPESVRKAGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
TNRYEHLMSLSNPELVVSTTQKMDMLRKQLYIQSNSLEELISLGKNQEERSKCIPAIQPI
CHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCC
SNKDLRRTASGYGVRIDPIYRTPRFHSGMDFSAKVGTEIYATGNGVVTFAAWKQGYGNCL
CCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHCCCCCEE
IIDHGYGYQTLYGHMSKFKKRVGQKVTRGEVIGEVGNTGKSTGPHLHYEVIVRGKYDNPS
EEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCC
KYYYMDLSPEEYDRMIQIAENHGQVMD
EEEEEECCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLFKSRKTYYLYNPNTLNYERVYPSSKDRLFTVLRHLSTGIAFGVATFFVMMHLVDSPM
CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ESQLRKENRLLQTQYEVLSLRLNNALDVLDDIQQRDENLYRAIFQAESIPESVRKAGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
TNRYEHLMSLSNPELVVSTTQKMDMLRKQLYIQSNSLEELISLGKNQEERSKCIPAIQPI
CHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCC
SNKDLRRTASGYGVRIDPIYRTPRFHSGMDFSAKVGTEIYATGNGVVTFAAWKQGYGNCL
CCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHCCCCCEE
IIDHGYGYQTLYGHMSKFKKRVGQKVTRGEVIGEVGNTGKSTGPHLHYEVIVRGKYDNPS
EEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCC
KYYYMDLSPEEYDRMIQIAENHGQVMD
EEEEEECCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]