| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is yehV [C]
Identifier: 150009143
GI number: 150009143
Start: 3013517
End: 3013873
Strand: Direct
Name: yehV [C]
Synonym: BDI_2545
Alternate gene names: 150009143
Gene position: 3013517-3013873 (Clockwise)
Preceding gene: 150009142
Following gene: 150009144
Centisome position: 62.63
GC content: 47.06
Gene sequence:
>357_bases ATGAGTCTAAAAAAGAATAAAGATCTCAAACTCTATTTTTCCATCAGCGAGGTGGCGCAGATGTTCGACGTGAACGAGTC CACCCTTCGCTTTTGGGAGAAGGAGTTCGATATCATCAATCCAAGGAAGACGAGCAAAGGTACCCGTTTTTACAAGCAGG AGGATATCGACGCGGTACGCCTCATCTACCATCTGGTTAAAGAGAGAGGGATGACCTTGGCCGGCGCACGGCAAAAACTG AAGGACAATAAAGAGACGACGATCCGGCAAGAAGAGATCGTAAACCGCCTGAAACAGATCAAAGAAGAGCTGTTAGCTAT GAAAGACGCATTCGATGCTTTTGCCCCGAAAGTGTGA
Upstream 100 bases:
>100_bases CTAAATACTATTACATGGATCTCTCACCTGAGGAATACGACCGTATGATCCAGATTGCCGAGAATCATGGTCAGGTTATG GATTAAACTTCATTAGCAGT
Downstream 100 bases:
>100_bases TTATTCTGTTGATAAAACCAGAACAAAACCGTACCTTCGTCCCCAATTAAATAAAACATAAGCAAATAAAATACAAGACA TGGAAATTACAGGAAAAATT
Product: transcriptional regulator
Products: NA
Alternate protein names: MerR Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Transcriptional Regulator Protein; Transcription Regulator Protein; HTH-Type Transcriptional Regulator; Regulatory Protein MerR
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSLKKNKDLKLYFSISEVAQMFDVNESTLRFWEKEFDIINPRKTSKGTRFYKQEDIDAVRLIYHLVKERGMTLAGARQKL KDNKETTIRQEEIVNRLKQIKEELLAMKDAFDAFAPKV
Sequences:
>Translated_118_residues MSLKKNKDLKLYFSISEVAQMFDVNESTLRFWEKEFDIINPRKTSKGTRFYKQEDIDAVRLIYHLVKERGMTLAGARQKL KDNKETTIRQEEIVNRLKQIKEELLAMKDAFDAFAPKV >Mature_117_residues SLKKNKDLKLYFSISEVAQMFDVNESTLRFWEKEFDIINPRKTSKGTRFYKQEDIDAVRLIYHLVKERGMTLAGARQKLK DNKETTIRQEEIVNRLKQIKEELLAMKDAFDAFAPKV
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13959; Mature: 13828
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKNKDLKLYFSISEVAQMFDVNESTLRFWEKEFDIINPRKTSKGTRFYKQEDIDAVR CCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LIYHLVKERGMTLAGARQKLKDNKETTIRQEEIVNRLKQIKEELLAMKDAFDAFAPKV HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLKKNKDLKLYFSISEVAQMFDVNESTLRFWEKEFDIINPRKTSKGTRFYKQEDIDAVR CCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LIYHLVKERGMTLAGARQKLKDNKETTIRQEEIVNRLKQIKEELLAMKDAFDAFAPKV HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA