Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is yuxL [H]

Identifier: 150009121

GI number: 150009121

Start: 2977196

End: 2979679

Strand: Direct

Name: yuxL [H]

Synonym: BDI_2522

Alternate gene names: 150009121

Gene position: 2977196-2979679 (Clockwise)

Preceding gene: 150009120

Following gene: 150009122

Centisome position: 61.88

GC content: 46.22

Gene sequence:

>2484_bases
ATGATAAACAAAAACATCTTAATTCTTTCAGCCCTATGCTCCTGTTGCTCACTATGGGCGGATGAGGTTGTCGTGCGACA
TTACAATTACGCCGGCCCTTACGAGGTGAAAAAGCCTTTCCTAGCAGATAGCTTGGATGTAAACAGTAAGAGATTTTCCG
ACAAGGAACTATTGAACACGACCGTTCCTTTCTGCAACCTTTCCCAAAGCGGACAAACCCTTGACGCGGCGTCTTCCGGA
GAGCTGACCTTGCCAACCTCGGCCTCTTCCTACGCGCTACATTTGGTTTCCTTCTACCTGAATAGTGACCGCTATACAAA
AGGTACCTTAAGGATCAATGGCCCTGAGATTTCAGAAGTCTACGTGGATGGACAACCCATAAAACTAACCCAAGGAGAAG
CCTCGTTGACCTTGGAGCCGCGACGCTATGAAATCGTAATTAAATATTTATCTGAGAGCCACAAAGAGAATGCCTTAAAA
GCCTCATTCAACCCGGAAAAAGACGCGGTGGTAACCGCGACCGTCAATCCGGAGAAACGTTATACATTAAGTGATGTATT
TGATGGTAAACGCATCCAATCCGCCAGCCTGTCCCCGAATGGAAAATTCATTATCGTCTCCTATCAAGAAACCTATCCCG
GCGGAAAGCAGTCCTCATTTACCCAGATACTAGACAAGGCTACCGGTTCCGTATTGGTTGAGAACGGACAGAGCTTACGC
TGGATGCCTAAAAGCAATCTGGCCTATTACACCCGGAAAGGGATGAAAGGCACGGAATTGGTGACCCTAGACCCTACCAG
TAAAAAGGAGAACATCCTTTCCAGCCAATTGCCTGAAGGTTCTTTCAGCTTCGGGCCTACCGAAGACTATCTATTATTCT
CCATACGGGAGAAAGGACCGCAAGAACGAAAAGAGATCCAAGAGATACTGGTGCCGGATGATCGCCAACCGGGATGGAGA
AACCGTATGTTTATCCATAAATATGACCTGCGAACCGGATTGTTCCAACGGCTCACCTATGGACATACTTCTACTTACAT
CAACGATGTATCTCAAGACGGCCACTATCTGCTATTCAGTCGCAGGGAACCGAATTTAACGGAGCGCCCTTTCTCACGTA
CATATATATATAAGATGGATCTACGAACCATGCATGTGGATACCCTTATAAAAGGTGAGAAATTCGTAAGCCGTGCCGTT
TTCTCCCCGGATGCCACCCAATTACTCGTTGACGCATCTGGAGAGGCTTTCGATGGTATCGGATTAAAGATCAAAGAAGG
ACAGACATCCAATACGAGCGACGGGCAATTATTCCTATACAATATAGCAGATAAAAGTATAAAGCCGCTTACGAAAGATT
TTGACCCCTCTGTCGATTCCTACGAGTGGAACGCCCTCGATAAACAAATCTATATCATGGCGAAAGATAAGGACCGTGTT
CGCATGTATAGTCTAAACCCGTCCAACGGAAAGATTAAGCAACTTCAAGCCAAGGAAGATGTCATCTCCGATTACTCCAT
CGCCAATCAAGCTTTCGAAATGGTTTATTTCGGATTAAGCGCTTCCAATTCCCAAAGGCTTTATACCTATAACCTGAAAA
ACGACGCCTCTTCCTGCTTGATCGATCTCTCCAAAGAGATCTTGAGAGACGTCACTTTAGGAGAAGTGCAAGATTGGAAT
TTCGTTTCCGCCCAAGGGGATACGATTTACGGCCGCTTCTATCTCCCTCCTCATTTTGACGCAACTAAGAAATATCCGAT
GATCGTGAATTATTACGGAGGAACAACTCCTACGGCCCGGGTGATGGAAAGCCGTTATCCTTCGCATGTATACGCCGGCT
TAGGGTACATCGTCTACATCATACAGCCCAGTGGAGCGACTGGATTCGGCCAAGAGTTCTCCGCACGCCATGTCAACGCA
TGGGGTAAACTTACCGCTGACGAGATCATCGAAGGCACGAAAAAGTTCTGTGAGGAGCATCCTTTTGTCAACACGAAGAA
AATCGGTTGCATGGGGGCTTCATACGGAGGTTTCATGACTCAATACCTACAAATAAAAACAGATATATTCGCGGCGGCCA
TGTCTCATGCGGGAATCAGCGACATCACCAGCTATTGGGGAGAAGGTTACTGGGGATATTCATACAGCTCGTTGGCTAGC
GCTAACAGTTATCCATGGAATGCCCGGGATATGTACACTTTACAAAGTCCGCTGTTTAACGCAGACAAGATCAATACCCC
GATCTTGTTCTTACATGGAACCGCAGACACGAATGTTCCGATTGGAGAGAGCATCCAGATGTTTACCGCATTAAAATTAT
TGGGTAAGCCTACAGCGTTTGTCCAGGTAGAAGGAGAGAACCACCATATACTGGATTATGAGAAACGTATCTTGTGGAAT
AACACAATTTACGCATGGTTCGCTAAGTGGTTGAAAGATCAACCGGAGTGGTGGGACGCATTATATCCTCCGAAAAGCCT
ATAA

Upstream 100 bases:

>100_bases
TCGTAGATGAGATAGAAATCTTATAAGATAATGATACAGCGAGATGGCTGAGAGATACCCGCCATCTCGCTTTCTTATTT
TAAACTAAATAACAAATATC

Downstream 100 bases:

>100_bases
AAATCAAAATAGGTCACTCTATTCACATATATCTAAAGAGTATCTTTATTAGATACTCTTTTTTTATTTAAATACATTAG
ATAGTATTTATGAAACACCT

Product: putative alanyl dipeptidyl peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG
ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK
ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR
WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR
NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV
FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV
RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN
FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA
WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS
ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN
NTIYAWFAKWLKDQPEWWDALYPPKSL

Sequences:

>Translated_827_residues
MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG
ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK
ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR
WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR
NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV
FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV
RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN
FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA
WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS
ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN
NTIYAWFAKWLKDQPEWWDALYPPKSL
>Mature_827_residues
MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG
ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK
ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR
WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR
NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV
FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV
RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN
FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA
WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS
ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN
NTIYAWFAKWLKDQPEWWDALYPPKSL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI37577089, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI18450280, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI194394146, Length=267, Percent_Identity=26.2172284644195, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI16933540, Length=239, Percent_Identity=25.5230125523013, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17552908, Length=203, Percent_Identity=29.064039408867, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144537, Length=291, Percent_Identity=25.4295532646048, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25144540, Length=291, Percent_Identity=25.4295532646048, Blast_Score=71, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324793, Length=247, Percent_Identity=27.9352226720648, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45550825, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45553511, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551969, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 93508; Mature: 93508

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNT
CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
TVPFCNLSQSGQTLDAASSGELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEV
CCCCEECCCCCCEEECCCCCCEEECCCCCHHHHEEEHEEECCCCEEEEEEEECCCCEEEE
YVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALKASFNPEKDAVVTATVNPEKR
EECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCC
YTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR
EEHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCEEE
WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGP
EECCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCC
QERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFS
HHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEE
RREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSPDATQLLVDASGEAFDGI
CCCCCCCCCCCCEEEEEEECCEEEEHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
GLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV
CEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCE
RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCL
EEEEECCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHH
IDLSKEILRDVTLGEVQDWNFVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTAR
HHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHH
VMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNAWGKLTADEIIEGTKKFCEEH
HHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHC
PFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCC
ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAF
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEE
VQVEGENHHILDYEKRILWNNTIYAWFAKWLKDQPEWWDALYPPKSL
EEEECCCCEEEECCCEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNT
CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
TVPFCNLSQSGQTLDAASSGELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEV
CCCCEECCCCCCEEECCCCCCEEECCCCCHHHHEEEHEEECCCCEEEEEEEECCCCEEEE
YVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALKASFNPEKDAVVTATVNPEKR
EECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCC
YTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR
EEHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCEEE
WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGP
EECCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCC
QERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFS
HHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEE
RREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSPDATQLLVDASGEAFDGI
CCCCCCCCCCCCEEEEEEECCEEEEHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
GLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV
CEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCE
RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCL
EEEEECCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHH
IDLSKEILRDVTLGEVQDWNFVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTAR
HHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHH
VMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNAWGKLTADEIIEGTKKFCEEH
HHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHC
PFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCC
ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAF
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEE
VQVEGENHHILDYEKRILWNNTIYAWFAKWLKDQPEWWDALYPPKSL
EEEECCCCEEEECCCEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]