| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is nahA [H]
Identifier: 150009120
GI number: 150009120
Start: 2974800
End: 2977121
Strand: Direct
Name: nahA [H]
Synonym: BDI_2521
Alternate gene names: 150009120
Gene position: 2974800-2977121 (Clockwise)
Preceding gene: 150009119
Following gene: 150009121
Centisome position: 61.83
GC content: 49.87
Gene sequence:
>2322_bases ATGAACAGCCTAAGCAAACTAGCGCTCGTCCTGACATTTTGCACGGGAATGATCGCTTGCTCCGGTGGTAAGGCCGTAAA AGGAGATTACGGAGTAGTGCCTTTGCCACAAGAAGTAACATTGACGAACGGAAATCCTTTCGTCCTAAGTCCATCCACGA AGATATTTTATCCGGAGGGCAATGATAAGATGAAGAAGAACGCCGAGTTCCTCGCTTCTTATATCAAGGAAATCACGGGC TATGAATTAGCAACCGCTACCGGCCAGCCCGGTAAGGGGATCAGCCTCGTTATCGACCAAAGCATCCAGAATCCGGAAGG ATATCAACTGACCGTTAGCGATAACGGGATACGGATCGCCGGAAGCACGGATGCCGGCGTATTTTATGGTATCCAGACAT TACGTAAATCGATCCCGGCCACGGCCCAAGGGATGAACGTAGAATTACCGGCAGCTACCATCAACGACTATCCCCGTTTT GCCTATAGAGGCATGATGCTGGATGTCAGCCGCCATTTCTTCCCCGTGGATTCGGTAAAAACGTATCTCGATATCCTTGC CTTGCACAACCAAAATACGTTCCACTGGCATCTGTCCGATGACCAAGGTTGGCGTATCGAGATCAAGAAATATCCGGAAT TGACACAGATCGGATCTAAACGCAAGGAAACCGTGATCGGCCATAACTCCGGAACATATGACGGAAAGGAATACGGGGGC TTCTATACACAAGACCAGATTCGCGATGTCATCAACTATGCCGCCGAACGCCATATCACGATCATCCCGGAAATCGATAT GCCGGGACATCAATTGGCAGCCTTGGCTACTTACCCGGAACTTGGATGCACCGGAGGCCCTTATGACGTATGGGGCCAAT GGGGAGTAGCCGACGACGTGATCTGCGCCGGAAACGAGAAATCCATGCAATTCCTAGAAGACGTATTGAGCGAGGTCATC GATCTTTTCCCGTCCGAATATATCCATGTAGGTGGTGATGAGTGCCCGAAGGTACGTTGGGAGAAATGCCCGAAATGCCA AGCTCGCATCAAGGCGGAAGGTATCAAGGGGGACAAGAAACATTCCGCCGAGGAATATTTGCAAAGCTACGTGATCTCCC GCATGGAGAAATTCGTGGAGAGCAAAGGACGCCATATCATCGGCTGGGACGAGATCCTAGAAGGAGGCTTGGCCCCGAAT GCCACGGTAATGAGCTGGAGAGGCATGGATGGAGGTATCGAGGCCGCCAAGCAAAAGCATAACGTGGTCATGACACCGAA TACATATGTATATCTGGATTACTATCAATCAGCGGATACGGATCTTGAGCCCGATGCTATCGGTGGTTACTTGCCGTTAG AGAAAGTATATTCTTTTGAGCCGACAGCCGGTATCTCTCCTGAAGACCAGAAGTACGTGATCGGGGCGCAAGCCAACCTC TGGACGGAATATATCCCGACCTTCTCACAGGTAGAATACATGATCATGCCCCGTATCGACGCCGTAGCCGATATCCAGTG GAGCGATCCGTCCAAGAAAGATTATCAGACGTTCCTGCCCCGTGTGGCCCGCATGACACAACTTTACGATCGCTTGGGAT ATAATTACGGAAAGCATATCTTCGATATTAACGCCTCCCTGACCACCAATACGGAGAACGGAACACTCGACATAGCCTTG ACGAAGTTGGGTGAAGGAGATATCTATTATACGGTAGACGGTAGCGATCCTACGATCGCCAGCATCAAGTATGAAGGCCC GGTACAGATCAACCAAGATTGCGAATTCAAGGCGATCGTTGTCCGTCCGAACGGTACGAGCCGCATCTTCTCAGAAGATA TCTTCTTCAATAAAGCGACGATGAAGCCCATCACCTTGAAAGAGCAACCCAGCAAAGGATACGTTTTCAACGGGGCACAG GTATTGGTAGACGGCTTACGTGGAGGTAGTAATTACAAGACCGGCCATTGGCTGGGTTTCCAAGGAAAAGACCTTGACGC CACGATCGATCTAAAGGAACCAACCGAAATCCAGAAGGTATCTTTCAACACAAACGTGGTGAAAGGCGATTGGATCATGG GAGCCTCCGCCGTAACCGTAAAGGTATCCGACGATGGCAAGAATTTCAAGGAAGTAGCTTCCAAGAAAATCCCGGAGCTA ACCCAAAACGACAAGGACGGTTTATATCCCCAAGAGATATCCTTCGCCCCGGTAAACGCCCGCTATGTCGAGATTATCAT CAACAGCAGCAAACTACCAAAATGGCACGGTGGCGCCGGAAGTCCCGCATTCTTGTTCGTAGATGAGATAGAAATCTTAT AA
Upstream 100 bases:
>100_bases CATCAAAAGTGTAAAAGCATTAGATAAAACGGCTAATTCTTTTTATCTTTGGGCGGTGATACTGAATCAATTATTGTTTT ACGTTCTAAACTCTAAACAC
Downstream 100 bases:
>100_bases GATAATGATACAGCGAGATGGCTGAGAGATACCCGCCATCTCGCTTTCTTATTTTAAACTAAATAACAAATATCATGATA AACAAAAACATCTTAATTCT
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MNSLSKLALVLTFCTGMIACSGGKAVKGDYGVVPLPQEVTLTNGNPFVLSPSTKIFYPEGNDKMKKNAEFLASYIKEITG YELATATGQPGKGISLVIDQSIQNPEGYQLTVSDNGIRIAGSTDAGVFYGIQTLRKSIPATAQGMNVELPAATINDYPRF AYRGMMLDVSRHFFPVDSVKTYLDILALHNQNTFHWHLSDDQGWRIEIKKYPELTQIGSKRKETVIGHNSGTYDGKEYGG FYTQDQIRDVINYAAERHITIIPEIDMPGHQLAALATYPELGCTGGPYDVWGQWGVADDVICAGNEKSMQFLEDVLSEVI DLFPSEYIHVGGDECPKVRWEKCPKCQARIKAEGIKGDKKHSAEEYLQSYVISRMEKFVESKGRHIIGWDEILEGGLAPN ATVMSWRGMDGGIEAAKQKHNVVMTPNTYVYLDYYQSADTDLEPDAIGGYLPLEKVYSFEPTAGISPEDQKYVIGAQANL WTEYIPTFSQVEYMIMPRIDAVADIQWSDPSKKDYQTFLPRVARMTQLYDRLGYNYGKHIFDINASLTTNTENGTLDIAL TKLGEGDIYYTVDGSDPTIASIKYEGPVQINQDCEFKAIVVRPNGTSRIFSEDIFFNKATMKPITLKEQPSKGYVFNGAQ VLVDGLRGGSNYKTGHWLGFQGKDLDATIDLKEPTEIQKVSFNTNVVKGDWIMGASAVTVKVSDDGKNFKEVASKKIPEL TQNDKDGLYPQEISFAPVNARYVEIIINSSKLPKWHGGAGSPAFLFVDEIEIL
Sequences:
>Translated_773_residues MNSLSKLALVLTFCTGMIACSGGKAVKGDYGVVPLPQEVTLTNGNPFVLSPSTKIFYPEGNDKMKKNAEFLASYIKEITG YELATATGQPGKGISLVIDQSIQNPEGYQLTVSDNGIRIAGSTDAGVFYGIQTLRKSIPATAQGMNVELPAATINDYPRF AYRGMMLDVSRHFFPVDSVKTYLDILALHNQNTFHWHLSDDQGWRIEIKKYPELTQIGSKRKETVIGHNSGTYDGKEYGG FYTQDQIRDVINYAAERHITIIPEIDMPGHQLAALATYPELGCTGGPYDVWGQWGVADDVICAGNEKSMQFLEDVLSEVI DLFPSEYIHVGGDECPKVRWEKCPKCQARIKAEGIKGDKKHSAEEYLQSYVISRMEKFVESKGRHIIGWDEILEGGLAPN ATVMSWRGMDGGIEAAKQKHNVVMTPNTYVYLDYYQSADTDLEPDAIGGYLPLEKVYSFEPTAGISPEDQKYVIGAQANL WTEYIPTFSQVEYMIMPRIDAVADIQWSDPSKKDYQTFLPRVARMTQLYDRLGYNYGKHIFDINASLTTNTENGTLDIAL TKLGEGDIYYTVDGSDPTIASIKYEGPVQINQDCEFKAIVVRPNGTSRIFSEDIFFNKATMKPITLKEQPSKGYVFNGAQ VLVDGLRGGSNYKTGHWLGFQGKDLDATIDLKEPTEIQKVSFNTNVVKGDWIMGASAVTVKVSDDGKNFKEVASKKIPEL TQNDKDGLYPQEISFAPVNARYVEIIINSSKLPKWHGGAGSPAFLFVDEIEIL >Mature_773_residues MNSLSKLALVLTFCTGMIACSGGKAVKGDYGVVPLPQEVTLTNGNPFVLSPSTKIFYPEGNDKMKKNAEFLASYIKEITG YELATATGQPGKGISLVIDQSIQNPEGYQLTVSDNGIRIAGSTDAGVFYGIQTLRKSIPATAQGMNVELPAATINDYPRF AYRGMMLDVSRHFFPVDSVKTYLDILALHNQNTFHWHLSDDQGWRIEIKKYPELTQIGSKRKETVIGHNSGTYDGKEYGG FYTQDQIRDVINYAAERHITIIPEIDMPGHQLAALATYPELGCTGGPYDVWGQWGVADDVICAGNEKSMQFLEDVLSEVI DLFPSEYIHVGGDECPKVRWEKCPKCQARIKAEGIKGDKKHSAEEYLQSYVISRMEKFVESKGRHIIGWDEILEGGLAPN ATVMSWRGMDGGIEAAKQKHNVVMTPNTYVYLDYYQSADTDLEPDAIGGYLPLEKVYSFEPTAGISPEDQKYVIGAQANL WTEYIPTFSQVEYMIMPRIDAVADIQWSDPSKKDYQTFLPRVARMTQLYDRLGYNYGKHIFDINASLTTNTENGTLDIAL TKLGEGDIYYTVDGSDPTIASIKYEGPVQINQDCEFKAIVVRPNGTSRIFSEDIFFNKATMKPITLKEQPSKGYVFNGAQ VLVDGLRGGSNYKTGHWLGFQGKDLDATIDLKEPTEIQKVSFNTNVVKGDWIMGASAVTVKVSDDGKNFKEVASKKIPEL TQNDKDGLYPQEISFAPVNARYVEIIINSSKLPKWHGGAGSPAFLFVDEIEIL
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI189181666, Length=439, Percent_Identity=28.0182232346241, Blast_Score=165, Evalue=2e-40, Organism=Homo sapiens, GI4504373, Length=453, Percent_Identity=26.2693156732892, Blast_Score=145, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17569815, Length=441, Percent_Identity=28.3446712018141, Blast_Score=146, Evalue=5e-35, Organism=Drosophila melanogaster, GI281365639, Length=454, Percent_Identity=24.0088105726872, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24657474, Length=454, Percent_Identity=24.0088105726872, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24657468, Length=454, Percent_Identity=24.0088105726872, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI17647501, Length=454, Percent_Identity=24.0088105726872, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI45551090, Length=470, Percent_Identity=24.6808510638298, Blast_Score=116, Evalue=5e-26, Organism=Drosophila melanogaster, GI24653074, Length=470, Percent_Identity=24.6808510638298, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI17933586, Length=456, Percent_Identity=23.9035087719298, Blast_Score=100, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 85808; Mature: 85808
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLSKLALVLTFCTGMIACSGGKAVKGDYGVVPLPQEVTLTNGNPFVLSPSTKIFYPEG CCHHHHHHHHHHHHHHHEEECCCCEECCCCCCEECCCEEEEECCCEEEECCCCEEEECCC NDKMKKNAEFLASYIKEITGYELATATGQPGKGISLVIDQSIQNPEGYQLTVSDNGIRIA CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEE GSTDAGVFYGIQTLRKSIPATAQGMNVELPAATINDYPRFAYRGMMLDVSRHFFPVDSVK CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCEEEECHHCCCCHHHHH TYLDILALHNQNTFHWHLSDDQGWRIEIKKYPELTQIGSKRKETVIGHNSGTYDGKEYGG HHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCCHHHCC FYTQDQIRDVINYAAERHITIIPEIDMPGHQLAALATYPELGCTGGPYDVWGQWGVADDV CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCE ICAGNEKSMQFLEDVLSEVIDLFPSEYIHVGGDECPKVRWEKCPKCQARIKAEGIKGDKK EECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCHHHHEECCCCCCCC HSAEEYLQSYVISRMEKFVESKGRHIIGWDEILEGGLAPNATVMSWRGMDGGIEAAKQKH CCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCEEEEECCCCCCHHHHHHCC NVVMTPNTYVYLDYYQSADTDLEPDAIGGYLPLEKVYSFEPTAGISPEDQKYVIGAQANL CEEECCCEEEEEEEECCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCH WTEYIPTFSQVEYMIMPRIDAVADIQWSDPSKKDYQTFLPRVARMTQLYDRLGYNYGKHI HHHHCCCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE FDINASLTTNTENGTLDIALTKLGEGDIYYTVDGSDPTIASIKYEGPVQINQDCEFKAIV EEECCEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCEEECCCCCEEEEE VRPNGTSRIFSEDIFFNKATMKPITLKEQPSKGYVFNGAQVLVDGLRGGSNYKTGHWLGF ECCCCCCCCEEHHHEEECCCCCCEEECCCCCCCEEECCHHHEEEHHCCCCCCCCCEEECC QGKDLDATIDLKEPTEIQKVSFNTNVVKGDWIMGASAVTVKVSDDGKNFKEVASKKIPEL CCCCCCEEEECCCCCCEEEEECCCCEEECCEEECCEEEEEEECCCCCCHHHHHHHCCCCC TQNDKDGLYPQEISFAPVNARYVEIIINSSKLPKWHGGAGSPAFLFVDEIEIL CCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MNSLSKLALVLTFCTGMIACSGGKAVKGDYGVVPLPQEVTLTNGNPFVLSPSTKIFYPEG CCHHHHHHHHHHHHHHHEEECCCCEECCCCCCEECCCEEEEECCCEEEECCCCEEEECCC NDKMKKNAEFLASYIKEITGYELATATGQPGKGISLVIDQSIQNPEGYQLTVSDNGIRIA CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEE GSTDAGVFYGIQTLRKSIPATAQGMNVELPAATINDYPRFAYRGMMLDVSRHFFPVDSVK CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCEEEECHHCCCCHHHHH TYLDILALHNQNTFHWHLSDDQGWRIEIKKYPELTQIGSKRKETVIGHNSGTYDGKEYGG HHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCCHHHCC FYTQDQIRDVINYAAERHITIIPEIDMPGHQLAALATYPELGCTGGPYDVWGQWGVADDV CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCE ICAGNEKSMQFLEDVLSEVIDLFPSEYIHVGGDECPKVRWEKCPKCQARIKAEGIKGDKK EECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCHHHHEECCCCCCCC HSAEEYLQSYVISRMEKFVESKGRHIIGWDEILEGGLAPNATVMSWRGMDGGIEAAKQKH CCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCEEEEECCCCCCHHHHHHCC NVVMTPNTYVYLDYYQSADTDLEPDAIGGYLPLEKVYSFEPTAGISPEDQKYVIGAQANL CEEECCCEEEEEEEECCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCH WTEYIPTFSQVEYMIMPRIDAVADIQWSDPSKKDYQTFLPRVARMTQLYDRLGYNYGKHI HHHHCCCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE FDINASLTTNTENGTLDIALTKLGEGDIYYTVDGSDPTIASIKYEGPVQINQDCEFKAIV EEECCEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCEEECCCCCEEEEE VRPNGTSRIFSEDIFFNKATMKPITLKEQPSKGYVFNGAQVLVDGLRGGSNYKTGHWLGF ECCCCCCCCEEHHHEEECCCCCCEEECCCCCCCEEECCHHHEEEHHCCCCCCCCCEEECC QGKDLDATIDLKEPTEIQKVSFNTNVVKGDWIMGASAVTVKVSDDGKNFKEVASKKIPEL CCCCCCEEEECCCCCCEEEEECCCCEEECCEEECCEEEEEEECCCCCCHHHHHHHCCCCC TQNDKDGLYPQEISFAPVNARYVEIIINSSKLPKWHGGAGSPAFLFVDEIEIL CCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]