| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is engA
Identifier: 150009038
GI number: 150009038
Start: 2863369
End: 2864682
Strand: Reverse
Name: engA
Synonym: BDI_2434
Alternate gene names: 150009038
Gene position: 2864682-2863369 (Counterclockwise)
Preceding gene: 150009039
Following gene: 150009035
Centisome position: 59.54
GC content: 51.29
Gene sequence:
>1314_bases ATGGGAAATATAGTAGCGATAGTGGGGAGACCCAATGTAGGTAAGTCAACCCTTTTCAACCGGTTGACGGGTACCCGTCA GGCGATCGTGAACGAGGAGGCTGGTACTACCCGCGACCGTCAGTACGGCAAGGTGGAGTGGACCGGCAAGGAGTTTTCGC TGATTGACACAGGCGGATGGGTGGTTAACTCGGAGGATGTTTTCGAGGAGGAGATCAACAAGCAGGTAAAAGTGGCTATC GAGGAGGCGGACGTGATCTTGTTCGTCGTCGATGTATTGAATGGCATCACGGATCTGGACATGGAGGTGGCGCAGATCTT GCGTCGTTGCAAGCGGCCGGTGATCGTGGTGGCGAACAAGGCGGATAATTATGATCTGCATCCGGCCTCGGCGGAGTTTT ACTCGTTTGGCTTGGGAGAGCCTTTCTGCATCTCGGCCATCAATGGTTCTTATACCGGGGATTTGCTGGATAAGATCGTG GCGACGTTGCCCGAGGAGAAGGTGGAGATACTGGAGGAGGAGTTGCCCCGTATCGCGATTATAGGACGCCCGAACGCGGG AAAATCTTCTCTTATCAATGCTTTTATTGGCGAGGATCGTCATATCGTTACCGATATCGCAGGCACGACCCGTGATTCCA TCTACACGAAATATAATAAATTCGGCTTGAACTTCTATTTGGTGGATACGGCGGGTATCCGTAAGAAGGGGAAGGTGAAT GAGGACTTGGAGTATTACTCGGTGATCCGTTCGATCCGCACCATCGAGAACTCGGATGTCTGCGTGCTGATGTTGGACGC TACGAGGGGTATCGAGAGCCAGGATATGAATATCTTCTCGCTGGTGCAGAAGAATAAGAAGGGATTGGTGGTTTGTGTGA ATAAGTGGGACTTGATCGAAGATAAGAGCCAGAAGGTGATCGACTCGTATACGACCGCTATCCGCGAGCGTCTGGCTCCG TTTACCGACTTCCCGATCTTGTTTATCTCCGCTCTGACGAAACAACGTATCCTGAAGGTGCTGGAGACCGCCAAGGAGGT TTACGAGAATCGCTCCAAGCGTGTCCCTACGGCCAAGCTGAACGAGGTGATGCTTCCGATCATCGAGAATTATCCTCCCC CAGCATGGAAGGGTAAGTATATCAAGATCAAATATATCACCCAGCTCCCGGCGGGCAGCGTGCCTTCTTTCGTGTTCTTC TGTAACTTGCCGCAATGGATCAAGGACCCGTACAAACGTTTCCTTGAGAACAAGATCCGCGAGAACTGGGATTTTACCGG TACGCCGATTAATATATTTATCCGGGAAAAGTAA
Upstream 100 bases:
>100_bases AATGTTTGTCAAAGTGGAAAAAGACTGGCGTAACCGTGACAACATATTGAAGAACTTCGGTTATCAGCTGGACTAATAAT AGCATACGAAAGGAGAATTT
Downstream 100 bases:
>100_bases ATACTAGATACAAAAAAGCCGCTTCCTGTAACGGGGAGGCGGCTTTTTCTATTTAGAATAGGTCGGAATGCGTTCCGATA TCGGTGAAAAGCAAGATTAG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MGNIVAIVGRPNVGKSTLFNRLTGTRQAIVNEEAGTTRDRQYGKVEWTGKEFSLIDTGGWVVNSEDVFEEEINKQVKVAI EEADVILFVVDVLNGITDLDMEVAQILRRCKRPVIVVANKADNYDLHPASAEFYSFGLGEPFCISAINGSYTGDLLDKIV ATLPEEKVEILEEELPRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFYLVDTAGIRKKGKVN EDLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMNIFSLVQKNKKGLVVCVNKWDLIEDKSQKVIDSYTTAIRERLAP FTDFPILFISALTKQRILKVLETAKEVYENRSKRVPTAKLNEVMLPIIENYPPPAWKGKYIKIKYITQLPAGSVPSFVFF CNLPQWIKDPYKRFLENKIRENWDFTGTPINIFIREK
Sequences:
>Translated_437_residues MGNIVAIVGRPNVGKSTLFNRLTGTRQAIVNEEAGTTRDRQYGKVEWTGKEFSLIDTGGWVVNSEDVFEEEINKQVKVAI EEADVILFVVDVLNGITDLDMEVAQILRRCKRPVIVVANKADNYDLHPASAEFYSFGLGEPFCISAINGSYTGDLLDKIV ATLPEEKVEILEEELPRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFYLVDTAGIRKKGKVN EDLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMNIFSLVQKNKKGLVVCVNKWDLIEDKSQKVIDSYTTAIRERLAP FTDFPILFISALTKQRILKVLETAKEVYENRSKRVPTAKLNEVMLPIIENYPPPAWKGKYIKIKYITQLPAGSVPSFVFF CNLPQWIKDPYKRFLENKIRENWDFTGTPINIFIREK >Mature_436_residues GNIVAIVGRPNVGKSTLFNRLTGTRQAIVNEEAGTTRDRQYGKVEWTGKEFSLIDTGGWVVNSEDVFEEEINKQVKVAIE EADVILFVVDVLNGITDLDMEVAQILRRCKRPVIVVANKADNYDLHPASAEFYSFGLGEPFCISAINGSYTGDLLDKIVA TLPEEKVEILEEELPRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFYLVDTAGIRKKGKVNE DLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMNIFSLVQKNKKGLVVCVNKWDLIEDKSQKVIDSYTTAIRERLAPF TDFPILFISALTKQRILKVLETAKEVYENRSKRVPTAKLNEVMLPIIENYPPPAWKGKYIKIKYITQLPAGSVPSFVFFC NLPQWIKDPYKRFLENKIRENWDFTGTPINIFIREK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=465, Percent_Identity=39.5698924731183, Blast_Score=322, Evalue=3e-89, Organism=Escherichia coli, GI2367268, Length=117, Percent_Identity=38.4615384615385, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1788919, Length=119, Percent_Identity=37.8151260504202, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17507259, Length=125, Percent_Identity=33.6, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=209, Percent_Identity=32.0574162679426, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_PARD8 (A6LEP5)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001303781.1 - ProteinModelPortal: A6LEP5 - SMR: A6LEP5 - STRING: A6LEP5 - GeneID: 5307583 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2434 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - BioCyc: PDIS435591:BDI_2434-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49539; Mature: 49407
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNIVAIVGRPNVGKSTLFNRLTGTRQAIVNEEAGTTRDRQYGKVEWTGKEFSLIDTGGW CCCEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCE VVNSEDVFEEEINKQVKVAIEEADVILFVVDVLNGITDLDMEVAQILRRCKRPVIVVANK EECCHHHHHHHCCCEEEEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEC ADNYDLHPASAEFYSFGLGEPFCISAINGSYTGDLLDKIVATLPEEKVEILEEELPRIAI CCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEE IGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFYLVDTAGIRKKGKVN EECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCC EDLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMNIFSLVQKNKKGLVVCVNKWDLIE CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCC DKSQKVIDSYTTAIRERLAPFTDFPILFISALTKQRILKVLETAKEVYENRSKRVPTAKL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH NEVMLPIIENYPPPAWKGKYIKIKYITQLPAGSVPSFVFFCNLPQWIKDPYKRFLENKIR HHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH ENWDFTGTPINIFIREK CCCCCCCCCEEEEEECC >Mature Secondary Structure GNIVAIVGRPNVGKSTLFNRLTGTRQAIVNEEAGTTRDRQYGKVEWTGKEFSLIDTGGW CCEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCE VVNSEDVFEEEINKQVKVAIEEADVILFVVDVLNGITDLDMEVAQILRRCKRPVIVVANK EECCHHHHHHHCCCEEEEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEC ADNYDLHPASAEFYSFGLGEPFCISAINGSYTGDLLDKIVATLPEEKVEILEEELPRIAI CCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEE IGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFYLVDTAGIRKKGKVN EECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCC EDLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMNIFSLVQKNKKGLVVCVNKWDLIE CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCC DKSQKVIDSYTTAIRERLAPFTDFPILFISALTKQRILKVLETAKEVYENRSKRVPTAKL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH NEVMLPIIENYPPPAWKGKYIKIKYITQLPAGSVPSFVFFCNLPQWIKDPYKRFLENKIR HHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH ENWDFTGTPINIFIREK CCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA