| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009027
Identifier: 150009027
GI number: 150009027
Start: 2848042
End: 2850471
Strand: Reverse
Name: 150009027
Synonym: BDI_2423
Alternate gene names: NA
Gene position: 2850471-2848042 (Counterclockwise)
Preceding gene: 150009028
Following gene: 150009019
Centisome position: 59.24
GC content: 48.02
Gene sequence:
>2430_bases ATGAAAGGACTTTATTTGATTTTGTTATCGTTCCTTTTCGGTTGTAATTTGCCGGATATGCAGACCGGGAAGGAGGTCTC ATATTATTTTGATCAACCAGCGCAGATATGGGAAGAAACTTTGCCTTTGGGAAACGGCCGTATCGGTATGATGCCGGATG GTGGTATTGAGCGGGAGAATGTTGTCCTGAATGAGATCTCCCTGTGGTCCGGAAGTAAGCAAGATACGGACAATCCTTAT GCGTATTATTCTTTGGCGAATATTCGTCGCCTTTTATTTGAGGGACGGAATGACGAGGCACAGGATTTGATGTATAAAAC TTTCGTCTGCAAAGGGACCGGAAGTAATCTGGGTGACGGTGCGAACGCTCCGTATGGGAGTTACCAATTATTCGGAAATC TAGTGCTGAAATATACGTATCCGAATGAATCGGATTCTATCGCTGAGTATCGCAGGCGGTTGAACCTAAGCGAGGCTATC GCTTCCGTCTCTTTTAAAAGGGGGAATGTGAATTATCAACGGGAAATGTTTACCTCTTTTTCCGGGGATCTGGGAGTGAT TCATTTGGTAGCGGATACGGATCGGGCTTTGAATTTCTCATTGGGTATGAATCGTCCGGAACATGCGACGATCTCTTTGG ACGGAAAGGACTTGCTGATGCGGGGACAACTGCCGGACGGGGTGGATACGTTGGAGATGAAAGGGATGCGTTTCGCCTCT CGTGTCCGTATCGTCTTGCCGAAGGGAGGAGATTTGGCTACGACAGATAGCTGTCTGTCGGTGCGAAGTGCCTCGGAAGC GATTATCTTGGTAAGTTTAGGTACGGATTATTTCGATAAAGACGGCGCCGGACAATCCTTGGAAAAATACTTATCGCAAG CGGAATCTAAGGATTTCTCCACCTTGCGCCGGGAACATACACTTGCTTATCGCTCCCTGTTCGATCGGGTTTCTCTGGAT TTGGGAAGAGGCGAAAGGGATCATCTTCCGATCAATGAGCGTTTGGCCGCTTTCGCTCAAGATAAGAACGATCCGGGATT GGCGGCTTTATATTTCCAGTTCGGTCGATATTTATTGATTTCCTCGACCCGGCAGGGATTACTGCCCCCGAATTTGCAAG GCTTGTGGTGTAATACGATTCATACGCCTTGGAACGGGGATTATCACCTAAATATTAATTTACAGATGAATCATTGGCCA GCGGAGGTCACGAACCTCTCCGAGTTGCACCTTCCGCTGATCGAATGGACGAAACTGCAAGTCCCTAGCGGCGAACGCAC GGCCAAGGCTTTTTATAACGCACGGGGATGGGTTACCCATATTTTAGGTAATGTTTGGGAGTTTACCGCCCCGGGCGAAC ATCCATCGTGGGGAGCGACGAATACATCCGCCGCATGGCTATGCGAGCATTTGTATACGCATTATCAGTATACATTAGAT AAGGCGTATTTGAGGGATGTTTATCCGACGATGAAAGGGGCTGCCCTATTCTTTGTGGATATGTTGGTGCAAGATCCCCG AACTAAATATCTAGTGACGGCACCTACGACCTCTCCGGAAAACGCTTATAAAATGCCAAACGAAAGTGTCGTGAGTATTT GTGCCGGATCGACGATGGATAATCAGATCTTGCGGGAATTGTTTACGAATACCATTGAGGCCGCCGGAATTTTAGGTGTG GATAGCACGTTCGCTGCTGAGTTGGCGGCGAAGCGAGATCGCTTGATGCCTACGACGATCGGTAAAGACGGCCGTATTAT GGAATGGCTCGAGCCGTATGAGGAGGTAGAGCCTACCCATCGTCATGTCTCTCATTTATATGGGCTTTATCCCGGGAATG AGATATCGATAGAGCATACGCCAGAGTTGGCTGAGGCGGCTCGTAAATCCTTGGAGGTCCGTGGTGATCAAAGCACGGGC TGGTCGATGGCTTGGAAGATTAATTTCTGGGCTCGTTTACAGGATGGCGATCATGCTTATAAATTGTTGGGTGATTTGTT ACGTCCTTGCGTAGATGAGCATACGAAGGAGGTGAAGGGAGGAGGTTCTTATCCTAATTTGTTTTGTGCCCATCCTCCTT TCCAAATCGATGGTAATTTTGGAGGCACGGCGGGTATCGCGGAGATGCTGATACAGAGTCAAACCGGATTGATCGAGTTT TTGCCGGCTTTGCCTTCCGCTTGGAAAAACGGAAGCTTTAGCGGTTTGAAAGTCCGGAATGGCGGAGAGGTGTCGGCTAA ATGGACGGAAGGTCTGCTGACGGAAGCTCGATTGAAAGCGATCGTTCCGGGTATTTTCCGGATCAAGCTTCCGGCAAATT CAGCGAACCTAAGTCTCAAGAAAAATCAGAAACCAGTATCTTTACCCGTAATCGATGGAATGCTAACGGTGGATTTGCAA CAAGGAGACGAATTGATATTAATAATGTGA
Upstream 100 bases:
>100_bases GATATGCAAAGCTTTTAGGGTGATACTGTAACCCGGGTTGCAGTGGATCGCCTCTTCGGCTTTTGATGGAAAAACAATAA CAAGGAATAATCGTATGAAT
Downstream 100 bases:
>100_bases ATAATATGCCAATATGCCAATGTGCCCTGCGAATATATCCATTTAATTGGCATATTGGCACATTACCCACATTGGCACAT TATTCAATATAGTGGTAATC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Trehalose And Maltose Hydrolase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Fibronectin Type III Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein; 1 2-A-L-Fucosidase
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MKGLYLILLSFLFGCNLPDMQTGKEVSYYFDQPAQIWEETLPLGNGRIGMMPDGGIERENVVLNEISLWSGSKQDTDNPY AYYSLANIRRLLFEGRNDEAQDLMYKTFVCKGTGSNLGDGANAPYGSYQLFGNLVLKYTYPNESDSIAEYRRRLNLSEAI ASVSFKRGNVNYQREMFTSFSGDLGVIHLVADTDRALNFSLGMNRPEHATISLDGKDLLMRGQLPDGVDTLEMKGMRFAS RVRIVLPKGGDLATTDSCLSVRSASEAIILVSLGTDYFDKDGAGQSLEKYLSQAESKDFSTLRREHTLAYRSLFDRVSLD LGRGERDHLPINERLAAFAQDKNDPGLAALYFQFGRYLLISSTRQGLLPPNLQGLWCNTIHTPWNGDYHLNINLQMNHWP AEVTNLSELHLPLIEWTKLQVPSGERTAKAFYNARGWVTHILGNVWEFTAPGEHPSWGATNTSAAWLCEHLYTHYQYTLD KAYLRDVYPTMKGAALFFVDMLVQDPRTKYLVTAPTTSPENAYKMPNESVVSICAGSTMDNQILRELFTNTIEAAGILGV DSTFAAELAAKRDRLMPTTIGKDGRIMEWLEPYEEVEPTHRHVSHLYGLYPGNEISIEHTPELAEAARKSLEVRGDQSTG WSMAWKINFWARLQDGDHAYKLLGDLLRPCVDEHTKEVKGGGSYPNLFCAHPPFQIDGNFGGTAGIAEMLIQSQTGLIEF LPALPSAWKNGSFSGLKVRNGGEVSAKWTEGLLTEARLKAIVPGIFRIKLPANSANLSLKKNQKPVSLPVIDGMLTVDLQ QGDELILIM
Sequences:
>Translated_809_residues MKGLYLILLSFLFGCNLPDMQTGKEVSYYFDQPAQIWEETLPLGNGRIGMMPDGGIERENVVLNEISLWSGSKQDTDNPY AYYSLANIRRLLFEGRNDEAQDLMYKTFVCKGTGSNLGDGANAPYGSYQLFGNLVLKYTYPNESDSIAEYRRRLNLSEAI ASVSFKRGNVNYQREMFTSFSGDLGVIHLVADTDRALNFSLGMNRPEHATISLDGKDLLMRGQLPDGVDTLEMKGMRFAS RVRIVLPKGGDLATTDSCLSVRSASEAIILVSLGTDYFDKDGAGQSLEKYLSQAESKDFSTLRREHTLAYRSLFDRVSLD LGRGERDHLPINERLAAFAQDKNDPGLAALYFQFGRYLLISSTRQGLLPPNLQGLWCNTIHTPWNGDYHLNINLQMNHWP AEVTNLSELHLPLIEWTKLQVPSGERTAKAFYNARGWVTHILGNVWEFTAPGEHPSWGATNTSAAWLCEHLYTHYQYTLD KAYLRDVYPTMKGAALFFVDMLVQDPRTKYLVTAPTTSPENAYKMPNESVVSICAGSTMDNQILRELFTNTIEAAGILGV DSTFAAELAAKRDRLMPTTIGKDGRIMEWLEPYEEVEPTHRHVSHLYGLYPGNEISIEHTPELAEAARKSLEVRGDQSTG WSMAWKINFWARLQDGDHAYKLLGDLLRPCVDEHTKEVKGGGSYPNLFCAHPPFQIDGNFGGTAGIAEMLIQSQTGLIEF LPALPSAWKNGSFSGLKVRNGGEVSAKWTEGLLTEARLKAIVPGIFRIKLPANSANLSLKKNQKPVSLPVIDGMLTVDLQ QGDELILIM >Mature_809_residues MKGLYLILLSFLFGCNLPDMQTGKEVSYYFDQPAQIWEETLPLGNGRIGMMPDGGIERENVVLNEISLWSGSKQDTDNPY AYYSLANIRRLLFEGRNDEAQDLMYKTFVCKGTGSNLGDGANAPYGSYQLFGNLVLKYTYPNESDSIAEYRRRLNLSEAI ASVSFKRGNVNYQREMFTSFSGDLGVIHLVADTDRALNFSLGMNRPEHATISLDGKDLLMRGQLPDGVDTLEMKGMRFAS RVRIVLPKGGDLATTDSCLSVRSASEAIILVSLGTDYFDKDGAGQSLEKYLSQAESKDFSTLRREHTLAYRSLFDRVSLD LGRGERDHLPINERLAAFAQDKNDPGLAALYFQFGRYLLISSTRQGLLPPNLQGLWCNTIHTPWNGDYHLNINLQMNHWP AEVTNLSELHLPLIEWTKLQVPSGERTAKAFYNARGWVTHILGNVWEFTAPGEHPSWGATNTSAAWLCEHLYTHYQYTLD KAYLRDVYPTMKGAALFFVDMLVQDPRTKYLVTAPTTSPENAYKMPNESVVSICAGSTMDNQILRELFTNTIEAAGILGV DSTFAAELAAKRDRLMPTTIGKDGRIMEWLEPYEEVEPTHRHVSHLYGLYPGNEISIEHTPELAEAARKSLEVRGDQSTG WSMAWKINFWARLQDGDHAYKLLGDLLRPCVDEHTKEVKGGGSYPNLFCAHPPFQIDGNFGGTAGIAEMLIQSQTGLIEF LPALPSAWKNGSFSGLKVRNGGEVSAKWTEGLLTEARLKAIVPGIFRIKLPANSANLSLKKNQKPVSLPVIDGMLTVDLQ QGDELILIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90237; Mature: 90237
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLYLILLSFLFGCNLPDMQTGKEVSYYFDQPAQIWEETLPLGNGRIGMMPDGGIEREN CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCC VVLNEISLWSGSKQDTDNPYAYYSLANIRRLLFEGRNDEAQDLMYKTFVCKGTGSNLGDG EEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCC ANAPYGSYQLFGNLVLKYTYPNESDSIAEYRRRLNLSEAIASVSFKRGNVNYQREMFTSF CCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHC SGDLGVIHLVADTDRALNFSLGMNRPEHATISLDGKDLLMRGQLPDGVDTLEMKGMRFAS CCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCHHHHCCCEEEC RVRIVLPKGGDLATTDSCLSVRSASEAIILVSLGTDYFDKDGAGQSLEKYLSQAESKDFS EEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHH TLRREHTLAYRSLFDRVSLDLGRGERDHLPINERLAAFAQDKNDPGLAALYFQFGRYLLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEEE SSTRQGLLPPNLQGLWCNTIHTPWNGDYHLNINLQMNHWPAEVTNLSELHLPLIEWTKLQ ECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCHHHCCHHHHCCCHHHEEEEE VPSGERTAKAFYNARGWVTHILGNVWEFTAPGEHPSWGATNTSAAWLCEHLYTHYQYTLD CCCCCHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAYLRDVYPTMKGAALFFVDMLVQDPRTKYLVTAPTTSPENAYKMPNESVVSICAGSTMD HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCHH NQILRELFTNTIEAAGILGVDSTFAAELAAKRDRLMPTTIGKDGRIMEWLEPYEEVEPTH HHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHCCHHH RHVSHLYGLYPGNEISIEHTPELAEAARKSLEVRGDQSTGWSMAWKINFWARLQDGDHAY HHHHHHHHCCCCCEEEEECCHHHHHHHHHHEEECCCCCCCCEEEEEEEEEEEECCCCHHH KLLGDLLRPCVDEHTKEVKGGGSYPNLFCAHPPFQIDGNFGGTAGIAEMLIQSQTGLIEF HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHH LPALPSAWKNGSFSGLKVRNGGEVSAKWTEGLLTEARLKAIVPGIFRIKLPANSANLSLK HHHCCHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE KNQKPVSLPVIDGMLTVDLQQGDELILIM CCCCCCCCEEECCEEEEEECCCCCEEEEC >Mature Secondary Structure MKGLYLILLSFLFGCNLPDMQTGKEVSYYFDQPAQIWEETLPLGNGRIGMMPDGGIEREN CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCC VVLNEISLWSGSKQDTDNPYAYYSLANIRRLLFEGRNDEAQDLMYKTFVCKGTGSNLGDG EEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCC ANAPYGSYQLFGNLVLKYTYPNESDSIAEYRRRLNLSEAIASVSFKRGNVNYQREMFTSF CCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHC SGDLGVIHLVADTDRALNFSLGMNRPEHATISLDGKDLLMRGQLPDGVDTLEMKGMRFAS CCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCHHHHCCCEEEC RVRIVLPKGGDLATTDSCLSVRSASEAIILVSLGTDYFDKDGAGQSLEKYLSQAESKDFS EEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHH TLRREHTLAYRSLFDRVSLDLGRGERDHLPINERLAAFAQDKNDPGLAALYFQFGRYLLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEEE SSTRQGLLPPNLQGLWCNTIHTPWNGDYHLNINLQMNHWPAEVTNLSELHLPLIEWTKLQ ECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCHHHCCHHHHCCCHHHEEEEE VPSGERTAKAFYNARGWVTHILGNVWEFTAPGEHPSWGATNTSAAWLCEHLYTHYQYTLD CCCCCHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAYLRDVYPTMKGAALFFVDMLVQDPRTKYLVTAPTTSPENAYKMPNESVVSICAGSTMD HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCHH NQILRELFTNTIEAAGILGVDSTFAAELAAKRDRLMPTTIGKDGRIMEWLEPYEEVEPTH HHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHCCHHH RHVSHLYGLYPGNEISIEHTPELAEAARKSLEVRGDQSTGWSMAWKINFWARLQDGDHAY HHHHHHHHCCCCCEEEEECCHHHHHHHHHHEEECCCCCCCCEEEEEEEEEEEECCCCHHH KLLGDLLRPCVDEHTKEVKGGGSYPNLFCAHPPFQIDGNFGGTAGIAEMLIQSQTGLIEF HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHH LPALPSAWKNGSFSGLKVRNGGEVSAKWTEGLLTEARLKAIVPGIFRIKLPANSANLSLK HHHCCHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE KNQKPVSLPVIDGMLTVDLQQGDELILIM CCCCCCCCEEECCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA