| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009017
Identifier: 150009017
GI number: 150009017
Start: 2835964
End: 2837550
Strand: Direct
Name: 150009017
Synonym: BDI_2413
Alternate gene names: NA
Gene position: 2835964-2837550 (Clockwise)
Preceding gene: 150009016
Following gene: 150009018
Centisome position: 58.94
GC content: 46.57
Gene sequence:
>1587_bases ATGAAAACGATATTCAATATAGCCATAAGCATCGCTTTAGGATGTAGTTGTGCCTCCTGTAGTGATTTCTTGAATCTTAC GCCGTATAGCGAGATCACCGCCGAGAACTTCTACCAGAACGAGGAGGATTTCAGGCAAGCCGTAAATGGAGCTTACGAAC CTTTACGGAACATGTACAACACGGAAGAGTGGAATCTGGGAGAGGCCAAATCGGATAATACGACGTATATCATCCATATC GCCAAATCATCCTTAGACGGAGAAGATCCGGATCAGTTCCTTGAGACATCCACCAATGGTAATGTCGGTACGAAGTATAA TAACTGCTACGTAATCATCGGACGATGTAACCGGATTATCTCAGAAATAGACCAAGCGGATTTTGACGCAGAAGCAAAAA GCAACCTCAAAGGACAAGCTTTGTTCCTTCGGGCATTCTGCTATTTCAACCTAGTACAATACTTTGGCGGCGTACCTCTG CATACGACACCCTCTACCGTGTATGAGGAGGCATTTAAACCCCGTGCGAGCGTAGACGAAGTATATGAGCAAATCATGAA AGACGCACAAGAAGCCAGTGATCTCCTACCTGTAAAATCAAGGCAAGAGGTAGGAAGAGTTTCCAAAGGCTCCGCACAGA CCTTATTGGGAAACGTATACATGGTACTAAAACGATGGGCGGAAGCAGAACAAACGCTGAAAGAGGTGGTATCCTCAGGC GAGTATGAGTTATTAGCGGATTACGGCTCCATCTATTCCATCTCGAACAAGAACCATAAGGAATCTATCTTCGAGATCCA ATACATGCAAGACGCCTCATTAGGACAACAAAGTGATTTCATATACAGATTCTTGCCCTATATGACGAATCCGTCTGCCA TCACGGGAACAACCCCTAATCCTTGTCCTTCCAACGTAGACCATGGTGGGTTTAACACCCCTACGATCGATCTAATCAAC GCATACGAAAAGGGAGACAAACGGTTGGACGCATCCATCGGTATGGTGGAAGGTAAGCTCACCGATAGCTACGCCCTCGA CGCTACCGGCGTGAAAAGTATAGTTGACTATGAGCCAGCTCCGGGAATAACCGCTTATCCTTTTATCAAAAAATATTTTC ATGAGCATATAAAGCCCTATTACACGGATGACAACTGGCCGGTCTACAGGTACGCAGAGGTATTGCTCTTTCTGGCGGAA GCTATCAACGAGCAGAATAGGCCGGACGAGGCTATCCATTATCTGAATGACACCTTCGGGCAAGCAAGTATCCGGGGAAG GGCGGGATTAGCTCCTGTCAAATCCCAGAATGTAGATGCGTTGAGAGAGGCTATCTACCAAGAGAGACGGATCGAGCTGG CATTCGAGAACAAACGCTGGACAGACCTTCTGAGAACGGGACGAGCCGTGGAAGTCATGACACGACATGGACAAAAGATA AAGGCAAATCCCGAATCTTATTATTGGCCCGACGGTGTTCAACCCGTGGCGAACGCTTATCTGTTCAACCCAGATAAATG CTTGTTGCCCATACCTCTGCGAGAAATCGACTTGAACAGCGAGCTTAAACAAAATCCCGGATATTAA
Upstream 100 bases:
>100_bases TAGCTTGCAACAAGGATTCGATTATACCACCTATCCCGTTCCACGGACCATTACGTTGGGTTTAAATGTTAACTTCTAAC TATCTAATTATACGAAATAT
Downstream 100 bases:
>100_bases CGAAGTTATTCTTATATTCGCATCATGAAAAGAGCACATATGAAAATCCTGCTAAGTTTACTATGCTGTGTCGGTGTATT CACCCTATCAGCACAAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; RagB/SusD Family Protein; Lipoprotein; Liporotein
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MKTIFNIAISIALGCSCASCSDFLNLTPYSEITAENFYQNEEDFRQAVNGAYEPLRNMYNTEEWNLGEAKSDNTTYIIHI AKSSLDGEDPDQFLETSTNGNVGTKYNNCYVIIGRCNRIISEIDQADFDAEAKSNLKGQALFLRAFCYFNLVQYFGGVPL HTTPSTVYEEAFKPRASVDEVYEQIMKDAQEASDLLPVKSRQEVGRVSKGSAQTLLGNVYMVLKRWAEAEQTLKEVVSSG EYELLADYGSIYSISNKNHKESIFEIQYMQDASLGQQSDFIYRFLPYMTNPSAITGTTPNPCPSNVDHGGFNTPTIDLIN AYEKGDKRLDASIGMVEGKLTDSYALDATGVKSIVDYEPAPGITAYPFIKKYFHEHIKPYYTDDNWPVYRYAEVLLFLAE AINEQNRPDEAIHYLNDTFGQASIRGRAGLAPVKSQNVDALREAIYQERRIELAFENKRWTDLLRTGRAVEVMTRHGQKI KANPESYYWPDGVQPVANAYLFNPDKCLLPIPLREIDLNSELKQNPGY
Sequences:
>Translated_528_residues MKTIFNIAISIALGCSCASCSDFLNLTPYSEITAENFYQNEEDFRQAVNGAYEPLRNMYNTEEWNLGEAKSDNTTYIIHI AKSSLDGEDPDQFLETSTNGNVGTKYNNCYVIIGRCNRIISEIDQADFDAEAKSNLKGQALFLRAFCYFNLVQYFGGVPL HTTPSTVYEEAFKPRASVDEVYEQIMKDAQEASDLLPVKSRQEVGRVSKGSAQTLLGNVYMVLKRWAEAEQTLKEVVSSG EYELLADYGSIYSISNKNHKESIFEIQYMQDASLGQQSDFIYRFLPYMTNPSAITGTTPNPCPSNVDHGGFNTPTIDLIN AYEKGDKRLDASIGMVEGKLTDSYALDATGVKSIVDYEPAPGITAYPFIKKYFHEHIKPYYTDDNWPVYRYAEVLLFLAE AINEQNRPDEAIHYLNDTFGQASIRGRAGLAPVKSQNVDALREAIYQERRIELAFENKRWTDLLRTGRAVEVMTRHGQKI KANPESYYWPDGVQPVANAYLFNPDKCLLPIPLREIDLNSELKQNPGY >Mature_528_residues MKTIFNIAISIALGCSCASCSDFLNLTPYSEITAENFYQNEEDFRQAVNGAYEPLRNMYNTEEWNLGEAKSDNTTYIIHI AKSSLDGEDPDQFLETSTNGNVGTKYNNCYVIIGRCNRIISEIDQADFDAEAKSNLKGQALFLRAFCYFNLVQYFGGVPL HTTPSTVYEEAFKPRASVDEVYEQIMKDAQEASDLLPVKSRQEVGRVSKGSAQTLLGNVYMVLKRWAEAEQTLKEVVSSG EYELLADYGSIYSISNKNHKESIFEIQYMQDASLGQQSDFIYRFLPYMTNPSAITGTTPNPCPSNVDHGGFNTPTIDLIN AYEKGDKRLDASIGMVEGKLTDSYALDATGVKSIVDYEPAPGITAYPFIKKYFHEHIKPYYTDDNWPVYRYAEVLLFLAE AINEQNRPDEAIHYLNDTFGQASIRGRAGLAPVKSQNVDALREAIYQERRIELAFENKRWTDLLRTGRAVEVMTRHGQKI KANPESYYWPDGVQPVANAYLFNPDKCLLPIPLREIDLNSELKQNPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59639; Mature: 59639
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIFNIAISIALGCSCASCSDFLNLTPYSEITAENFYQNEEDFRQAVNGAYEPLRNMYN CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TEEWNLGEAKSDNTTYIIHIAKSSLDGEDPDQFLETSTNGNVGTKYNNCYVIIGRCNRII CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCEECCEEEEEECHHHHH SEIDQADFDAEAKSNLKGQALFLRAFCYFNLVQYFGGVPLHTTPSTVYEEAFKPRASVDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHH VYEQIMKDAQEASDLLPVKSRQEVGRVSKGSAQTLLGNVYMVLKRWAEAEQTLKEVVSSG HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EYELLADYGSIYSISNKNHKESIFEIQYMQDASLGQQSDFIYRFLPYMTNPSAITGTTPN CEEEEECCCCEEEECCCCCHHHHEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCEECCCCC PCPSNVDHGGFNTPTIDLINAYEKGDKRLDASIGMVEGKLTDSYALDATGVKSIVDYEPA CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEECCCCCCCEECCHHHHHHHCCCCC PGITAYPFIKKYFHEHIKPYYTDDNWPVYRYAEVLLFLAEAINEQNRPDEAIHYLNDTFG CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC QASIRGRAGLAPVKSQNVDALREAIYQERRIELAFENKRWTDLLRTGRAVEVMTRHGQKI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHCCCEE KANPESYYWPDGVQPVANAYLFNPDKCLLPIPLREIDLNSELKQNPGY ECCCCCCCCCCCCCHHHHCEEECCCCEEEECCHHHCCCCCHHHCCCCC >Mature Secondary Structure MKTIFNIAISIALGCSCASCSDFLNLTPYSEITAENFYQNEEDFRQAVNGAYEPLRNMYN CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TEEWNLGEAKSDNTTYIIHIAKSSLDGEDPDQFLETSTNGNVGTKYNNCYVIIGRCNRII CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCEECCEEEEEECHHHHH SEIDQADFDAEAKSNLKGQALFLRAFCYFNLVQYFGGVPLHTTPSTVYEEAFKPRASVDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHH VYEQIMKDAQEASDLLPVKSRQEVGRVSKGSAQTLLGNVYMVLKRWAEAEQTLKEVVSSG HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EYELLADYGSIYSISNKNHKESIFEIQYMQDASLGQQSDFIYRFLPYMTNPSAITGTTPN CEEEEECCCCEEEECCCCCHHHHEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCEECCCCC PCPSNVDHGGFNTPTIDLINAYEKGDKRLDASIGMVEGKLTDSYALDATGVKSIVDYEPA CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEECCCCCCCEECCHHHHHHHCCCCC PGITAYPFIKKYFHEHIKPYYTDDNWPVYRYAEVLLFLAEAINEQNRPDEAIHYLNDTFG CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC QASIRGRAGLAPVKSQNVDALREAIYQERRIELAFENKRWTDLLRTGRAVEVMTRHGQKI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHCCCEE KANPESYYWPDGVQPVANAYLFNPDKCLLPIPLREIDLNSELKQNPGY ECCCCCCCCCCCCCHHHHCEEECCCCEEEECCHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA