| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009018
Identifier: 150009018
GI number: 150009018
Start: 2837575
End: 2839218
Strand: Direct
Name: 150009018
Synonym: BDI_2414
Alternate gene names: NA
Gene position: 2837575-2839218 (Clockwise)
Preceding gene: 150009017
Following gene: 150009020
Centisome position: 58.98
GC content: 49.21
Gene sequence:
>1644_bases ATGAAAAGAGCACATATGAAAATCCTGCTAAGTTTACTATGCTGTGTCGGTGTATTCACCCTATCAGCACAAAGTCGTTA TTTCAAAGAAAGCGCTTCATGGCTTCAAAAGAGTGAGGCCTGCAAGCCAGTGTTAACCTATACGGAACATAAGCCGGTCA AACGGGTCACTTCCATCAAAGATGCGTCAGCCTACCAAGGTTGGCGCATGCGGGACGAAGGAAGCACGGATCTGTTATTC AATGAGTCCCTGAAGAAACATCCATCGGTTATAGTTGACTTCGGTGAGCATCTGACGGGGTATTTGGATTTCTCGCTCAA GCTCCTTAGCCAACAGGTTTCGGACGCTCCGGTACGTATCAAATTCACGTTCGCCGAAGTTCCCTCGGAATTGAACACGC CTTTCGACCCTTATCCGGGCGGTCTGTCAAGGGCTTGGCTACAAGATGAGGTGATGACGTTAATGACCGTACCCATCGAG GCCTCCATCCCCAGAAGGGTGTCTTTTCGGTATCTCAAGATAGAGTTGCTAGGCGCTTCCAGTTTCGATTTCGCCTTCGA CAAGCTAACGTTCCGTGCGCAGACATCGGCTAAGACGGCTCCATTGCCACTGGCTTCCACGACCGATCCCTTGATCCGTA AAATCAATGAGGTAGGATTGCTTACATTAAAAGAATGTATGCAGACCGTCTATGAGGATGGCCCGAAACGGGATCGCCGG TTATGGATCGGAGACTTGTATCTGGAGGCGCTAGCGAACGCATGGTCGTATAAAAACCACGACTTGACGAAACGTTGCCT CTATTTATTAGCGGCTCTAGCCAATGATGAAGGACTGCTGCACGCCACCGTATTGGAGACACCGACCCCTCATCCGCAAA ACGGTACGCATTGCTTGGACTATTCCCTGCTGTATAACGTAGCGTTGCTGGAATACCTGAAAGAGACCGGAGACAAGGAG GTCGCCTTGGACTTATGGCCGGTAGTGGTCCGCCAAATAGAGATGGCCTTGCGTCAATACTCGGACGATTGGATCTACGA TATGCAAAAGAAGCCGATTTATTGGTTGGTATTCGACTGGAAAGATAATTATGATCGCCAAGCATCCATGCAGGGACTTA CGGCATTCTCATTAGAGAAAAGCTATGAGCTGGCTAAAATGCTGGGAAAAGAGAAGGAGGCTGGAGACTGGCCTCGTATC GCCGGCCAGATAAAGAAAGCCGCCCGGAAAACATTCTATGACCAAAAGAACGGGGTGATCGTAAGCGGCCCTAACCGTCA GGTGTCTTACCTATCACAAGTGTGGATGATCCTATCGGAGACGCTTACCGCCAAGGAAGGAGCAAAAGCGATGGCCACCG TCCTATCGATGCCCGACGCATGCTATCCGGGATGTCCGTACGCTTATCATTATGTAATGGAAGCCTTGTTGAAATGTGGA ATGCGGCAAGAGGCCCGTTCGCTCTTAACCAGTTATTGGGGCGGCATGGTGAATAAAGGAGCCGATACATTCTGGGAGGT ATATGATCCGAACAATGACGAATTATCACCTTACGGATTTTTCCCGATCAATAGTTATTGCCACGCATGGAGTTGCACGC CGGTTTATTTCATCAACAAATACCCGGAGATATTCCAAAGATAG
Upstream 100 bases:
>100_bases AGATAAATGCTTGTTGCCCATACCTCTGCGAGAAATCGACTTGAACAGCGAGCTTAAACAAAATCCCGGATATTAACGAA GTTATTCTTATATTCGCATC
Downstream 100 bases:
>100_bases AAGATAATAAGAGAAACGCCAATATCGCTCGAAATGGAACGTATTGGCGTTTTCTTTTTCTTATTCCTCCACAGGTTCCC CGAACAGGGTTGCCGAGGAA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Alfa-L-Rhamnosidase In L-Rhamnose Subsystem; Ricin B Lectin
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKRAHMKILLSLLCCVGVFTLSAQSRYFKESASWLQKSEACKPVLTYTEHKPVKRVTSIKDASAYQGWRMRDEGSTDLLF NESLKKHPSVIVDFGEHLTGYLDFSLKLLSQQVSDAPVRIKFTFAEVPSELNTPFDPYPGGLSRAWLQDEVMTLMTVPIE ASIPRRVSFRYLKIELLGASSFDFAFDKLTFRAQTSAKTAPLPLASTTDPLIRKINEVGLLTLKECMQTVYEDGPKRDRR LWIGDLYLEALANAWSYKNHDLTKRCLYLLAALANDEGLLHATVLETPTPHPQNGTHCLDYSLLYNVALLEYLKETGDKE VALDLWPVVVRQIEMALRQYSDDWIYDMQKKPIYWLVFDWKDNYDRQASMQGLTAFSLEKSYELAKMLGKEKEAGDWPRI AGQIKKAARKTFYDQKNGVIVSGPNRQVSYLSQVWMILSETLTAKEGAKAMATVLSMPDACYPGCPYAYHYVMEALLKCG MRQEARSLLTSYWGGMVNKGADTFWEVYDPNNDELSPYGFFPINSYCHAWSCTPVYFINKYPEIFQR
Sequences:
>Translated_547_residues MKRAHMKILLSLLCCVGVFTLSAQSRYFKESASWLQKSEACKPVLTYTEHKPVKRVTSIKDASAYQGWRMRDEGSTDLLF NESLKKHPSVIVDFGEHLTGYLDFSLKLLSQQVSDAPVRIKFTFAEVPSELNTPFDPYPGGLSRAWLQDEVMTLMTVPIE ASIPRRVSFRYLKIELLGASSFDFAFDKLTFRAQTSAKTAPLPLASTTDPLIRKINEVGLLTLKECMQTVYEDGPKRDRR LWIGDLYLEALANAWSYKNHDLTKRCLYLLAALANDEGLLHATVLETPTPHPQNGTHCLDYSLLYNVALLEYLKETGDKE VALDLWPVVVRQIEMALRQYSDDWIYDMQKKPIYWLVFDWKDNYDRQASMQGLTAFSLEKSYELAKMLGKEKEAGDWPRI AGQIKKAARKTFYDQKNGVIVSGPNRQVSYLSQVWMILSETLTAKEGAKAMATVLSMPDACYPGCPYAYHYVMEALLKCG MRQEARSLLTSYWGGMVNKGADTFWEVYDPNNDELSPYGFFPINSYCHAWSCTPVYFINKYPEIFQR >Mature_547_residues MKRAHMKILLSLLCCVGVFTLSAQSRYFKESASWLQKSEACKPVLTYTEHKPVKRVTSIKDASAYQGWRMRDEGSTDLLF NESLKKHPSVIVDFGEHLTGYLDFSLKLLSQQVSDAPVRIKFTFAEVPSELNTPFDPYPGGLSRAWLQDEVMTLMTVPIE ASIPRRVSFRYLKIELLGASSFDFAFDKLTFRAQTSAKTAPLPLASTTDPLIRKINEVGLLTLKECMQTVYEDGPKRDRR LWIGDLYLEALANAWSYKNHDLTKRCLYLLAALANDEGLLHATVLETPTPHPQNGTHCLDYSLLYNVALLEYLKETGDKE VALDLWPVVVRQIEMALRQYSDDWIYDMQKKPIYWLVFDWKDNYDRQASMQGLTAFSLEKSYELAKMLGKEKEAGDWPRI AGQIKKAARKTFYDQKNGVIVSGPNRQVSYLSQVWMILSETLTAKEGAKAMATVLSMPDACYPGCPYAYHYVMEALLKCG MRQEARSLLTSYWGGMVNKGADTFWEVYDPNNDELSPYGFFPINSYCHAWSCTPVYFINKYPEIFQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62514; Mature: 62514
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAHMKILLSLLCCVGVFTLSAQSRYFKESASWLQKSEACKPVLTYTEHKPVKRVTSIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHCC DASAYQGWRMRDEGSTDLLFNESLKKHPSVIVDFGEHLTGYLDFSLKLLSQQVSDAPVRI CHHHCCCCEECCCCCCCEEECCHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEE KFTFAEVPSELNTPFDPYPGGLSRAWLQDEVMTLMTVPIEASIPRRVSFRYLKIELLGAS EEEHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCC SFDFAFDKLTFRAQTSAKTAPLPLASTTDPLIRKINEVGLLTLKECMQTVYEDGPKRDRR CCCHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LWIGDLYLEALANAWSYKNHDLTKRCLYLLAALANDEGLLHATVLETPTPHPQNGTHCLD EEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEHH YSLLYNVALLEYLKETGDKEVALDLWPVVVRQIEMALRQYSDDWIYDMQKKPIYWLVFDW HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEC KDNYDRQASMQGLTAFSLEKSYELAKMLGKEKEAGDWPRIAGQIKKAARKTFYDQKNGVI CCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE VSGPNRQVSYLSQVWMILSETLTAKEGAKAMATVLSMPDACYPGCPYAYHYVMEALLKCG EECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC MRQEARSLLTSYWGGMVNKGADTFWEVYDPNNDELSPYGFFPINSYCHAWSCTPVYFINK CHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEECC YPEIFQR CHHHHCC >Mature Secondary Structure MKRAHMKILLSLLCCVGVFTLSAQSRYFKESASWLQKSEACKPVLTYTEHKPVKRVTSIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHCC DASAYQGWRMRDEGSTDLLFNESLKKHPSVIVDFGEHLTGYLDFSLKLLSQQVSDAPVRI CHHHCCCCEECCCCCCCEEECCHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEE KFTFAEVPSELNTPFDPYPGGLSRAWLQDEVMTLMTVPIEASIPRRVSFRYLKIELLGAS EEEHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCC SFDFAFDKLTFRAQTSAKTAPLPLASTTDPLIRKINEVGLLTLKECMQTVYEDGPKRDRR CCCHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LWIGDLYLEALANAWSYKNHDLTKRCLYLLAALANDEGLLHATVLETPTPHPQNGTHCLD EEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEHH YSLLYNVALLEYLKETGDKEVALDLWPVVVRQIEMALRQYSDDWIYDMQKKPIYWLVFDW HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEC KDNYDRQASMQGLTAFSLEKSYELAKMLGKEKEAGDWPRIAGQIKKAARKTFYDQKNGVI CCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE VSGPNRQVSYLSQVWMILSETLTAKEGAKAMATVLSMPDACYPGCPYAYHYVMEALLKCG EECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC MRQEARSLLTSYWGGMVNKGADTFWEVYDPNNDELSPYGFFPINSYCHAWSCTPVYFINK CHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEECC YPEIFQR CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA