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The map label for this gene is yrbE [C]

Identifier: 150009005

GI number: 150009005

Start: 2814122

End: 2814868

Strand: Direct

Name: yrbE [C]

Synonym: BDI_2401

Alternate gene names: 150009005

Gene position: 2814122-2814868 (Clockwise)

Preceding gene: 150009002

Following gene: 150009006

Centisome position: 58.49

GC content: 43.37

Gene sequence:

>747_bases
ATGAATAAAGCATTACACAGAATGGGTGAGTATACCCTACTGATGATGAAGAGTATAACACTTCCAGACCGGTGGAGTAT
GTTCTTTAAGCAATTGATCAAAGAGATATACAAGCTAGGCGTGGACTCTCTTTGGATTGTCATAATCATCTCGGTCTTTA
TCGGTACGGTTATCGCCATCCAGATCTCCTTGAATATCAGTTCCCCCTTGATTCCTAAGTTTACGATCGGCTATACCACC
CGTGAGATTATCTTGCTGGAATTCTCTTCCTCTATCATGGCACTAATCCTAGCGGGTAAAGTAGGCAGTAATATCGCCTC
CGAGATCGGAACCATGCGAGTCACCGAGCAGATAGACGCCATGGAAATCATGGGTGTTAATTCAGCCAACTTCCTGATCC
TTCCGAAAATGCTCGGTTTGATGATCTTTATTCCGGTATTGGTTATCTTCAGTATGTTCACCGGTATCATGGGCGGCATA
TTCGCCAGTTACTCAACGAGTACGGGAATGACTCCTTCCTCGTTCGAGTACGGTTTGCAATTCTACTTCAACGAGTTTTA
CATTTGGTATTCTATTATCAAATCCGTAGTATATGCGTTCATCATCTCATCCATCGCCGCCTATTTTGGCTATAACGTAA
AGGGAGGCGCCCTAGAGGTAGGTAAGGCAAGTACGAATGCCGTGGTCATGAGCAGTATCATGATTTTACTTGCCGACGTA
ATATTAACCCATTTAATGCTTACTTAA

Upstream 100 bases:

>100_bases
TTTACAAATAAAACCAATCTTGTTTCTAAGATGTTATATGGTTATTAGTGGATTTTACGCTATCTTTGCAAATTGAAATC
AGAAATTTATCAAGATAAAA

Downstream 100 bases:

>100_bases
AAATGATCGAAGTTAAGAATATAACGAAGTCTTTCGATGGACGTGTCGTCTTGAAAGATATAAGTACGACGTTCGAGGAT
GGTAAGACGAATCTGATCAT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNKALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT
REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGI
FASYSTSTGMTPSSFEYGLQFYFNEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADV
ILTHLMLT

Sequences:

>Translated_248_residues
MNKALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT
REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGI
FASYSTSTGMTPSSFEYGLQFYFNEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADV
ILTHLMLT
>Mature_248_residues
MNKALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT
REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGI
FASYSTSTGMTPSSFEYGLQFYFNEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADV
ILTHLMLT

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=245, Percent_Identity=29.3877551020408, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27501; Mature: 27501

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHE
QISLNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDA
EEEEECCCCCCCCEEECCCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MEIMGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQ
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
FYFNEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
ILTHLMLT
HHHHHHCC
>Mature Secondary Structure
MNKALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHE
QISLNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDA
EEEEECCCCCCCCEEECCCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MEIMGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQ
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
FYFNEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
ILTHLMLT
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA