| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009002
Identifier: 150009002
GI number: 150009002
Start: 2811112
End: 2811999
Strand: Direct
Name: 150009002
Synonym: BDI_2398
Alternate gene names: NA
Gene position: 2811112-2811999 (Clockwise)
Preceding gene: 150008990
Following gene: 150009005
Centisome position: 58.43
GC content: 46.4
Gene sequence:
>888_bases ATGAGAATAAAAGGAATATATGCTACCCGTCCGGCGATAATCCAACTTTTGATCCTCTTGCTATTCTTATTGGCTGGAGC CATTTTATCATCTATTATATCCACGGGCTTATTACTTGCGACCCACGGTTTACAGGCTGATATAACCCAAGACGCTAATT TAATGAGGCTCATTCAGTTCATCTCGGCGATCTGTACCTTTTTGCTACCATCTATCGCCATGGCTTGGATATGTAGTGAC AATCCCTGCCATTATCTATCAGTCAAGAAAATCACAGACGGCAGGATCTGGATTCTCACCTTAGTTTGCGTGTTCTTATT TTCTCCGGTTATCAATTTGCTAGGATTGCTCAACAAACAGATGGAGTTACCCGCGTTTATGGCTCCTATCGAGGAATGGA TGCGGGCGCAAGAAACCCTCGCCGAACAACTGACGACGATCCTGTTATCCAGCGATAGCGTTTGGGTAATCCTGGCCAAC CTTATCGTTATCGCCGTTACGGCCGGGATAACCGAGGAGTTCCTGTTCAGAGGAGCCTTGCAACGAGTGATCGGGAAATG GACCTCCAACCCTCATACGATCATATGGGTCGCCGCCATACTATTTAGCGCCTTCCATTTACAATTTTACGGATTCTTGC CCCGGATGATACTCGGAGCCTATTTCGGCTATCTACTCTATTGGAGCAAGAGCATCTGGATACCGGTGTTCGCCCACTTT GTCAATAATGCTTTCGCCGTAATAGGGATGTCGGACAGTCGTCTCAAGGATAACGAGTTTATCACAGGCGATATTCCCGC CGAGCATCTTTTGGACTTTTGTCTTATCGCCGCCTTATCTTTCCTGCTGTTCATACTGGTAAACAGGCGATTGAAACGAC TGCTATAA
Upstream 100 bases:
>100_bases CGCAAAATTAGACTTATTCTTTTAATCGTGCAAATTTTGATCTGTTTTTATTCTTTTGTTTATATTTGGCGGCAATTATT TACCCTTTGAATGAATCATT
Downstream 100 bases:
>100_bases GTCTTTCTTACGCAGCACAAAGTCTTTTCCCAAATATTTCTCGCGCACGATCTCGTTCTCGGCTAGTTGTTCGGCGGTTC CTTGGAAAAGGACTTTTCCC
Product: putative metal-dependent membrane protease
Products: NA
Alternate protein names: Metal-Dependent Membrane Protease; Protease
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL
Sequences:
>Translated_295_residues MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL >Mature_295_residues MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33174; Mature: 33174
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ISAICTFLLPSIAMAWICSDNPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQ HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILANLIVIAVTAGITEEFLFRGAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL HCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ISAICTFLLPSIAMAWICSDNPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQ HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILANLIVIAVTAGITEEFLFRGAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL HCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA