Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009002

Identifier: 150009002

GI number: 150009002

Start: 2811112

End: 2811999

Strand: Direct

Name: 150009002

Synonym: BDI_2398

Alternate gene names: NA

Gene position: 2811112-2811999 (Clockwise)

Preceding gene: 150008990

Following gene: 150009005

Centisome position: 58.43

GC content: 46.4

Gene sequence:

>888_bases
ATGAGAATAAAAGGAATATATGCTACCCGTCCGGCGATAATCCAACTTTTGATCCTCTTGCTATTCTTATTGGCTGGAGC
CATTTTATCATCTATTATATCCACGGGCTTATTACTTGCGACCCACGGTTTACAGGCTGATATAACCCAAGACGCTAATT
TAATGAGGCTCATTCAGTTCATCTCGGCGATCTGTACCTTTTTGCTACCATCTATCGCCATGGCTTGGATATGTAGTGAC
AATCCCTGCCATTATCTATCAGTCAAGAAAATCACAGACGGCAGGATCTGGATTCTCACCTTAGTTTGCGTGTTCTTATT
TTCTCCGGTTATCAATTTGCTAGGATTGCTCAACAAACAGATGGAGTTACCCGCGTTTATGGCTCCTATCGAGGAATGGA
TGCGGGCGCAAGAAACCCTCGCCGAACAACTGACGACGATCCTGTTATCCAGCGATAGCGTTTGGGTAATCCTGGCCAAC
CTTATCGTTATCGCCGTTACGGCCGGGATAACCGAGGAGTTCCTGTTCAGAGGAGCCTTGCAACGAGTGATCGGGAAATG
GACCTCCAACCCTCATACGATCATATGGGTCGCCGCCATACTATTTAGCGCCTTCCATTTACAATTTTACGGATTCTTGC
CCCGGATGATACTCGGAGCCTATTTCGGCTATCTACTCTATTGGAGCAAGAGCATCTGGATACCGGTGTTCGCCCACTTT
GTCAATAATGCTTTCGCCGTAATAGGGATGTCGGACAGTCGTCTCAAGGATAACGAGTTTATCACAGGCGATATTCCCGC
CGAGCATCTTTTGGACTTTTGTCTTATCGCCGCCTTATCTTTCCTGCTGTTCATACTGGTAAACAGGCGATTGAAACGAC
TGCTATAA

Upstream 100 bases:

>100_bases
CGCAAAATTAGACTTATTCTTTTAATCGTGCAAATTTTGATCTGTTTTTATTCTTTTGTTTATATTTGGCGGCAATTATT
TACCCTTTGAATGAATCATT

Downstream 100 bases:

>100_bases
GTCTTTCTTACGCAGCACAAAGTCTTTTCCCAAATATTTCTCGCGCACGATCTCGTTCTCGGCTAGTTGTTCGGCGGTTC
CTTGGAAAAGGACTTTTCCC

Product: putative metal-dependent membrane protease

Products: NA

Alternate protein names: Metal-Dependent Membrane Protease; Protease

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD
NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN
LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF
VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL

Sequences:

>Translated_295_residues
MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD
NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN
LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF
VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL
>Mature_295_residues
MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQFISAICTFLLPSIAMAWICSD
NPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQMELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILAN
LIVIAVTAGITEEFLFRGALQRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF
VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33174; Mature: 33174

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ISAICTFLLPSIAMAWICSDNPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILANLIVIAVTAGITEEFLFRGAL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL
HCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIKGIYATRPAIIQLLILLLFLLAGAILSSIISTGLLLATHGLQADITQDANLMRLIQF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ISAICTFLLPSIAMAWICSDNPCHYLSVKKITDGRIWILTLVCVFLFSPVINLLGLLNKQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MELPAFMAPIEEWMRAQETLAEQLTTILLSSDSVWVILANLIVIAVTAGITEEFLFRGAL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVIGKWTSNPHTIIWVAAILFSAFHLQFYGFLPRMILGAYFGYLLYWSKSIWIPVFAHF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNNAFAVIGMSDSRLKDNEFITGDIPAEHLLDFCLIAALSFLLFILVNRRLKRLL
HCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA