| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008919
Identifier: 150008919
GI number: 150008919
Start: 2718464
End: 2720023
Strand: Reverse
Name: 150008919
Synonym: BDI_2315
Alternate gene names: NA
Gene position: 2720023-2718464 (Counterclockwise)
Preceding gene: 150008920
Following gene: 150008918
Centisome position: 56.53
GC content: 43.14
Gene sequence:
>1560_bases ATGAAACGTTTAATAATATATTGTTTGTCGTTTTTGTTATTGATCTCTTTTGGTGGTTGTATGGAGAATTATCTGGATTT GTATCCGGAGGATAAAATCACGGCCGCTAACTTTCCGGAAAAAGAATCGGATATTAAGTTACTGTTAGATGGAACGTATG CTTGTCTAAGGGAGACCGCTGTCATAGATCAAGGTTTGTTTGGGTTTGGAATGACAGATTGTGCGACTCCCAATGCATAT AATTGGGGAACTGTCGAGGTTTTCAATAAATTGGGAGCCGGACGTTTGAGCTCTAGTGATGGCGGTGTCGTTACTTTTCG TTGGAAAAGATGTTATGAAATGATCTCTAGGGCTAATTATTTATTGGCTTGTTTAGAAAAAATAGAATTAGCGGGGGAGG CGAAAAAGTTGTATGTTGGCGAGGCTCATTTCTTGAGGGGATTGGCTTATTCGGTACTTGCGGAAACTTATGGGGGTGTT CCTGTCGTACTTTCAGAAATCTCAACATCGGAGGCTCGTAACCTAAAGCGTTCCAGTCGAGAAGATACATGGCAACAGGC GTTGGATGATTATGATGTCGCCATCGCTAATTTAGGTGCGGATGCTCCGGAGAAAGGACGTGCTACGAAAGGCGCTGCCT TGGGTATGAAAATGCGTGCGTATTTATATCAAGGTAAGTATAAGGCGGTTTTGGAATGTGTAGATCAGATTGATGCTCTG AAGAAATATGGCTTGTTTCATAGTTATGCGACATTGTTCGATCCGGCTAATGAAGGAAATAAGGAGGTTCTATTTGATAT CCAATATATAGAGGGTGAAAATTCACAGGGTACTTTTCTGGATCAATACTGCGGAACGGGAACCGGTAGTTGGACACGTG GTAGTCGCTATGTTCCTACAGATGATTTGGTGGCGGCTTATGAGACCGTGGATGGGAGCCCTATTGATCCGGAAAATCCT TATGAGAACCGTGATCCTCGTTTAGCGTTCACGGTTGTGCTTCCGGGCTCTTATATTTTAGGACATCGTTTCCCTAGTTA TTTGTATCCGGGGGGAGCTTTTAATCATGCGGGTAATCGATTGAAACATTTGAGTACTCGTAAGTACCGGATTCAGAACG AGGCGGATTTACCTCCCGCCGGCCAGTCTTATATTAACGATATTATCTTGCGATATGCGGATGTGCTATTGTCGAAAGCG GAAGCGATTATTGAATCTGGTGGAAATGTTTCGGAGGCGATCGCTATATTAAACCGGATCCGTACGGAACGAGATGACGT GAAAATTTCCCCATTGCCTTTGTCCTTATCTCGGGATGAGGCCCGTGAGAAACTAAGGCATGAAAGAAGAATAGAATTGG CGTTGGAAGGTCGTTACTGGTCGGATGTGAAGCGTTGGAAAATAGGAAAGGAGCTTTATCCGATGATTATAAAGGATCAT GAAGGAAGCGTGATTGAGACAAAATTCCCGAACGGCTATTTGGAATACTATGATTTATTACCTATTCCTGATAGTGAGCG CTCTTTGAATCCAAATTTAGAGCAAAATCCGGGTTGGTGA
Upstream 100 bases:
>100_bases GAGGGATACGATCCGGAAAGAAATACGTTTGATGCGGGAGGTTCTCCGTATCCGACACCGAGAATATTCACATTTGGTTT AAATCTTAATTTCTAAAGCT
Downstream 100 bases:
>100_bases TTTAGAGAATATATTTATTAGAATTTAGATTATATAAAATGAATTATAAAGAGATCTTTGTTGCGGTTAATAGTGCCGCA TTGATGTTGTCAACCGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; RagB/SusD Family Protein; Lipoprotein; Liporotein
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MKRLIIYCLSFLLLISFGGCMENYLDLYPEDKITAANFPEKESDIKLLLDGTYACLRETAVIDQGLFGFGMTDCATPNAY NWGTVEVFNKLGAGRLSSSDGGVVTFRWKRCYEMISRANYLLACLEKIELAGEAKKLYVGEAHFLRGLAYSVLAETYGGV PVVLSEISTSEARNLKRSSREDTWQQALDDYDVAIANLGADAPEKGRATKGAALGMKMRAYLYQGKYKAVLECVDQIDAL KKYGLFHSYATLFDPANEGNKEVLFDIQYIEGENSQGTFLDQYCGTGTGSWTRGSRYVPTDDLVAAYETVDGSPIDPENP YENRDPRLAFTVVLPGSYILGHRFPSYLYPGGAFNHAGNRLKHLSTRKYRIQNEADLPPAGQSYINDIILRYADVLLSKA EAIIESGGNVSEAIAILNRIRTERDDVKISPLPLSLSRDEAREKLRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLEQNPGW
Sequences:
>Translated_519_residues MKRLIIYCLSFLLLISFGGCMENYLDLYPEDKITAANFPEKESDIKLLLDGTYACLRETAVIDQGLFGFGMTDCATPNAY NWGTVEVFNKLGAGRLSSSDGGVVTFRWKRCYEMISRANYLLACLEKIELAGEAKKLYVGEAHFLRGLAYSVLAETYGGV PVVLSEISTSEARNLKRSSREDTWQQALDDYDVAIANLGADAPEKGRATKGAALGMKMRAYLYQGKYKAVLECVDQIDAL KKYGLFHSYATLFDPANEGNKEVLFDIQYIEGENSQGTFLDQYCGTGTGSWTRGSRYVPTDDLVAAYETVDGSPIDPENP YENRDPRLAFTVVLPGSYILGHRFPSYLYPGGAFNHAGNRLKHLSTRKYRIQNEADLPPAGQSYINDIILRYADVLLSKA EAIIESGGNVSEAIAILNRIRTERDDVKISPLPLSLSRDEAREKLRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLEQNPGW >Mature_519_residues MKRLIIYCLSFLLLISFGGCMENYLDLYPEDKITAANFPEKESDIKLLLDGTYACLRETAVIDQGLFGFGMTDCATPNAY NWGTVEVFNKLGAGRLSSSDGGVVTFRWKRCYEMISRANYLLACLEKIELAGEAKKLYVGEAHFLRGLAYSVLAETYGGV PVVLSEISTSEARNLKRSSREDTWQQALDDYDVAIANLGADAPEKGRATKGAALGMKMRAYLYQGKYKAVLECVDQIDAL KKYGLFHSYATLFDPANEGNKEVLFDIQYIEGENSQGTFLDQYCGTGTGSWTRGSRYVPTDDLVAAYETVDGSPIDPENP YENRDPRLAFTVVLPGSYILGHRFPSYLYPGGAFNHAGNRLKHLSTRKYRIQNEADLPPAGQSYINDIILRYADVLLSKA EAIIESGGNVSEAIAILNRIRTERDDVKISPLPLSLSRDEAREKLRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLEQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58301; Mature: 58301
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIIYCLSFLLLISFGGCMENYLDLYPEDKITAANFPEKESDIKLLLDGTYACLRETA CHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHH VIDQGLFGFGMTDCATPNAYNWGTVEVFNKLGAGRLSSSDGGVVTFRWKRCYEMISRANY HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LLACLEKIELAGEAKKLYVGEAHFLRGLAYSVLAETYGGVPVVLSEISTSEARNLKRSSR HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH EDTWQQALDDYDVAIANLGADAPEKGRATKGAALGMKMRAYLYQGKYKAVLECVDQIDAL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KKYGLFHSYATLFDPANEGNKEVLFDIQYIEGENSQGTFLDQYCGTGTGSWTRGSRYVPT HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCC DDLVAAYETVDGSPIDPENPYENRDPRLAFTVVLPGSYILGHRFPSYLYPGGAFNHAGNR HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCHHHCHH LKHLSTRKYRIQNEADLPPAGQSYINDIILRYADVLLSKAEAIIESGGNVSEAIAILNRI HHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RTERDDVKISPLPLSLSRDEAREKLRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH HCCCCCCEECCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCHHHCCEEEECC EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLEQNPGW CCCEEEEECCCCCEEHEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLIIYCLSFLLLISFGGCMENYLDLYPEDKITAANFPEKESDIKLLLDGTYACLRETA CHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHH VIDQGLFGFGMTDCATPNAYNWGTVEVFNKLGAGRLSSSDGGVVTFRWKRCYEMISRANY HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LLACLEKIELAGEAKKLYVGEAHFLRGLAYSVLAETYGGVPVVLSEISTSEARNLKRSSR HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH EDTWQQALDDYDVAIANLGADAPEKGRATKGAALGMKMRAYLYQGKYKAVLECVDQIDAL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KKYGLFHSYATLFDPANEGNKEVLFDIQYIEGENSQGTFLDQYCGTGTGSWTRGSRYVPT HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCC DDLVAAYETVDGSPIDPENPYENRDPRLAFTVVLPGSYILGHRFPSYLYPGGAFNHAGNR HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCHHHCHH LKHLSTRKYRIQNEADLPPAGQSYINDIILRYADVLLSKAEAIIESGGNVSEAIAILNRI HHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RTERDDVKISPLPLSLSRDEAREKLRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH HCCCCCCEECCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCHHHCCEEEECC EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLEQNPGW CCCEEEEECCCCCEEHEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA