| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008872
Identifier: 150008872
GI number: 150008872
Start: 2653598
End: 2654461
Strand: Reverse
Name: 150008872
Synonym: BDI_2262
Alternate gene names: NA
Gene position: 2654461-2653598 (Counterclockwise)
Preceding gene: 150008873
Following gene: 150008871
Centisome position: 55.17
GC content: 42.71
Gene sequence:
>864_bases ATGAAGAGAATTTTACTTTGTTTAATGGTGGCTTTATTTGCCACTGGTTGCTTATTCGCTAAAAACAACGATGAGAAAAT GAATGTAATGTCTTATAACATCCGTTACGATAATTCGGGTGATAAGGATAATCAATGGAAATTCAGAAGAGATTTCGCTG CTGATTTAGTGAAATTCTATGAGGCGGATGTGTTCGGTGCGCAAGAGGTCTTGAATAATCAGCTGAATGATTTGCTTAAT CGTTTACCGGAATACGCTTATGTGGGTGTTGGTCGTGAGGATGGCAAGACGAAAGGGGAGTACGCTCCGATTTTCTATCG TAAGGATCGTTTCTCCGTTGAGAAAAGCGGTAATTTCTGGTTAGCCGAAGATATAAATGCCATTGGTAAGAAAGGTTGGG ACGCCGCATGCGAGCGCGTAGCTACTTGGGCGATCTTGAAAGATAAGAATACGGGAAAGAAATTCTTCTTCTTGAATACG CACTTGGATCATATGGGGAAAGTGGCTCGTCATGAAGGAGCTTCATTGGTGCTGGAGCAAGCGAAGAAATTATCCGAGAA TTTGCCTATAATCGTGACTGGCGATTTCAATGCCGTGCCTTCTGATGAGCCGATACAAGTATTGACTAATCCGAGTGATC CTCGTCATTTGACTCATTCCCGCACGATCGCAGGGTTTATTTACGGCCCGGAATGGACATTCCATGATTTTGGAAAGATC CCTTACGACAAGCGTGAATGGATTGATTATATCTTCGTGAAAGGGAATATCAAGGTATTGCGTCATGGTGTATTGACTGA AACGTTGAATAACCTGTTCCCATCCGACCATTGCCCGGTAATCAGTACGTTGATACTCGAATAA
Upstream 100 bases:
>100_bases TCCTTATTTGCTTAATAAATGGATAAACTTTATTTTTGCGAGGTAACAAAGACCATAGATAAATACTGAGACATATAAGA AACATATAATAATCAATATC
Downstream 100 bases:
>100_bases AAAAGCTTTGTGTGTATGGGGAAAGTAGACGTATTGAAGGAAACTACCCCGCTTTCATCAGAAGATTGCTTCTTGGTCAT GCAACGCCCGAAATCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase; Secreted Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLN RLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNT HLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFIYGPEWTFHDFGKI PYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFPSDHCPVISTLILE
Sequences:
>Translated_287_residues MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLN RLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNT HLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFIYGPEWTFHDFGKI PYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFPSDHCPVISTLILE >Mature_287_residues MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLN RLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNT HLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFIYGPEWTFHDFGKI PYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFPSDHCPVISTLILE
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32861; Mature: 32861
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFY CHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH EADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFW HHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEECCCCEE LAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQ EHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHH AKKLSENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFIYGPEWTFHDFGKI HHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHCCCCEEEEEEECCCCCHHCCCCC PYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFPSDHCPVISTLILE CCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC >Mature Secondary Structure MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFY CHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH EADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFW HHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEECCCCEE LAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQ EHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHH AKKLSENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFIYGPEWTFHDFGKI HHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHCCCCEEEEEEECCCCCHHCCCCC PYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFPSDHCPVISTLILE CCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA