| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008651
Identifier: 150008651
GI number: 150008651
Start: 2404132
End: 2404941
Strand: Direct
Name: 150008651
Synonym: BDI_2039
Alternate gene names: NA
Gene position: 2404132-2404941 (Clockwise)
Preceding gene: 150008650
Following gene: 150008652
Centisome position: 49.97
GC content: 46.3
Gene sequence:
>810_bases ATGTATCACGAATTTACCCCCTGCGCAGCCTTAGTGCCCTTTATCGACAAGTTCTGGGTGTTCAAAGGCTTTACCGACAT CGGGACACGTTTTAAGATCCTCGCGGACGGATGCACCGACTTTATCTTCTCAATCGGTAACATGACCGTCCCTACGGACG AGCATTCGATGATCATGCAGCCTTATCGTTCCTTTTTTGTCGGTCCCATGAGGTCTTATTCCAATCTTACCGCTACGACA GATTCCCTACATATGCTAGGAGTTCGTTTCCAACCCTGTGGGCTGGCAGCTTTCACGAATGAGCCTTTGGGACAGTTTGC CGATCTTCGCATCCAGTCTTCAGATATTAACCTTTTATTCGATAATTCCTTTGCCGAGATGCTTTGCGAACAACCGGACG ATTCCGTCCGTATCCGCATTATCGAAGGCTATCTTATACGCCTTCTCACCCAATCCATTCAAGTAGACAGACAAATTATA TACGCCACCTCATTTATAAAACAGTCCTACGGACAGCTACCCGTACAAAACTTGATCGACAAGATTTGCATCTGCCAGCG ACATTTCCAACGTAAGTTCAAGGATGCCACCGGATATACCCCCAAAGAATTCAGCCGGATCATAAAATTCCAATATGCCA TAGAAGTACTGAGGAACGCCCCACACACGGACTTAAGCAGCATCGCCTTAGATTGCGGCTACTATGACCATTCCCACTTT ATCAAAGAATTCAAGCGTTTAGCGGGAGACGTTCCCTCTTACTTCCTGACTTTACCAAATCCTGCGGATGAACCGCTTAC TTATATTTGA
Upstream 100 bases:
>100_bases ATAGTTATGATTTGTTCAACTCATAACTATGTTTTGAAAATTTCATAACTATGATTTTTTAATAGTATCTTCGCCGTATA AAACAAGCGAAAGAAGCACT
Downstream 100 bases:
>100_bases TTAAAAATAAAATCGCAAGAATCTATCACATAAAAAGTCGTTTTTTTACAACCAGAAAGAATAGTCATTCCGTATGTTTG CACTATTGAACTTTTACAAA
Product: transcriptional regulator
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-TurN-Helix Arac Domain; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Arac Family; Helix-Turn-Helix AraC Domain Protein; Transcription Regulator; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Arac/Xyls Family Transcriptional Regulator; AraC Family Transcription Regulator; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MYHEFTPCAALVPFIDKFWVFKGFTDIGTRFKILADGCTDFIFSIGNMTVPTDEHSMIMQPYRSFFVGPMRSYSNLTATT DSLHMLGVRFQPCGLAAFTNEPLGQFADLRIQSSDINLLFDNSFAEMLCEQPDDSVRIRIIEGYLIRLLTQSIQVDRQII YATSFIKQSYGQLPVQNLIDKICICQRHFQRKFKDATGYTPKEFSRIIKFQYAIEVLRNAPHTDLSSIALDCGYYDHSHF IKEFKRLAGDVPSYFLTLPNPADEPLTYI
Sequences:
>Translated_269_residues MYHEFTPCAALVPFIDKFWVFKGFTDIGTRFKILADGCTDFIFSIGNMTVPTDEHSMIMQPYRSFFVGPMRSYSNLTATT DSLHMLGVRFQPCGLAAFTNEPLGQFADLRIQSSDINLLFDNSFAEMLCEQPDDSVRIRIIEGYLIRLLTQSIQVDRQII YATSFIKQSYGQLPVQNLIDKICICQRHFQRKFKDATGYTPKEFSRIIKFQYAIEVLRNAPHTDLSSIALDCGYYDHSHF IKEFKRLAGDVPSYFLTLPNPADEPLTYI >Mature_269_residues MYHEFTPCAALVPFIDKFWVFKGFTDIGTRFKILADGCTDFIFSIGNMTVPTDEHSMIMQPYRSFFVGPMRSYSNLTATT DSLHMLGVRFQPCGLAAFTNEPLGQFADLRIQSSDINLLFDNSFAEMLCEQPDDSVRIRIIEGYLIRLLTQSIQVDRQII YATSFIKQSYGQLPVQNLIDKICICQRHFQRKFKDATGYTPKEFSRIIKFQYAIEVLRNAPHTDLSSIALDCGYYDHSHF IKEFKRLAGDVPSYFLTLPNPADEPLTYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30903; Mature: 30903
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHEFTPCAALVPFIDKFWVFKGFTDIGTRFKILADGCTDFIFSIGNMTVPTDEHSMIMQ CCCCCCHHHHHHHHHHHHHHHHCHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH PYRSFFVGPMRSYSNLTATTDSLHMLGVRFQPCGLAAFTNEPLGQFADLRIQSSDINLLF HHHHHHCCHHHHCCCCCCCCCCHHEEEEEECCCCEEHCCCCCHHHHHHCEEECCCCEEEE DNSFAEMLCEQPDDSVRIRIIEGYLIRLLTQSIQVDRQIIYATSFIKQSYGQLPVQNLID CCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KICICQRHFQRKFKDATGYTPKEFSRIIKFQYAIEVLRNAPHTDLSSIALDCGYYDHSHF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH IKEFKRLAGDVPSYFLTLPNPADEPLTYI HHHHHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MYHEFTPCAALVPFIDKFWVFKGFTDIGTRFKILADGCTDFIFSIGNMTVPTDEHSMIMQ CCCCCCHHHHHHHHHHHHHHHHCHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH PYRSFFVGPMRSYSNLTATTDSLHMLGVRFQPCGLAAFTNEPLGQFADLRIQSSDINLLF HHHHHHCCHHHHCCCCCCCCCCHHEEEEEECCCCEEHCCCCCHHHHHHCEEECCCCEEEE DNSFAEMLCEQPDDSVRIRIIEGYLIRLLTQSIQVDRQIIYATSFIKQSYGQLPVQNLID CCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KICICQRHFQRKFKDATGYTPKEFSRIIKFQYAIEVLRNAPHTDLSSIALDCGYYDHSHF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH IKEFKRLAGDVPSYFLTLPNPADEPLTYI HHHHHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA