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The map label for this gene is ybaZ [H]

Identifier: 150008648

GI number: 150008648

Start: 2401922

End: 2402233

Strand: Direct

Name: ybaZ [H]

Synonym: BDI_2036

Alternate gene names: 150008648

Gene position: 2401922-2402233 (Clockwise)

Preceding gene: 150008647

Following gene: 150008650

Centisome position: 49.92

GC content: 48.08

Gene sequence:

>312_bases
ATGAAGGCTGATTTTTACACGGAAGTTTACAACATCGTAAAGGAAATACCGGAGGGAAATGTGGTTACCTACGGGCAGTT
AGCCAAACTCGCCCGGAGGCCACAATGTTCCCGCATGGTAGGGCAAGCCATGTTCAACGCCCCGAGAGAGCTGAACTTGC
CTTGCCACAGGGTAGTAAACAGCCAAGGAAGATTGGCTCCCAATTGGACGGAACAAAGGGAACTGCTGGAAAAAGAAGGC
ATCGCTTTCAAAAAGAACGGGTGCGTGGATTTAAAGAAGCATATTTGGGCGGAGATATTGCCCATTATTTAA

Upstream 100 bases:

>100_bases
AGTTTCACGATCCCGATGTCTCGCTTCAAGGAGATGTGCGAGACGATGCGTATTTGTAGCCTCGATACGCACGCATGGGG
CAAGATAAAAGCGAGAATCG

Downstream 100 bases:

>100_bases
GATACGTCACGCCATCACAAAGCTCATTATCCCCAAAAAGCATATCAACGCCATTATCAATATAGATAACAAGGTGATTA
TTCTCCTGTGAGCATATTTT

Product: putative methylated-DNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKADFYTEVYNIVKEIPEGNVVTYGQLAKLARRPQCSRMVGQAMFNAPRELNLPCHRVVNSQGRLAPNWTEQRELLEKEG
IAFKKNGCVDLKKHIWAEILPII

Sequences:

>Translated_103_residues
MKADFYTEVYNIVKEIPEGNVVTYGQLAKLARRPQCSRMVGQAMFNAPRELNLPCHRVVNSQGRLAPNWTEQRELLEKEG
IAFKKNGCVDLKKHIWAEILPII
>Mature_103_residues
MKADFYTEVYNIVKEIPEGNVVTYGQLAKLARRPQCSRMVGQAMFNAPRELNLPCHRVVNSQGRLAPNWTEQRELLEKEG
IAFKKNGCVDLKKHIWAEILPII

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=96, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 11824; Mature: 11824

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00374 MGMT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKADFYTEVYNIVKEIPEGNVVTYGQLAKLARRPQCSRMVGQAMFNAPRELNLPCHRVVN
CCCHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHC
SQGRLAPNWTEQRELLEKEGIAFKKNGCVDLKKHIWAEILPII
CCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKADFYTEVYNIVKEIPEGNVVTYGQLAKLARRPQCSRMVGQAMFNAPRELNLPCHRVVN
CCCHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHC
SQGRLAPNWTEQRELLEKEGIAFKKNGCVDLKKHIWAEILPII
CCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]