| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is glgP [H]
Identifier: 150008619
GI number: 150008619
Start: 2371877
End: 2374447
Strand: Direct
Name: glgP [H]
Synonym: BDI_2005
Alternate gene names: 150008619
Gene position: 2371877-2374447 (Clockwise)
Preceding gene: 150008618
Following gene: 150008621
Centisome position: 49.3
GC content: 45.86
Gene sequence:
>2571_bases ATGAAAATTAAGGCGAATAACGCAAACAGTCCTATTTGGAAGGACGTCTACTCACATTCCAAGCTTCCACAACAGTTGGA ACCACTTAATGAGATCGCTACGAATCTTTGGTGGGTATGGAATCATGAAGGCGCTAAACTATTTGGCAAGATCGACAAAC AACTTTGGAAATCCACAGAAGGTAACCCTGTACAGCTATTGCAAAGCCTTTCACACAAACGTATGGAAGAGATCTTAGCA GATAAGGAGTTAATGGCTGAAATCCAAAAGGTATACGCTGATTTCAAAGCTTATATCAATGTAAAACCCGACAAGACACA ACCGTCTGTAGCCTACTTCAGCATGGAGTACGGTTTGACCAATGTATTAAAGATTTACTCAGGTGGTCTGGGAGTATTAG CCGGTGACTACTTGAAAGAGGCCAGCGATAGCAATATCGATTTATGTGCCGTAGGTTTCTTGTATCGTTACGGATATTTC ACACAGACTTTGTCCATGGACGGTCAGCAGATCGCCAATTACGAGCCGCAAAATTTCAACGCCCTGCCGTTGACTCAGGT ATTGCAGTCGAACGGAGAGCCGATGGTATTGGAAGTTCCTTATCCGGGCAGAACCGTTTACGTTCATATCTGGAAAGTTA GCGTAGGTCGTGTACCTTTGTACTTAATGGATACGGATATTCCTCAGAACAGCGAATGGGATCGTTCCATCACGCACCAA TTATATGGTGGCGACTGGGAAAACCGTATGAAACAAGAGTATTTGTTGGGTATCGGTGGTATCATGATGCTGAACAAGTT AGGTATCAAGAAACAAATTTATCACTGCAACGAGGGACACGCCGCTTTGATCAACGCTCAGCGTTTGGTAGACTATATCC AGAACGACGGCCTTTCATTCAACCAAGCGTTGGAGGTAGTTCGTGCTTCCGCCCTCTATACGGTACACACTCCGGTTCCG GCAGGTCACGATTACTTTGACGAGGGTTTGTTCGGACGTTACATGGGTGAGTTCCCCGGCAAGTTAGGTATTAGCTGGCA AGATTTCATCGACATGGGACGTGAGAACCCAGGTTCTAACGAGAAATTCTCCATGAGCGTATTCGCCTTGAACACTTGCC AAGAGGCTAACGGCGTAAGCTGGTTGCACGGTAAGGTTTCTCAGCGCATGTTCGCCCCGGTTTGGAAAGGTTACTTCCCG GATGAACTGCACGTTGGTTATGTAACGAACGGTGTACATATGCCGACTTGGGCCGCTACCGAGGTGAAGAAATTCTATGC GGATAAATTAGGCACGAAGCTTTTCGAGGATCAATCAAATCGCAAATGTTGGGAAGGAATTCAGAATGTATCCGACGAGG AAATCTGGAATCTCCGTATGACCTTGAAGAATAAATTGATTGATTACATCCGTGTTCAATATAAAGATAGCTGGTTGAAG AACCAAGGTGATCCTTCCAAGGTGGTTTCTATCCTAGAGAAGATCAACCCGAATGCCTTGCTGATCGGTTTCGGTCGTCG TTTCGCTACTTACAAGCGTGCGCACTTGTTGTTCACGGACTTAGACCGTTTGGCTAAGATCGTTAACAATGAGAAGTTCC CGATTCAGTTCGTATTCACCGGTAAGGCTCACCCAGCTGATGGTGGTGGTCAAGGTTTGATCAAACACATCGTAGAGATC TCTCGCCGTCCGGAGTTCTTAGGAAAGATCATCTTCTTGGAGAACTACGATATGCGTTTGGCCCGTCGTTTGATTTCTGG TGTAGACGTATGGTTGAACACGCCGACTCGTCCGTTAGAGGCTTCCGGTACTTCCGGTGAGAAAGCCGAGATGAACGGTG TATTGAACTTCTCCGTTCTTGACGGTTGGTGGTATGAGGGTTACGTAGAAGGCGCAGGTTGGGCATTGACCGACAAGCGT ACTTATGAGAACCAGCAATACCAAGACCAATTGGATGCGGCTACGATCTACCATTGCTTGGAAACTGAGATCATCCCGAC TTACTACGCTAAGAACAGCAAGGGTTACTCTCCGGACTGGATCCAATATATCAAGAACTCTATCGCCAAGATCGCTCCGG ATTATACGATGAAACGTATGTTGGACGATTATGAGGATCGTTTCTATCACAAATTGGCTACTCGTTCCGCTCATATTTCC GCTAACAACTACGAGATCGCTAAGCAATTAGCTGCTTGGAAAGAGGAAGTTGCGCAACATTGGGATAGCTTCCAAGTGGA ATCTTTCACTTGCGACCAAGATTTGACGGTGAATGGCCCGGTTGTAGGAAAAGAATACAACTTCAATTTGGTAATCGACC GTCATGAACTACAAGGTATGTTAGGTGCTGAAATGGTTGTCATGAAGGAAGATCCGGAGAAACACACGCTGTCACCAATC AATACCGCTCAGTTCGAGTTGATGAAGGAAGAAGGCTCCAAGTTATTCTTCAAGTTAACGACCACTCCTTCCGAGGCTGG TAACCATAAGATAGGCTTCCGTGTATATCCTGTAAACAAGGAGTTGCCTCACCGTATGGACTTCGCTTATGTACGTTGGA TTCAGTTATAA
Upstream 100 bases:
>100_bases AAGCATGCCGAGGAAAGAAACAGCTAAATATTGCTCATAATTAATAAGATAATGCTATCTTTGCACTCGTTTTTAGACAA ACACTTTAAACTTCACGATA
Downstream 100 bases:
>100_bases TCGGCAACAAGTAAAACAAATAATCAAGAAAGAGGATGCGTCATGCACCCTCTTTTTTTATGCCATACCCAGCTATGCTT TACAGCGACTAAAACCTATG
Product: glycosyltransferase family alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MKIKANNANSPIWKDVYSHSKLPQQLEPLNEIATNLWWVWNHEGAKLFGKIDKQLWKSTEGNPVQLLQSLSHKRMEEILA DKELMAEIQKVYADFKAYINVKPDKTQPSVAYFSMEYGLTNVLKIYSGGLGVLAGDYLKEASDSNIDLCAVGFLYRYGYF TQTLSMDGQQIANYEPQNFNALPLTQVLQSNGEPMVLEVPYPGRTVYVHIWKVSVGRVPLYLMDTDIPQNSEWDRSITHQ LYGGDWENRMKQEYLLGIGGIMMLNKLGIKKQIYHCNEGHAALINAQRLVDYIQNDGLSFNQALEVVRASALYTVHTPVP AGHDYFDEGLFGRYMGEFPGKLGISWQDFIDMGRENPGSNEKFSMSVFALNTCQEANGVSWLHGKVSQRMFAPVWKGYFP DELHVGYVTNGVHMPTWAATEVKKFYADKLGTKLFEDQSNRKCWEGIQNVSDEEIWNLRMTLKNKLIDYIRVQYKDSWLK NQGDPSKVVSILEKINPNALLIGFGRRFATYKRAHLLFTDLDRLAKIVNNEKFPIQFVFTGKAHPADGGGQGLIKHIVEI SRRPEFLGKIIFLENYDMRLARRLISGVDVWLNTPTRPLEASGTSGEKAEMNGVLNFSVLDGWWYEGYVEGAGWALTDKR TYENQQYQDQLDAATIYHCLETEIIPTYYAKNSKGYSPDWIQYIKNSIAKIAPDYTMKRMLDDYEDRFYHKLATRSAHIS ANNYEIAKQLAAWKEEVAQHWDSFQVESFTCDQDLTVNGPVVGKEYNFNLVIDRHELQGMLGAEMVVMKEDPEKHTLSPI NTAQFELMKEEGSKLFFKLTTTPSEAGNHKIGFRVYPVNKELPHRMDFAYVRWIQL
Sequences:
>Translated_856_residues MKIKANNANSPIWKDVYSHSKLPQQLEPLNEIATNLWWVWNHEGAKLFGKIDKQLWKSTEGNPVQLLQSLSHKRMEEILA DKELMAEIQKVYADFKAYINVKPDKTQPSVAYFSMEYGLTNVLKIYSGGLGVLAGDYLKEASDSNIDLCAVGFLYRYGYF TQTLSMDGQQIANYEPQNFNALPLTQVLQSNGEPMVLEVPYPGRTVYVHIWKVSVGRVPLYLMDTDIPQNSEWDRSITHQ LYGGDWENRMKQEYLLGIGGIMMLNKLGIKKQIYHCNEGHAALINAQRLVDYIQNDGLSFNQALEVVRASALYTVHTPVP AGHDYFDEGLFGRYMGEFPGKLGISWQDFIDMGRENPGSNEKFSMSVFALNTCQEANGVSWLHGKVSQRMFAPVWKGYFP DELHVGYVTNGVHMPTWAATEVKKFYADKLGTKLFEDQSNRKCWEGIQNVSDEEIWNLRMTLKNKLIDYIRVQYKDSWLK NQGDPSKVVSILEKINPNALLIGFGRRFATYKRAHLLFTDLDRLAKIVNNEKFPIQFVFTGKAHPADGGGQGLIKHIVEI SRRPEFLGKIIFLENYDMRLARRLISGVDVWLNTPTRPLEASGTSGEKAEMNGVLNFSVLDGWWYEGYVEGAGWALTDKR TYENQQYQDQLDAATIYHCLETEIIPTYYAKNSKGYSPDWIQYIKNSIAKIAPDYTMKRMLDDYEDRFYHKLATRSAHIS ANNYEIAKQLAAWKEEVAQHWDSFQVESFTCDQDLTVNGPVVGKEYNFNLVIDRHELQGMLGAEMVVMKEDPEKHTLSPI NTAQFELMKEEGSKLFFKLTTTPSEAGNHKIGFRVYPVNKELPHRMDFAYVRWIQL >Mature_856_residues MKIKANNANSPIWKDVYSHSKLPQQLEPLNEIATNLWWVWNHEGAKLFGKIDKQLWKSTEGNPVQLLQSLSHKRMEEILA DKELMAEIQKVYADFKAYINVKPDKTQPSVAYFSMEYGLTNVLKIYSGGLGVLAGDYLKEASDSNIDLCAVGFLYRYGYF TQTLSMDGQQIANYEPQNFNALPLTQVLQSNGEPMVLEVPYPGRTVYVHIWKVSVGRVPLYLMDTDIPQNSEWDRSITHQ LYGGDWENRMKQEYLLGIGGIMMLNKLGIKKQIYHCNEGHAALINAQRLVDYIQNDGLSFNQALEVVRASALYTVHTPVP AGHDYFDEGLFGRYMGEFPGKLGISWQDFIDMGRENPGSNEKFSMSVFALNTCQEANGVSWLHGKVSQRMFAPVWKGYFP DELHVGYVTNGVHMPTWAATEVKKFYADKLGTKLFEDQSNRKCWEGIQNVSDEEIWNLRMTLKNKLIDYIRVQYKDSWLK NQGDPSKVVSILEKINPNALLIGFGRRFATYKRAHLLFTDLDRLAKIVNNEKFPIQFVFTGKAHPADGGGQGLIKHIVEI SRRPEFLGKIIFLENYDMRLARRLISGVDVWLNTPTRPLEASGTSGEKAEMNGVLNFSVLDGWWYEGYVEGAGWALTDKR TYENQQYQDQLDAATIYHCLETEIIPTYYAKNSKGYSPDWIQYIKNSIAKIAPDYTMKRMLDDYEDRFYHKLATRSAHIS ANNYEIAKQLAAWKEEVAQHWDSFQVESFTCDQDLTVNGPVVGKEYNFNLVIDRHELQGMLGAEMVVMKEDPEKHTLSPI NTAQFELMKEEGSKLFFKLTTTPSEAGNHKIGFRVYPVNKELPHRMDFAYVRWIQL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=503, Percent_Identity=22.4652087475149, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI255653002, Length=424, Percent_Identity=23.5849056603774, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI71037379, Length=424, Percent_Identity=23.5849056603774, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI257900462, Length=498, Percent_Identity=21.285140562249, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI5032009, Length=498, Percent_Identity=21.285140562249, Blast_Score=72, Evalue=3e-12, Organism=Escherichia coli, GI48994936, Length=654, Percent_Identity=22.17125382263, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 98157; Mature: 98157
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKANNANSPIWKDVYSHSKLPQQLEPLNEIATNLWWVWNHEGAKLFGKIDKQLWKSTE CEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCC GNPVQLLQSLSHKRMEEILADKELMAEIQKVYADFKAYINVKPDKTQPSVAYFSMEYGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHCHH NVLKIYSGGLGVLAGDYLKEASDSNIDLCAVGFLYRYGYFTQTLSMDGQQIANYEPQNFN HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC ALPLTQVLQSNGEPMVLEVPYPGRTVYVHIWKVSVGRVPLYLMDTDIPQNSEWDRSITHQ CCCHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHH LYGGDWENRMKQEYLLGIGGIMMLNKLGIKKQIYHCNEGHAALINAQRLVDYIQNDGLSF HCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHEEECCCCCEEEEEHHHHHHHHHCCCCCH NQALEVVRASALYTVHTPVPAGHDYFDEGLFGRYMGEFPGKLGISWQDFIDMGRENPGSN HHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC EKFSMSVFALNTCQEANGVSWLHGKVSQRMFAPVWKGYFPDELHVGYVTNGVHMPTWAAT CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCHHH EVKKFYADKLGTKLFEDQSNRKCWEGIQNVSDEEIWNLRMTLKNKLIDYIRVQYKDSWLK HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQGDPSKVVSILEKINPNALLIGFGRRFATYKRAHLLFTDLDRLAKIVNNEKFPIQFVFT CCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPADGGGQGLIKHIVEISRRPEFLGKIIFLENYDMRLARRLISGVDVWLNTPTRPLE CCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCC ASGTSGEKAEMNGVLNFSVLDGWWYEGYVEGAGWALTDKRTYENQQYQDQLDAATIYHCL CCCCCCCCHHCCCEEEEEEECCCEEEEEECCCCEEEECCHHHCCHHHHHHHHHHHHHHHH ETEIIPTYYAKNSKGYSPDWIQYIKNSIAKIAPDYTMKRMLDDYEDRFYHKLATRSAHIS HCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEC ANNYEIAKQLAAWKEEVAQHWDSFQVESFTCDQDLTVNGPVVGKEYNFNLVIDRHELQGM CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCEECCEECEEEEEEHHHHCCC LGAEMVVMKEDPEKHTLSPINTAQFELMKEEGSKLFFKLTTTPSEAGNHKIGFRVYPVNK CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCC ELPHRMDFAYVRWIQL CCCCCCCHHHEEEEEC >Mature Secondary Structure MKIKANNANSPIWKDVYSHSKLPQQLEPLNEIATNLWWVWNHEGAKLFGKIDKQLWKSTE CEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCC GNPVQLLQSLSHKRMEEILADKELMAEIQKVYADFKAYINVKPDKTQPSVAYFSMEYGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHCHH NVLKIYSGGLGVLAGDYLKEASDSNIDLCAVGFLYRYGYFTQTLSMDGQQIANYEPQNFN HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC ALPLTQVLQSNGEPMVLEVPYPGRTVYVHIWKVSVGRVPLYLMDTDIPQNSEWDRSITHQ CCCHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHH LYGGDWENRMKQEYLLGIGGIMMLNKLGIKKQIYHCNEGHAALINAQRLVDYIQNDGLSF HCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHEEECCCCCEEEEEHHHHHHHHHCCCCCH NQALEVVRASALYTVHTPVPAGHDYFDEGLFGRYMGEFPGKLGISWQDFIDMGRENPGSN HHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC EKFSMSVFALNTCQEANGVSWLHGKVSQRMFAPVWKGYFPDELHVGYVTNGVHMPTWAAT CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCHHH EVKKFYADKLGTKLFEDQSNRKCWEGIQNVSDEEIWNLRMTLKNKLIDYIRVQYKDSWLK HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQGDPSKVVSILEKINPNALLIGFGRRFATYKRAHLLFTDLDRLAKIVNNEKFPIQFVFT CCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPADGGGQGLIKHIVEISRRPEFLGKIIFLENYDMRLARRLISGVDVWLNTPTRPLE CCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCC ASGTSGEKAEMNGVLNFSVLDGWWYEGYVEGAGWALTDKRTYENQQYQDQLDAATIYHCL CCCCCCCCHHCCCEEEEEEECCCEEEEEECCCCEEEECCHHHCCHHHHHHHHHHHHHHHH ETEIIPTYYAKNSKGYSPDWIQYIKNSIAKIAPDYTMKRMLDDYEDRFYHKLATRSAHIS HCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEC ANNYEIAKQLAAWKEEVAQHWDSFQVESFTCDQDLTVNGPVVGKEYNFNLVIDRHELQGM CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCEECCEECEEEEEEHHHHCCC LGAEMVVMKEDPEKHTLSPINTAQFELMKEEGSKLFFKLTTTPSEAGNHKIGFRVYPVNK CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCC ELPHRMDFAYVRWIQL CCCCCCCHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]