| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yieL [H]
Identifier: 150008621
GI number: 150008621
Start: 2376394
End: 2377563
Strand: Direct
Name: yieL [H]
Synonym: BDI_2007
Alternate gene names: 150008621
Gene position: 2376394-2377563 (Clockwise)
Preceding gene: 150008619
Following gene: 150008622
Centisome position: 49.39
GC content: 48.89
Gene sequence:
>1170_bases ATGAAAAGACTAGCATTACTCGCAGCTCTCTTACTGCCGCTATCCATGGTTTTCGCCCAACAGAACGTAGGATTCAAGAC CGATAAGGTAGAACCTCTCGTGATCAACCCAGACAATAGCGTTACTTTCTATGTAGAAGCCCCAAAGGCGAAGTCCGTCT CCGTAAAAGGAGACTGGGAAGCCAACGAGGGCAATGGCCAGATGACGAAAGGGAAAAACGGTACATGGAGCTATACGACT CCCCCACTGCCATCCGAAATGTACACCTATCGTTTAAACATAGATGGTATTTACAACATCGCCCCAAACAACCCATTCTC TTGCCGTGACGTAGGCACCTTGTTCAGCCTGTTCTATATCAACGGGGGAAATGGGGATTATTATCAAGTACGTGACGTGC CCCATGGCGATGTAACGACCACGTGGTATCACTCGGATATCCTCGGGAGCGAACGTAGGCTTAGCGTTTATACACCTCCT TTTTACGATAAGAACATCCAGTCTTATCCCGTTCTGTACCTGTTACATGGCAGTGGCGGCGACGAGAACGCTTGGCTGGA GCTTGGCCGTACCGCCCGTATCATGGATAACTTGATTGCCGAAGGCAAGATACAGCCAATGCTTGTCGTTATGCCAAACG GCAATCCCAGTAAACAGGCCGCTCCCGGCGAAACGCCCGATAACCTGAATTACAAGCCGGCCATGAGCAACAGCTTCCCC GGTTATAAGGATGGCTCGTACGAGAAGAGTTTCACCGAGATCATTCATTTCATCGATAACCGTTACCGTACGATCCCGGA TAAGCGACACCGAGCCATAGCCGGACTTTCGATGGGTGGTTTCCATACATTATATATATCATTGAATTATCCGGACTATT TTAACTATATAGGACTTTTCTCCGCTGGGCTCAGCGCAAATGGTGTAGACCCCAATAGCCCGATGTACACGAACCTCGAC GAGAAGTTAGGAAACCTCAAGAGATCCGGTTATCAATTGTTCTGGATCGGTATCGGAAAGGACGATTTCCTGTACGACGC GAACCAGCAATTCCGCCAGCGAATGGATAGCCTAGGTATGAAATACCAGTACGTAGAATCCACCCGAGGGCATATCTGGG CCAATTGGCGGGCTTATCTCCTCCAATTCGCTCCTATGCTTTTCAAATAA
Upstream 100 bases:
>100_bases AAAGATATACTACAAGTGCCAAGTAAGTATAACTTCTATTTTTCCGAAATAAATCGTATATTTGTCTCTATAACTTAATT CTTTAAACCGTATAGATAAA
Downstream 100 bases:
>100_bases AAGACATGAGCAGATGAATCATAATATACCGCAATACGACTTCTATAAACACAAATACGGCGATGAGCTACTTATCGACG TCGTTCCCTTGAACACGATC
Product: putative xylanase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKRLALLAALLLPLSMVFAQQNVGFKTDKVEPLVINPDNSVTFYVEAPKAKSVSVKGDWEANEGNGQMTKGKNGTWSYTT PPLPSEMYTYRLNIDGIYNIAPNNPFSCRDVGTLFSLFYINGGNGDYYQVRDVPHGDVTTTWYHSDILGSERRLSVYTPP FYDKNIQSYPVLYLLHGSGGDENAWLELGRTARIMDNLIAEGKIQPMLVVMPNGNPSKQAAPGETPDNLNYKPAMSNSFP GYKDGSYEKSFTEIIHFIDNRYRTIPDKRHRAIAGLSMGGFHTLYISLNYPDYFNYIGLFSAGLSANGVDPNSPMYTNLD EKLGNLKRSGYQLFWIGIGKDDFLYDANQQFRQRMDSLGMKYQYVESTRGHIWANWRAYLLQFAPMLFK
Sequences:
>Translated_389_residues MKRLALLAALLLPLSMVFAQQNVGFKTDKVEPLVINPDNSVTFYVEAPKAKSVSVKGDWEANEGNGQMTKGKNGTWSYTT PPLPSEMYTYRLNIDGIYNIAPNNPFSCRDVGTLFSLFYINGGNGDYYQVRDVPHGDVTTTWYHSDILGSERRLSVYTPP FYDKNIQSYPVLYLLHGSGGDENAWLELGRTARIMDNLIAEGKIQPMLVVMPNGNPSKQAAPGETPDNLNYKPAMSNSFP GYKDGSYEKSFTEIIHFIDNRYRTIPDKRHRAIAGLSMGGFHTLYISLNYPDYFNYIGLFSAGLSANGVDPNSPMYTNLD EKLGNLKRSGYQLFWIGIGKDDFLYDANQQFRQRMDSLGMKYQYVESTRGHIWANWRAYLLQFAPMLFK >Mature_389_residues MKRLALLAALLLPLSMVFAQQNVGFKTDKVEPLVINPDNSVTFYVEAPKAKSVSVKGDWEANEGNGQMTKGKNGTWSYTT PPLPSEMYTYRLNIDGIYNIAPNNPFSCRDVGTLFSLFYINGGNGDYYQVRDVPHGDVTTTWYHSDILGSERRLSVYTPP FYDKNIQSYPVLYLLHGSGGDENAWLELGRTARIMDNLIAEGKIQPMLVVMPNGNPSKQAAPGETPDNLNYKPAMSNSFP GYKDGSYEKSFTEIIHFIDNRYRTIPDKRHRAIAGLSMGGFHTLYISLNYPDYFNYIGLFSAGLSANGVDPNSPMYTNLD EKLGNLKRSGYQLFWIGIGKDDFLYDANQQFRQRMDSLGMKYQYVESTRGHIWANWRAYLLQFAPMLFK
Specific function: Unknown
COG id: COG2382
COG function: function code P; Enterochelin esterase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693201, Length=370, Percent_Identity=32.1621621621622, Blast_Score=158, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR004193 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02922 CBM_48; PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 44031; Mature: 44031
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLALLAALLLPLSMVFAQQNVGFKTDKVEPLVINPDNSVTFYVEAPKAKSVSVKGDWE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCC ANEGNGQMTKGKNGTWSYTTPPLPSEMYTYRLNIDGIYNIAPNNPFSCRDVGTLFSLFYI CCCCCCCEECCCCCCEECCCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHCEEEEEEE NGGNGDYYQVRDVPHGDVTTTWYHSDILGSERRLSVYTPPFYDKNIQSYPVLYLLHGSGG ECCCCCEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC DENAWLELGRTARIMDNLIAEGKIQPMLVVMPNGNPSKQAAPGETPDNLNYKPAMSNSFP CCCHHEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GYKDGSYEKSFTEIIHFIDNRYRTIPDKRHRAIAGLSMGGFHTLYISLNYPDYFNYIGLF CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCEEEEEEEECCCHHHHHHHHH SAGLSANGVDPNSPMYTNLDEKLGNLKRSGYQLFWIGIGKDDFLYDANQQFRQRMDSLGM HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC KYQYVESTRGHIWANWRAYLLQFAPMLFK EEEEEECCCCEEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLALLAALLLPLSMVFAQQNVGFKTDKVEPLVINPDNSVTFYVEAPKAKSVSVKGDWE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCC ANEGNGQMTKGKNGTWSYTTPPLPSEMYTYRLNIDGIYNIAPNNPFSCRDVGTLFSLFYI CCCCCCCEECCCCCCEECCCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHCEEEEEEE NGGNGDYYQVRDVPHGDVTTTWYHSDILGSERRLSVYTPPFYDKNIQSYPVLYLLHGSGG ECCCCCEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC DENAWLELGRTARIMDNLIAEGKIQPMLVVMPNGNPSKQAAPGETPDNLNYKPAMSNSFP CCCHHEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GYKDGSYEKSFTEIIHFIDNRYRTIPDKRHRAIAGLSMGGFHTLYISLNYPDYFNYIGLF CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCEEEEEEEECCCHHHHHHHHH SAGLSANGVDPNSPMYTNLDEKLGNLKRSGYQLFWIGIGKDDFLYDANQQFRQRMDSLGM HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC KYQYVESTRGHIWANWRAYLLQFAPMLFK EEEEEECCCCEEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]