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The map label for this gene is ycaL [H]

Identifier: 150008440

GI number: 150008440

Start: 2173401

End: 2174198

Strand: Direct

Name: ycaL [H]

Synonym: BDI_1822

Alternate gene names: 150008440

Gene position: 2173401-2174198 (Clockwise)

Preceding gene: 150008439

Following gene: 150008441

Centisome position: 45.17

GC content: 46.74

Gene sequence:

>798_bases
ATGAAAAAAATCTTATTGTCCTTGGCTTTCTTAGCAGGAGTGAGCCTAACAGTTTCCGCCCAATTCAAGATTGGCGGCAA
GACCATTAATACGAAAAAAGTGATTAATGCCGCGACTGATGTAGCGCATGCCGCTACTCTATCCGACGAGGATGTAGCCA
AAATGGCAAAAGAGTACATCCAATGGATGGACACTCATAACGAGGTAGCGGGCCCGGATACGGAAATGGGACAACGCTTG
GAACGCTTGACCGCCAATGTAAAAAAAGTTTCCGGCCTAGACTTAAACTTTAAAGTATATAATGTAGTAGATGTAAACGC
TTTCGCCTGTGGAGACGGAAGTGTACGCGTATGTGGCGGATTGATGAAAATCATGGACGATGACGAGGTATTCGCCGTTA
TCGGTCATGAGATCGGGCACGTCGTTCATTCCGACTCTAAAGACGCCATGAAAAACGCTTACTTGACCTCCGCCGCTAAA
AACGCCGCCGGAGCCGTAAGTGGAACCGTATCCAAGCTGACCGACTCTCAACTGGGAGACATGGCACAGGCATTGGCTGG
CGCTCAATATTCCCAGAAACAAGAGTATGAGGCGGACGAATTCGGTTTCCAGTTTTGTATAGATTACGGGCGAGATCCGT
ACGGAATGTCTAACTCATTAAATAAATTGTTACAACTGAGTGAGTCGGAAGCTAAATCGTCCAAGTTTATGCAGATGTTC
TCAAGCCATCCCGAGACTCAAAAACGTGCCGATCGGGTAAAAGAGAAGGCCGATGAGTACGTGAAAAGCAAGCAATAA

Upstream 100 bases:

>100_bases
CATTATACCTATTGAACAAAGAGAAGAAAGTATTGTTGAAAGATGCTACTTTTCAACAGATCGAAAATTATTTATCACAA
ACAACTAACTAATTTAAAAC

Downstream 100 bases:

>100_bases
CTGTTAACGGTCCTTTAGCAGGACGGACTATTATTAAAATAAAGCTAACGTATCAAGGATTTACGCCACGAAATCATGCT
GTACAACATAAAATACTATA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKKILLSLAFLAGVSLTVSAQFKIGGKTINTKKVINAATDVAHAATLSDEDVAKMAKEYIQWMDTHNEVAGPDTEMGQRL
ERLTANVKKVSGLDLNFKVYNVVDVNAFACGDGSVRVCGGLMKIMDDDEVFAVIGHEIGHVVHSDSKDAMKNAYLTSAAK
NAAGAVSGTVSKLTDSQLGDMAQALAGAQYSQKQEYEADEFGFQFCIDYGRDPYGMSNSLNKLLQLSESEAKSSKFMQMF
SSHPETQKRADRVKEKADEYVKSKQ

Sequences:

>Translated_265_residues
MKKILLSLAFLAGVSLTVSAQFKIGGKTINTKKVINAATDVAHAATLSDEDVAKMAKEYIQWMDTHNEVAGPDTEMGQRL
ERLTANVKKVSGLDLNFKVYNVVDVNAFACGDGSVRVCGGLMKIMDDDEVFAVIGHEIGHVVHSDSKDAMKNAYLTSAAK
NAAGAVSGTVSKLTDSQLGDMAQALAGAQYSQKQEYEADEFGFQFCIDYGRDPYGMSNSLNKLLQLSESEAKSSKFMQMF
SSHPETQKRADRVKEKADEYVKSKQ
>Mature_265_residues
MKKILLSLAFLAGVSLTVSAQFKIGGKTINTKKVINAATDVAHAATLSDEDVAKMAKEYIQWMDTHNEVAGPDTEMGQRL
ERLTANVKKVSGLDLNFKVYNVVDVNAFACGDGSVRVCGGLMKIMDDDEVFAVIGHEIGHVVHSDSKDAMKNAYLTSAAK
NAAGAVSGTVSKLTDSQLGDMAQALAGAQYSQKQEYEADEFGFQFCIDYGRDPYGMSNSLNKLLQLSESEAKSSKFMQMF
SSHPETQKRADRVKEKADEYVKSKQ

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87081800, Length=257, Percent_Identity=36.5758754863813, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI87082185, Length=244, Percent_Identity=34.4262295081967, Blast_Score=151, Evalue=4e-38,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28844; Mature: 28844

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLSLAFLAGVSLTVSAQFKIGGKTINTKKVINAATDVAHAATLSDEDVAKMAKEYI
CHHHHHHHHHHHCCEEEEEEEEEECCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QWMDTHNEVAGPDTEMGQRLERLTANVKKVSGLDLNFKVYNVVDVNAFACGDGSVRVCGG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCHHHHHH
LMKIMDDDEVFAVIGHEIGHVVHSDSKDAMKNAYLTSAAKNAAGAVSGTVSKLTDSQLGD
HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
MAQALAGAQYSQKQEYEADEFGFQFCIDYGRDPYGMSNSLNKLLQLSESEAKSSKFMQMF
HHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSHPETQKRADRVKEKADEYVKSKQ
HCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKILLSLAFLAGVSLTVSAQFKIGGKTINTKKVINAATDVAHAATLSDEDVAKMAKEYI
CHHHHHHHHHHHCCEEEEEEEEEECCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QWMDTHNEVAGPDTEMGQRLERLTANVKKVSGLDLNFKVYNVVDVNAFACGDGSVRVCGG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCHHHHHH
LMKIMDDDEVFAVIGHEIGHVVHSDSKDAMKNAYLTSAAKNAAGAVSGTVSKLTDSQLGD
HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
MAQALAGAQYSQKQEYEADEFGFQFCIDYGRDPYGMSNSLNKLLQLSESEAKSSKFMQMF
HHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSHPETQKRADRVKEKADEYVKSKQ
HCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7836281 [H]