Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is yeiH [C]

Identifier: 150008437

GI number: 150008437

Start: 2170329

End: 2171384

Strand: Reverse

Name: yeiH [C]

Synonym: BDI_1819

Alternate gene names: 150008437

Gene position: 2171384-2170329 (Counterclockwise)

Preceding gene: 150008438

Following gene: 150008436

Centisome position: 45.13

GC content: 47.44

Gene sequence:

>1056_bases
ATGTTTAGCGAAAAACGAGGTAACGTATTACATGGTGTCTTGCTGATAGCCCTTTTCTCTTGTTCCGCATTCTATATCGC
GGAGTTCCAGTTTGTTAAACAAATGTCATTCAGTCCGCTGATTGTCGGTATTATTTTAGGTATGTTATACGCCAACAGCC
TGAGAAACCATTTGCCGGAGACGTGGGTTCCGGGTATCCTGTTTTGTACTAAGCAAGTACTTCGTGCGGGTATCGTACTA
TATGGGTTTAAGCTGACCTTCCAGAGCGTGATTGCGATCGGCCTTCCGGCAATCCTGATCGATATGGTGATCGTGGTGCT
TACCATCTTGATCGGTGTTTGGGTGGGACGATTGATGAAAATGGATAAAGACCTTGCTTTACTGACTGCCACGGGTAGCG
CTATTTGCGGGGCTGCCGCGGTATTGGGCGCTGAACCGGTCGTGAAGTGCGAGGCTCATAAGACGGCGGTTGCCGTATCG
ACAGTCGTGATTTTCGGTACGCTTTCTATGTTTATTTATCCGGTGATGTATCGTGCGGGTATTCTTGATTTAGACCCGGA
GCAAATGGGACTTTATACGGGTGCGACCTTGCATGAGGTAGCTCATGTGGTAGGAGCCGGTAACGCTATGGGAAAGGAAA
TTTCGGATGCGGCTATTATCGTGAAAATGATTCGTGTGATGATGTTAGCTCCTGTGCTAGTGGTCATGAGTTTCATGTTG
GCTCGAACCGCCGTGAATTCCGTGGTTAACGGGGGGAGGAATGGCGGAGGCGTTGCCCCTTCTCGTGGTAAGATCACTAT
TCCTTGGTTTGCGTTTGGTTTCTTGGCCGTGATTGGTTTCAATTCGCTCGACTTGCTTCCTCATGCGGTTGTAGATGGGA
TCAATCAGGTAGATACATTCATGCTGACAATGGCCATGACTGCTCTTGGTACGGAGACAAGTATCGAGAAATTTAAGAAA
GCTGGCGCTAAGCCCTTTGTTTTGGCCACTATTTTATATGTTTGGTTACTAGCTGGTGGTTATTTGTTGGCGAAATATGT
GCCTCAACTTGCATAA

Upstream 100 bases:

>100_bases
ATTCGCTATAAAAACTTGTGAAGTAAGGGATCGGATGAAAATATGTACTTTCGCGAACGAAATCAAATGATGATATGTTG
TACTAAATAAATCAATAATT

Downstream 100 bases:

>100_bases
GATCGTATTTTCCTCTATTTTTGTGATCTTAAATAGGTCGTTGTGGATAAGATGAGTCTCTTATCCATACCGTGAAATAT
AAAAAGATGGCATCAAAGAT

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL
YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS
TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML
ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK
AGAKPFVLATILYVWLLAGGYLLAKYVPQLA

Sequences:

>Translated_351_residues
MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL
YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS
TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML
ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK
AGAKPFVLATILYVWLLAGGYLLAKYVPQLA
>Mature_351_residues
MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL
YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS
TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML
ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK
AGAKPFVLATILYVWLLAGGYLLAKYVPQLA

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=330, Percent_Identity=43.9393939393939, Blast_Score=250, Evalue=8e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004630
- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 37564; Mature: 37564

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]