| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yeiH [C]
Identifier: 150008437
GI number: 150008437
Start: 2170329
End: 2171384
Strand: Reverse
Name: yeiH [C]
Synonym: BDI_1819
Alternate gene names: 150008437
Gene position: 2171384-2170329 (Counterclockwise)
Preceding gene: 150008438
Following gene: 150008436
Centisome position: 45.13
GC content: 47.44
Gene sequence:
>1056_bases ATGTTTAGCGAAAAACGAGGTAACGTATTACATGGTGTCTTGCTGATAGCCCTTTTCTCTTGTTCCGCATTCTATATCGC GGAGTTCCAGTTTGTTAAACAAATGTCATTCAGTCCGCTGATTGTCGGTATTATTTTAGGTATGTTATACGCCAACAGCC TGAGAAACCATTTGCCGGAGACGTGGGTTCCGGGTATCCTGTTTTGTACTAAGCAAGTACTTCGTGCGGGTATCGTACTA TATGGGTTTAAGCTGACCTTCCAGAGCGTGATTGCGATCGGCCTTCCGGCAATCCTGATCGATATGGTGATCGTGGTGCT TACCATCTTGATCGGTGTTTGGGTGGGACGATTGATGAAAATGGATAAAGACCTTGCTTTACTGACTGCCACGGGTAGCG CTATTTGCGGGGCTGCCGCGGTATTGGGCGCTGAACCGGTCGTGAAGTGCGAGGCTCATAAGACGGCGGTTGCCGTATCG ACAGTCGTGATTTTCGGTACGCTTTCTATGTTTATTTATCCGGTGATGTATCGTGCGGGTATTCTTGATTTAGACCCGGA GCAAATGGGACTTTATACGGGTGCGACCTTGCATGAGGTAGCTCATGTGGTAGGAGCCGGTAACGCTATGGGAAAGGAAA TTTCGGATGCGGCTATTATCGTGAAAATGATTCGTGTGATGATGTTAGCTCCTGTGCTAGTGGTCATGAGTTTCATGTTG GCTCGAACCGCCGTGAATTCCGTGGTTAACGGGGGGAGGAATGGCGGAGGCGTTGCCCCTTCTCGTGGTAAGATCACTAT TCCTTGGTTTGCGTTTGGTTTCTTGGCCGTGATTGGTTTCAATTCGCTCGACTTGCTTCCTCATGCGGTTGTAGATGGGA TCAATCAGGTAGATACATTCATGCTGACAATGGCCATGACTGCTCTTGGTACGGAGACAAGTATCGAGAAATTTAAGAAA GCTGGCGCTAAGCCCTTTGTTTTGGCCACTATTTTATATGTTTGGTTACTAGCTGGTGGTTATTTGTTGGCGAAATATGT GCCTCAACTTGCATAA
Upstream 100 bases:
>100_bases ATTCGCTATAAAAACTTGTGAAGTAAGGGATCGGATGAAAATATGTACTTTCGCGAACGAAATCAAATGATGATATGTTG TACTAAATAAATCAATAATT
Downstream 100 bases:
>100_bases GATCGTATTTTCCTCTATTTTTGTGATCTTAAATAGGTCGTTGTGGATAAGATGAGTCTCTTATCCATACCGTGAAATAT AAAAAGATGGCATCAAAGAT
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK AGAKPFVLATILYVWLLAGGYLLAKYVPQLA
Sequences:
>Translated_351_residues MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK AGAKPFVLATILYVWLLAGGYLLAKYVPQLA >Mature_351_residues MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPETWVPGILFCTKQVLRAGIVL YGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMKMDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVS TVVIFGTLSMFIYPVMYRAGILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTFMLTMAMTALGTETSIEKFKK AGAKPFVLATILYVWLLAGGYLLAKYVPQLA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=330, Percent_Identity=43.9393939393939, Blast_Score=250, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 37564; Mature: 37564
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TWVPGILFCTKQVLRAGIVLYGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVSTVVIFGTLSMFIYPVMYRAG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML CCCCCHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTF HHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH MLTMAMTALGTETSIEKFKKAGAKPFVLATILYVWLLAGGYLLAKYVPQLA HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSEKRGNVLHGVLLIALFSCSAFYIAEFQFVKQMSFSPLIVGIILGMLYANSLRNHLPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TWVPGILFCTKQVLRAGIVLYGFKLTFQSVIAIGLPAILIDMVIVVLTILIGVWVGRLMK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDKDLALLTATGSAICGAAAVLGAEPVVKCEAHKTAVAVSTVVIFGTLSMFIYPVMYRAG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ILDLDPEQMGLYTGATLHEVAHVVGAGNAMGKEISDAAIIVKMIRVMMLAPVLVVMSFML CCCCCHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTAVNSVVNGGRNGGGVAPSRGKITIPWFAFGFLAVIGFNSLDLLPHAVVDGINQVDTF HHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH MLTMAMTALGTETSIEKFKKAGAKPFVLATILYVWLLAGGYLLAKYVPQLA HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]