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The map label for this gene is recJ [H]

Identifier: 150008372

GI number: 150008372

Start: 2069673

End: 2071397

Strand: Direct

Name: recJ [H]

Synonym: BDI_1746

Alternate gene names: 150008372

Gene position: 2069673-2071397 (Clockwise)

Preceding gene: 150008366

Following gene: 150008373

Centisome position: 43.02

GC content: 50.78

Gene sequence:

>1725_bases
ATGATTAACAAATGGAACTTTCAAACCCCATCAGAAGAAGAGTTACATAAGAGAGACCAATTGGTGGCTGAATTAGGATT
CAGCCCGGTGATCTGTCTCTTGCTCGTTCAACGAGGTATCACTTCGATCGAAGAGGCGAAGAAATTCTTTAAACCCAGCT
TGAACGATTTGCACGACCCGTTCCTTATGCCGGATATGGATAAGGCGGTGAGGCGCTTGAACAAAGCCTTAGGGAATAAA
GAAAAGATTTTGATCTACGGCGATTACGACGTGGATGGAACGACAGCGGTATCGCTCGTCTTCAAGTATTTAAGACCTTA
CTCGTCTACCTTGGATTTCTATATCCCGGACCGGTACGACGAGGGGTACGGTATCTCTTACAAGGGTATCGATTATGCCG
CCGAGAACGGCGTGTCGCTGGTTATCTCGCTGGATTGCGGTATCAAAGCGATCGAGAAGATCGAGTACGCCAAGGAGAAA
GGCATCGACTTTATTATTTGCGACCACCATATGCCGGACGCCACTTTGCCGGACGCTGTCGCCGTATTGGATGCCAAGCG
CTCGGATTCTATCTATCCGTATGAGCATTTATCGGGTTGCGGAGTGGGATTCAAGTTCATGCAGGCGTTCGCCAAGAGCA
ATAATTTCCCGTTCTCGGATCTGGAGAAGTTGTTGGAGCTGACAGCGGTCAGTATCGCCTCGGATATCGTCCCGATTACG
GGAGAGAACCGCATCCTCGCCTATTACGGGCTGAAGCAATTGAACAGCAACCCCAGCCTCGGGCTGAAAGGGATTATCGA
TATCTGCGGATTGACCGGAAAGGAGATCACGATCAGTGATATCGTCTTCAAGATCGGTCCCCGTATCAACGCTTCCGGCC
GTATGATGAACGGGAAGGAGGCGGTGGAACTGCTACTGTCCAAGGATAGCGCCAGTGCCCGGGAGAAGAGCGAGAGCATC
AACCAATATAATGAGGAACGCCGAGAATTGGACAAGAAGATCACCGACGAGGCTAACGCTGTCATCGACGAAGTAGAGAA
CATGGATGACCGGAAGGCGATCGTGGTGTATAACCCGGGATGGCACAAAGGCGTGATCGGTATCGTAGCGTCCCGTTTGA
CCGAGAAGTATTACCGTCCGGCGGTCGTTCTTACCAAATCGTCCGAGTTGATCACCGGATCGGCACGTTCCGTAACAGGC
TTCGATATTTACAAGGCGATAGAGAGTTGCCGGGATTTATTGGAGAATTTCGGGGGACATACCTACGCCGCCGGGCTTTC
CCTTCGGGAGGAGAACCTAGAGGCATTCACCGAGCGTTTCTTGAAGATCGCATCCGAGGAGATCATACCGGAGCAGATGA
TCCCGCAGATCGATATCGACGCTATCTTGGATTTGAAAGAGATCAACCAGAAGTTCGTGAACGACCTAAAGAAGATGAGT
CCGTTCGGGCCGGACAACCAAAAGCCCGTATTCTGTTCGCTTGGCGTAAAGGACTACGGCACCAGTAAGCTCGTGGGTAA
GGAACTGGAGCATCTCAAGCTGGAATTGATCGACGGAAACTCAAGCACCCCCATGCACGCCATCGCTTTCGGCATGCACA
GGTACAACGACCATATCAAGGGTATGAAGCCTTTCAACATCTGTTACACGGTGGAGGAGAACACCTACAACGGCAACACC
TCTATCCAGCTGATGATCAAAGACATCAAACCCGACGATATATGA

Upstream 100 bases:

>100_bases
TGAAATATATTGCGGAAATCTCGCCTTTGTCATACGGTAGATTAAGGATGACAAGGTATCCGTAGTATCAGGCAAGCAAA
AAAGAAAAAAACAATATATA

Downstream 100 bases:

>100_bases
GGAGGACAGGTGGACGTCTACCATAAGATATTAGAGAAGTATTGGGGATACCCTGCTTTTCGCCCCTTGCAGGAGGATAT
TATCCATTCCGTCTGTGCCG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MINKWNFQTPSEEELHKRDQLVAELGFSPVICLLLVQRGITSIEEAKKFFKPSLNDLHDPFLMPDMDKAVRRLNKALGNK
EKILIYGDYDVDGTTAVSLVFKYLRPYSSTLDFYIPDRYDEGYGISYKGIDYAAENGVSLVISLDCGIKAIEKIEYAKEK
GIDFIICDHHMPDATLPDAVAVLDAKRSDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSDLEKLLELTAVSIASDIVPIT
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKEAVELLLSKDSASAREKSESI
NQYNEERRELDKKITDEANAVIDEVENMDDRKAIVVYNPGWHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTG
FDIYKAIESCRDLLENFGGHTYAAGLSLREENLEAFTERFLKIASEEIIPEQMIPQIDIDAILDLKEINQKFVNDLKKMS
PFGPDNQKPVFCSLGVKDYGTSKLVGKELEHLKLELIDGNSSTPMHAIAFGMHRYNDHIKGMKPFNICYTVEENTYNGNT
SIQLMIKDIKPDDI

Sequences:

>Translated_574_residues
MINKWNFQTPSEEELHKRDQLVAELGFSPVICLLLVQRGITSIEEAKKFFKPSLNDLHDPFLMPDMDKAVRRLNKALGNK
EKILIYGDYDVDGTTAVSLVFKYLRPYSSTLDFYIPDRYDEGYGISYKGIDYAAENGVSLVISLDCGIKAIEKIEYAKEK
GIDFIICDHHMPDATLPDAVAVLDAKRSDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSDLEKLLELTAVSIASDIVPIT
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKEAVELLLSKDSASAREKSESI
NQYNEERRELDKKITDEANAVIDEVENMDDRKAIVVYNPGWHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTG
FDIYKAIESCRDLLENFGGHTYAAGLSLREENLEAFTERFLKIASEEIIPEQMIPQIDIDAILDLKEINQKFVNDLKKMS
PFGPDNQKPVFCSLGVKDYGTSKLVGKELEHLKLELIDGNSSTPMHAIAFGMHRYNDHIKGMKPFNICYTVEENTYNGNT
SIQLMIKDIKPDDI
>Mature_574_residues
MINKWNFQTPSEEELHKRDQLVAELGFSPVICLLLVQRGITSIEEAKKFFKPSLNDLHDPFLMPDMDKAVRRLNKALGNK
EKILIYGDYDVDGTTAVSLVFKYLRPYSSTLDFYIPDRYDEGYGISYKGIDYAAENGVSLVISLDCGIKAIEKIEYAKEK
GIDFIICDHHMPDATLPDAVAVLDAKRSDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSDLEKLLELTAVSIASDIVPIT
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKEAVELLLSKDSASAREKSESI
NQYNEERRELDKKITDEANAVIDEVENMDDRKAIVVYNPGWHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTG
FDIYKAIESCRDLLENFGGHTYAAGLSLREENLEAFTERFLKIASEEIIPEQMIPQIDIDAILDLKEINQKFVNDLKKMS
PFGPDNQKPVFCSLGVKDYGTSKLVGKELEHLKLELIDGNSSTPMHAIAFGMHRYNDHIKGMKPFNICYTVEENTYNGNT
SIQLMIKDIKPDDI

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=579, Percent_Identity=29.5336787564767, Blast_Score=288, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64304; Mature: 64304

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKWNFQTPSEEELHKRDQLVAELGFSPVICLLLVQRGITSIEEAKKFFKPSLNDLHDP
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCC
FLMPDMDKAVRRLNKALGNKEKILIYGDYDVDGTTAVSLVFKYLRPYSSTLDFYIPDRYD
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCC
EGYGISYKGIDYAAENGVSLVISLDCGIKAIEKIEYAKEKGIDFIICDHHMPDATLPDAV
CCCCCEECCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
AVLDAKRSDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSDLEKLLELTAVSIASDIVPIT
HHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEC
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKE
CCCEEEEEECHHHCCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHH
AVELLLSKDSASAREKSESINQYNEERRELDKKITDEANAVIDEVENMDDRKAIVVYNPG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
WHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTGFDIYKAIESCRDLLENFGGH
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
TYAAGLSLREENLEAFTERFLKIASEEIIPEQMIPQIDIDAILDLKEINQKFVNDLKKMS
EEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
PFGPDNQKPVFCSLGVKDYGTSKLVGKELEHLKLELIDGNSSTPMHAIAFGMHRYNDHIK
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCC
GMKPFNICYTVEENTYNGNTSIQLMIKDIKPDDI
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MINKWNFQTPSEEELHKRDQLVAELGFSPVICLLLVQRGITSIEEAKKFFKPSLNDLHDP
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCC
FLMPDMDKAVRRLNKALGNKEKILIYGDYDVDGTTAVSLVFKYLRPYSSTLDFYIPDRYD
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCC
EGYGISYKGIDYAAENGVSLVISLDCGIKAIEKIEYAKEKGIDFIICDHHMPDATLPDAV
CCCCCEECCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
AVLDAKRSDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSDLEKLLELTAVSIASDIVPIT
HHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEC
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKE
CCCEEEEEECHHHCCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHH
AVELLLSKDSASAREKSESINQYNEERRELDKKITDEANAVIDEVENMDDRKAIVVYNPG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
WHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTGFDIYKAIESCRDLLENFGGH
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
TYAAGLSLREENLEAFTERFLKIASEEIIPEQMIPQIDIDAILDLKEINQKFVNDLKKMS
EEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
PFGPDNQKPVFCSLGVKDYGTSKLVGKELEHLKLELIDGNSSTPMHAIAFGMHRYNDHIK
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCC
GMKPFNICYTVEENTYNGNTSIQLMIKDIKPDDI
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]