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The map label for this gene is mmsR [H]

Identifier: 150008262

GI number: 150008262

Start: 1924037

End: 1924927

Strand: Direct

Name: mmsR [H]

Synonym: BDI_1631

Alternate gene names: 150008262

Gene position: 1924037-1924927 (Clockwise)

Preceding gene: 150008253

Following gene: 150008263

Centisome position: 39.99

GC content: 43.21

Gene sequence:

>891_bases
ATGGTCAAGATAAAAGAAGGATTTAAGGGAGAACGGCTCGTTTCTTTACCCGAGGAACTATTGGCAAGCTACCGGAGGGA
ACCGCTCATCAATAATTTATATGTACGCAAGATAGGTTTCTTCCCACGTGTTAAATATCATTTTCTCCAAAAAGAACATG
GCTGTGACTACGCCATGCTTATTTATTGTACGGAGGGAAAAGGATGGTATCGTATCCTCGGTAAACAATATACCGTGGAG
AAATACCAATATATCATCATCCCTCCCGGTATCCCCTACTCATTCGGGGCAGACGAGGGAGATCCATGGACTATTTACTG
GTTACACTTCCAAGGGAAGCTTTGCGATCAATTCCTGCCGTCGCATCCGGTTCCGGTCACTATTTCGCCGAATGAATATT
CCCGTTTACAAGATCGGTTACGGCTGTTTGAGGAGATATATAGCAGTTTCTCCATGGGATATATTAAAGAATATATGATT
TATTCCTCCATGTGCCTTTACAATTTTCTGGCCTCTTTCATCTATCTGGAGCAATTCCGCCATATCATGATTCCCTCGCA
AAAAGAATATCCGTTCACGGCACGGGTTATTCATTATATGCGTGAGAACATCCAGCAGAATCTTACCTTGAAGGAATTAG
CGTCTTATTTCAAATATTCCCCTTCTCACTTCTCTGCTCTCTTCTTTGGCGAGACCGGGGTCTCGCCCATGAATTACTTC
ATACGCTTGAAAATACAGAAGGCTTGTGAATATATCGAGCTAACGAATATGAAGTTGAATGAGATCGCCACGCATCTGGG
ATTCGAGGATGCCGCCTACTTCTCGCGTACGTTTACGAAAGTTATGGGTTGCTCTCCTTCCGTTTATCGTAAAAAGGAGA
TGGAGATATAG

Upstream 100 bases:

>100_bases
CATTATGTTATGATTTATGTCGGCAAAATTATTTCAATAATCCAGAAAGAAATGCTACATTTGTTCCGATTTACTTGTAC
AATCTTATGATTTATAGATC

Downstream 100 bases:

>100_bases
AATTCGTTTGGATTTCTAGTATTTCTCATAAGAATAAAATATATTTGTACAATAGATATTTAAACGAACATAAAGTAAGT
AGTTACTATGATAGACCTAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MVKIKEGFKGERLVSLPEELLASYRREPLINNLYVRKIGFFPRVKYHFLQKEHGCDYAMLIYCTEGKGWYRILGKQYTVE
KYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMI
YSSMCLYNFLASFIYLEQFRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYF
IRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKKEMEI

Sequences:

>Translated_296_residues
MVKIKEGFKGERLVSLPEELLASYRREPLINNLYVRKIGFFPRVKYHFLQKEHGCDYAMLIYCTEGKGWYRILGKQYTVE
KYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMI
YSSMCLYNFLASFIYLEQFRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYF
IRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKKEMEI
>Mature_296_residues
MVKIKEGFKGERLVSLPEELLASYRREPLINNLYVRKIGFFPRVKYHFLQKEHGCDYAMLIYCTEGKGWYRILGKQYTVE
KYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMI
YSSMCLYNFLASFIYLEQFRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYF
IRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKKEMEI

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787987, Length=241, Percent_Identity=25.7261410788382, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35139; Mature: 35139

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIKEGFKGERLVSLPEELLASYRREPLINNLYVRKIGFFPRVKYHFLQKEHGCDYAML
CCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
IYCTEGKGWYRILGKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLP
EEEECCCCEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCC
SHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQFR
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYF
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEECCCCCCCHHHE
IRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKKEMEI
EEEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure
MVKIKEGFKGERLVSLPEELLASYRREPLINNLYVRKIGFFPRVKYHFLQKEHGCDYAML
CCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
IYCTEGKGWYRILGKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLP
EEEECCCCEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCC
SHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQFR
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYF
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEECCCCCCCHHHE
IRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKKEMEI
EEEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]