Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008253

Identifier: 150008253

GI number: 150008253

Start: 1905418

End: 1906998

Strand: Direct

Name: 150008253

Synonym: BDI_1622

Alternate gene names: NA

Gene position: 1905418-1906998 (Clockwise)

Preceding gene: 150008252

Following gene: 150008262

Centisome position: 39.6

GC content: 42.69

Gene sequence:

>1581_bases
ATGAAAAAAATATCAACAATTGCGGTTGCCTGTGCCGGGTTATTGAGCTTTACGGCTTGTAACAACTTTTTGGACGAAGA
GCCTAAGTCAACATTGACTGATGTCGCATACTATAAGACACAATCTCAAATGGAATCTAATGTAAACTATTTGTATCGTA
CGGGTGCGATCGGTAGTTATGTGGATTTCGGTAGTGCTTATATCGGGCCTTTCGCTTCTATTCAAGAAGAATTGACAGGA
TATTTCTCTAATTCTTATGAAGGACAGGAAATAGTTTGCCGTTATACCAGAGAATTGACCCGTCAACAAAACACGATGCA
GTTAGCATCTAAGATGGACAAGGTTTGGGATGACTGCTATCGCGGAATTAACGTGGCAAATGGAGCGATTAAGCATATGC
CAGAGGTACCTATGGATCAGGCTACTGCAGATCGCTTGACGGCTGAGGCTAAGTTTTTCCGTGCTTTCAACTATTTTTAC
TTAGTAAAGACTTTCGGAGCGGTTCCATTCTATACAGATCCCTATGAGCTGGCTGAGAACATGGAGCTTCCCCGTACGGA
AACCTCAACCATCTATAACCAAATCGAAAGCGATTTGAAGGATGCTATGAATGTATTGCCAGAGGCTACTTTCGCCGCTA
ATGGTCATCGTATCACGAAGTATGTGGCCGCTATGACGCTGACTGATGTTTATATGTATCAGCATAAATATGCAGAGGCT
GCTGAAACTGTGCGTATTGTCGTTAATTCAAATCATAAATTAACAACAAATGATGATTTGGCGATGAATAGCGCATTTAA
CAAATTGCGTTCTACAGATGACTTGGATGAGGCTATCTATGCCTATGAGTATGATAATCAGATTAGTCCGAGTAACTGGT
TACCTACTTATGCTTTTGATGGTGACGCTTCTAGTAACGGTTTGTTTGGAACATATGCCATCACCCAGAAAGTACATGGA
CCGAATGACCGTTATCTGAATATTTATGAATCAAACGATTTACGTCGTCAACCGAATCAGTTCTACCACTGGACTTATAC
AAATCCAAAAACTGGAAAGGTTTGGAATTCTGTAGGTAACGCTGCTTGTTGTTGGTATTATTACGATGAGGATGCCTTAC
TTACTACAGGTCGTGGCACAAAAGACTGGAACGTATATCGTTATGCTGAAGCTTTATTGGACGCTGCAGAGTCAATCGCT
CAATCAACTGGAGTGACTGCTGAAGCGGCCGGCTATTTGGCTCAAGTGAAGGCTCGTGCGAATATGGAAGGTAAAACCGC
TGCGGAGATTGCATCATCTTTACAAAGTATGGGTAAACAAGCCTTCATCGAAGAGTGTTGGACTGAGCGTCTACGTGAGT
TGCCTTTGGAATTTAAGATGTGGGATATGTGTGTACGTACAGGCATGTTCCCGAATATTTCCGAGACAACCCCGGGACAA
GTAACCTACATTCCGTTAGTGGGTGCTAAGAACGCATCTGGAGCAACAATCAAAGAATCCGACCTATTATGGCCGTTATC
CGTGAACGAGATCCAGCGTAACCCGAGTCTGACTCAGAATGAGGGATATTCTGCAAAGTAA

Upstream 100 bases:

>100_bases
GGGCAGAACATGACATTCTTCTCATATCCGAGAGCTAGGACATTTACATTTGGTGTTAATGTAACATTTTAATTAATCTC
ATTAAATTAGACATTAAAAA

Downstream 100 bases:

>100_bases
TATTTTTTATTTTAATAACTGATGGTTTTAAAGGGGAGGATGAGTTTTTCATTCTCCTCTTTTTCATTGTCCTCTCTTTT
CGATTTGTCTGGCGATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG
YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY
LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA
AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG
PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA
QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ
VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK

Sequences:

>Translated_526_residues
MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG
YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY
LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA
AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG
PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA
QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ
VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK
>Mature_526_residues
MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG
YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY
LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA
AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG
PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA
QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ
VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59264; Mature: 59264

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH
VDFGSAYIGPFASIQEELTGYFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCY
HHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFYLVKTFGAVPFYTDPYELAEN
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
MELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFD
HCEEEEEEECCCEECCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEC
GDASSNGLFGTYAITQKVHGPNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGN
CCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCC
AACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIAQSTGVTAEAAGYLAQVKARA
EEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
NMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK
EEEEEEEECCCCCCCEEECCCCEECCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH
VDFGSAYIGPFASIQEELTGYFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCY
HHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFYLVKTFGAVPFYTDPYELAEN
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
MELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFD
HCEEEEEEECCCEECCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEC
GDASSNGLFGTYAITQKVHGPNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGN
CCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCC
AACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIAQSTGVTAEAAGYLAQVKARA
EEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
NMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK
EEEEEEEECCCCCCCEEECCCCEECCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA