| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008165
Identifier: 150008165
GI number: 150008165
Start: 1795015
End: 1795740
Strand: Direct
Name: 150008165
Synonym: BDI_1531
Alternate gene names: NA
Gene position: 1795015-1795740 (Clockwise)
Preceding gene: 150008163
Following gene: 150008179
Centisome position: 37.31
GC content: 49.45
Gene sequence:
>726_bases ATGAGACTAAAATCATGTATGCTTATGTGTAGTTTATTCATGGCGAGCTTAGCCTCCGCTAGTAACTTCGCCTCGGATTC TTTCAAGACCAAGAGCGGAAAAGAACTGACCATCACGTTCATCAAGCACGGCAGCCTGATGCTTACGTACGACAATCATT CGATACAGGTAGATCCTGTCTCCGAATACGCCGATTATACGACTTTCCCGAAAGCCGATATCATCTTGATCACCCACGAG CATGGCGATCATCTGGACCCGAAAGCGATACAAGCTGTCGAGAAAAGCGATACGGAAATCATCGCCAACGAGAACAGCCA AAAGAAGCTGGGAAAAGGGAAGGTCCTGAAAAACGGCGATACGGATACCTCCATCAGCTATATGAAGATAGAGGCCGTCC CCGCCTATAACACCACACCCGGACGGGATAAATATCACCCCCGCCACCGGGATAATGGCTATATCCTCACGTTCGACGGA CTAAGAGTCTATATAGCCGGCGATACGGAAGACATCCCGGAGATGAAAGACCTGAAAGACATCGATATCGCTTTCCTTCC CGTCAACCAGCCTTATACCATGACCGTCTCGCAAGCGGCGAAAGCGGCCCGGATGTTCTCGCCTAAAATCTTATACCCTT ACCATTACGGGGATACGAAGATCGGCGAGTTGAAAGATGCCTTGAAAGATAGCGGCATCGACGTCAGGATACGGGAGCTA CAATGA
Upstream 100 bases:
>100_bases CGTCGCAAATGTAAATATTTATACCGGATAGGCGAACAAATTAGGGAATTAATCTATTATGAGTATATTTGCGGAAACAC TTATAAAAAACCGCGAGATT
Downstream 100 bases:
>100_bases CGACAAGGCACGGCTAGCCTTTAAGATATTCCGCCGGTACACCCAGCAAGCCAAGAGGAAATAAACGGCACATTGCACCC ACAACGTCACGTACTCCACA
Product: putative metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRLKSCMLMCSLFMASLASASNFASDSFKTKSGKELTITFIKHGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHE HGDHLDPKAIQAVEKSDTEIIANENSQKKLGKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDG LRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVRIREL Q
Sequences:
>Translated_241_residues MRLKSCMLMCSLFMASLASASNFASDSFKTKSGKELTITFIKHGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHE HGDHLDPKAIQAVEKSDTEIIANENSQKKLGKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDG LRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVRIREL Q >Mature_241_residues MRLKSCMLMCSLFMASLASASNFASDSFKTKSGKELTITFIKHGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHE HGDHLDPKAIQAVEKSDTEIIANENSQKKLGKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDG LRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVRIREL Q
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 27022; Mature: 27022
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKSCMLMCSLFMASLASASNFASDSFKTKSGKELTITFIKHGSLMLTYDNHSIQVDPV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEECCH SEYADYTTFPKADIILITHEHGDHLDPKAIQAVEKSDTEIIANENSQKKLGKGKVLKNGD HHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCHHHCCCCCEEECCC TDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLKD CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCC IDIAFLPVNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVRIREL CCEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC Q C >Mature Secondary Structure MRLKSCMLMCSLFMASLASASNFASDSFKTKSGKELTITFIKHGSLMLTYDNHSIQVDPV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEECCH SEYADYTTFPKADIILITHEHGDHLDPKAIQAVEKSDTEIIANENSQKKLGKGKVLKNGD HHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCHHHCCCCCEEECCC TDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLKD CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCC IDIAFLPVNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVRIREL CCEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA