| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008072
Identifier: 150008072
GI number: 150008072
Start: 1665785
End: 1667782
Strand: Direct
Name: 150008072
Synonym: BDI_1436
Alternate gene names: NA
Gene position: 1665785-1667782 (Clockwise)
Preceding gene: 150008071
Following gene: 150008073
Centisome position: 34.62
GC content: 53.8
Gene sequence:
>1998_bases GTGAAACCAGAAAATGAAGAAAAGGTAACCGGGCTGCCAGAAAACGCCTACCGAGAATTAAAAGAAGGGGAAAGCTACAA GCCTCTTATGTCTCCCAACAAACACTATCCGGAGGTTACGCCTTGGTCCGTCCTTTGGGGATTGGTCATGGCAGTGATAT TCAGCGCGGCGGCCGCTTATCTGGGCCTGAAGGTCGGTCAAGTATTCGAGGCCGCCATCCCGATCGCTATCATCGCCGTA GGGTTGTCCAGCGGATTCAAGCGGAAGAACGCCTTGGGAGAGAACGTCATCATCCAGTCTATCGGGGCCAGTAGCGGCGT GATCGTGGCGGGGGCCATTTTCACCTTGCCCGCCCTTTATATCCTGCAAGACAAATATCCGGAGATCACGGTCAATTTCT TCGAGGTTTTCATGAGTTCCTTGTTAGGAGGTATCATCGGGATCTTGCTCTTGATTCCGTTCCGTAAATATTTCGTATCC GACATGCACGGTAAGTATCCCTTCCCGGAAGCTACGGCTACCACGCAAGTACTCGTCTCCGGCGAGAAAGGCGGAAGCCA AGCGAAGCCCTTGATCTTCGCCGGATTAATCGGAGGTTTGTACGACTTCATCATCGCCACCTTCGGTTGGTGGGGCGAGA CGATCAGTACCCGTATCGTCGGGGCCGGCGAGATGCTGGCGGAGAAAGCCAAGATCGTGTTGAAAGTCAATACGGGCGCA GCCGTGCTAGGTCTGGGTTACATCATCGGATTAAAATACTCCTTGATCATCTGCGCCGGTTCATTCTTGGTATGGTTGGT GATCATCCCCGCCATGTCCGCCATTTTCAGCGCCGACGTGCTTACGTTCGGCAATGACGCTATCACGGCGACCGTCGGGA GCATGAGCGCCGAGCAAATCTTCACCACCTACGCCCGCCACATCGGTATCGGAGGTATCGCTACCGCCGGGGTGATCGGC ATCATCAACTCTTGGGGAATCATCAAGGGAGCCGTAGGCTTGGCGGCGAACGAGTTGAAAGGAAAAGGAGACGCTGTGGA GAGTAATACTATACGTACGCAAAAGGATTTGTCGATGAAAGTGATAACGATCGGTATCATCGTATCGCTGATTGTCACCT TCCTGTTCTTCCAGTTCGGCGTACTTCATAATTGGTTCCATGCTGCCATCGGCTTATTGCTGGTCGGGGTGATCGCTTTC CTGTTTACGACCGTAGCGGCAAACGCTATCGCTATCGTAGGGACGAACCCGGTATCGGGCATGACGCTCATGACGTTGAT CCTCGCCTCCATCATCTTGGTCGCCGTAGGGTTGAAAGGGCCGGCCGGCATGGTATCCGCCCTGATTATCGGAGGCGTGG TTTGTACGGCGCTTTCCATGGCGGGAGGTTTCATTACCGACTTGAAAATTGGCTACTGGCTGGGTAGTACGCCCGCCAAG CAAGAGACTTGGAAATTCCTAGGCACACTAGTTTCCGCCGCTACGGTAGGAGGCGTGATCTTGATATTGAACCAGACGTA CGGTTTCACGACCGGACAATTGGCCGCTCCGCAAGCGAACGCTATGGCCGCCGTTATCGAGCCGTTGATGAGTGGCTCGG GGGCACCTTGGGCTTTATACGCGATTGGAGCCGTCCTCGCCGTCGTATTGAACTTCTGCAAGATACCAGCGTTGGCATTC GCCTTGGGTATGTTTATCCCTTTGGACCTGAATACGCCGCTTTTGATCGGTGGAGCGATCAGTTGGTACGTGGGAAGCCG TAGCAAAGACCAAAGCTTGAACTCAGCCCGCTTGGAGAAAGGTACGTTACTGGCTTCCGGCTTTATCGCCGGCGGTGCCT TGATGGGCGTGGTTAGCGCGGCCTTACGTTTCGGCGGAATCAACTTGATGAACGAGGAATGGGCATCTAGCAATGCCGCC GAGATACTGGCGGTTGTCATGTACCTTGTCATGATCGCTTACCTCACATTTAATTCCCTGAACGCGAAAAAAGAATAG
Upstream 100 bases:
>100_bases CTAAAGAATCCTTGCATGTCTCAGCCAGAAAACATAAATTTGTCACCCAACACCCGTTTGGTGGAGCTATTACGAACTTA TAATCTAACATTTTAATATC
Downstream 100 bases:
>100_bases AATAAAGGAATAAGGATATGGAAGCACCTGTAATCAATGTGGGAATCATGACCCACAAAGCAATCTCATTTGTTTTTAAC GAGGAGTATGTACATACGGA
Product: putative oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MKPENEEKVTGLPENAYRELKEGESYKPLMSPNKHYPEVTPWSVLWGLVMAVIFSAAAAYLGLKVGQVFEAAIPIAIIAV GLSSGFKRKNALGENVIIQSIGASSGVIVAGAIFTLPALYILQDKYPEITVNFFEVFMSSLLGGIIGILLLIPFRKYFVS DMHGKYPFPEATATTQVLVSGEKGGSQAKPLIFAGLIGGLYDFIIATFGWWGETISTRIVGAGEMLAEKAKIVLKVNTGA AVLGLGYIIGLKYSLIICAGSFLVWLVIIPAMSAIFSADVLTFGNDAITATVGSMSAEQIFTTYARHIGIGGIATAGVIG IINSWGIIKGAVGLAANELKGKGDAVESNTIRTQKDLSMKVITIGIIVSLIVTFLFFQFGVLHNWFHAAIGLLLVGVIAF LFTTVAANAIAIVGTNPVSGMTLMTLILASIILVAVGLKGPAGMVSALIIGGVVCTALSMAGGFITDLKIGYWLGSTPAK QETWKFLGTLVSAATVGGVILILNQTYGFTTGQLAAPQANAMAAVIEPLMSGSGAPWALYAIGAVLAVVLNFCKIPALAF ALGMFIPLDLNTPLLIGGAISWYVGSRSKDQSLNSARLEKGTLLASGFIAGGALMGVVSAALRFGGINLMNEEWASSNAA EILAVVMYLVMIAYLTFNSLNAKKE
Sequences:
>Translated_665_residues MKPENEEKVTGLPENAYRELKEGESYKPLMSPNKHYPEVTPWSVLWGLVMAVIFSAAAAYLGLKVGQVFEAAIPIAIIAV GLSSGFKRKNALGENVIIQSIGASSGVIVAGAIFTLPALYILQDKYPEITVNFFEVFMSSLLGGIIGILLLIPFRKYFVS DMHGKYPFPEATATTQVLVSGEKGGSQAKPLIFAGLIGGLYDFIIATFGWWGETISTRIVGAGEMLAEKAKIVLKVNTGA AVLGLGYIIGLKYSLIICAGSFLVWLVIIPAMSAIFSADVLTFGNDAITATVGSMSAEQIFTTYARHIGIGGIATAGVIG IINSWGIIKGAVGLAANELKGKGDAVESNTIRTQKDLSMKVITIGIIVSLIVTFLFFQFGVLHNWFHAAIGLLLVGVIAF LFTTVAANAIAIVGTNPVSGMTLMTLILASIILVAVGLKGPAGMVSALIIGGVVCTALSMAGGFITDLKIGYWLGSTPAK QETWKFLGTLVSAATVGGVILILNQTYGFTTGQLAAPQANAMAAVIEPLMSGSGAPWALYAIGAVLAVVLNFCKIPALAF ALGMFIPLDLNTPLLIGGAISWYVGSRSKDQSLNSARLEKGTLLASGFIAGGALMGVVSAALRFGGINLMNEEWASSNAA EILAVVMYLVMIAYLTFNSLNAKKE >Mature_665_residues MKPENEEKVTGLPENAYRELKEGESYKPLMSPNKHYPEVTPWSVLWGLVMAVIFSAAAAYLGLKVGQVFEAAIPIAIIAV GLSSGFKRKNALGENVIIQSIGASSGVIVAGAIFTLPALYILQDKYPEITVNFFEVFMSSLLGGIIGILLLIPFRKYFVS DMHGKYPFPEATATTQVLVSGEKGGSQAKPLIFAGLIGGLYDFIIATFGWWGETISTRIVGAGEMLAEKAKIVLKVNTGA AVLGLGYIIGLKYSLIICAGSFLVWLVIIPAMSAIFSADVLTFGNDAITATVGSMSAEQIFTTYARHIGIGGIATAGVIG IINSWGIIKGAVGLAANELKGKGDAVESNTIRTQKDLSMKVITIGIIVSLIVTFLFFQFGVLHNWFHAAIGLLLVGVIAF LFTTVAANAIAIVGTNPVSGMTLMTLILASIILVAVGLKGPAGMVSALIIGGVVCTALSMAGGFITDLKIGYWLGSTPAK QETWKFLGTLVSAATVGGVILILNQTYGFTTGQLAAPQANAMAAVIEPLMSGSGAPWALYAIGAVLAVVLNFCKIPALAF ALGMFIPLDLNTPLLIGGAISWYVGSRSKDQSLNSARLEKGTLLASGFIAGGALMGVVSAALRFGGINLMNEEWASSNAA EILAVVMYLVMIAYLTFNSLNAKKE
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 69719; Mature: 69719
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPENEEKVTGLPENAYRELKEGESYKPLMSPNKHYPEVTPWSVLWGLVMAVIFSAAAAY CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGLKVGQVFEAAIPIAIIAVGLSSGFKRKNALGENVIIQSIGASSGVIVAGAIFTLPALY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHEECCCCCCEEEEHHHHHHHHHH ILQDKYPEITVNFFEVFMSSLLGGIIGILLLIPFRKYFVSDMHGKYPFPEATATTQVLVS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE GEKGGSQAKPLIFAGLIGGLYDFIIATFGWWGETISTRIVGAGEMLAEKAKIVLKVNTGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCEEEEEECCCC AVLGLGYIIGLKYSLIICAGSFLVWLVIIPAMSAIFSADVLTFGNDAITATVGSMSAEQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH FTTYARHIGIGGIATAGVIGIINSWGIIKGAVGLAANELKGKGDAVESNTIRTQKDLSMK HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHH VITIGIIVSLIVTFLFFQFGVLHNWFHAAIGLLLVGVIAFLFTTVAANAIAIVGTNPVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH MTLMTLILASIILVAVGLKGPAGMVSALIIGGVVCTALSMAGGFITDLKIGYWLGSTPAK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCH QETWKFLGTLVSAATVGGVILILNQTYGFTTGQLAAPQANAMAAVIEPLMSGSGAPWALY HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH AIGAVLAVVLNFCKIPALAFALGMFIPLDLNTPLLIGGAISWYVGSRSKDQSLNSARLEK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHCCCCCCCCCCHHHHHHC GTLLASGFIAGGALMGVVSAALRFGGINLMNEEWASSNAAEILAVVMYLVMIAYLTFNSL CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCC NAKKE CCCCC >Mature Secondary Structure MKPENEEKVTGLPENAYRELKEGESYKPLMSPNKHYPEVTPWSVLWGLVMAVIFSAAAAY CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGLKVGQVFEAAIPIAIIAVGLSSGFKRKNALGENVIIQSIGASSGVIVAGAIFTLPALY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHEECCCCCCEEEEHHHHHHHHHH ILQDKYPEITVNFFEVFMSSLLGGIIGILLLIPFRKYFVSDMHGKYPFPEATATTQVLVS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE GEKGGSQAKPLIFAGLIGGLYDFIIATFGWWGETISTRIVGAGEMLAEKAKIVLKVNTGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCEEEEEECCCC AVLGLGYIIGLKYSLIICAGSFLVWLVIIPAMSAIFSADVLTFGNDAITATVGSMSAEQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH FTTYARHIGIGGIATAGVIGIINSWGIIKGAVGLAANELKGKGDAVESNTIRTQKDLSMK HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHH VITIGIIVSLIVTFLFFQFGVLHNWFHAAIGLLLVGVIAFLFTTVAANAIAIVGTNPVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH MTLMTLILASIILVAVGLKGPAGMVSALIIGGVVCTALSMAGGFITDLKIGYWLGSTPAK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCH QETWKFLGTLVSAATVGGVILILNQTYGFTTGQLAAPQANAMAAVIEPLMSGSGAPWALY HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH AIGAVLAVVLNFCKIPALAFALGMFIPLDLNTPLLIGGAISWYVGSRSKDQSLNSARLEK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHCCCCCCCCCCHHHHHHC GTLLASGFIAGGALMGVVSAALRFGGINLMNEEWASSNAAEILAVVMYLVMIAYLTFNSL CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCC NAKKE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]