| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008073
Identifier: 150008073
GI number: 150008073
Start: 1667800
End: 1669113
Strand: Direct
Name: 150008073
Synonym: BDI_1437
Alternate gene names: NA
Gene position: 1667800-1669113 (Clockwise)
Preceding gene: 150008072
Following gene: 150008074
Centisome position: 34.66
GC content: 52.05
Gene sequence:
>1314_bases ATGGAAGCACCTGTAATCAATGTGGGAATCATGACCCACAAAGCAATCTCATTTGTTTTTAACGAGGAGTATGTACATAC GGAAACCGGCACGTTCACCATAGGCGAGCAACGTGCCCTCTGGGTAAACGGCAAGATCGTGTACAATGGGAAGCTTTATC AGGAGCTATTCTTCGAGCCGACCAGCCCGCAATCCTCTTTCGACTTGAAGGCGGTCACGATCGGCGTGGATTTTCACTGG CAACGACAGGAGGATCAACGCTTCAAGGGAGCGTTGAACCTCGTGGCGACCGATAAAGGTATCGTCACGATCAACCAAGT GGACGTGGAGGAATACCTTACCAGCGTAATCTCCTCGGAGATGAGCGCCAACGCTTCCAAAGAGTTGCTGAAAGCCCATG CCGTGATCTCGCGAAGCTGGCTCTTGGCGCAGGTCGAGAAGAATTTCAACTTGAACGGATCGGTTACGCCCTATAAAAGT TGTTACCGCGACAGCGAGACCTTGATCCGCTGGTACGACCGGGAGGACCATGATCTGTTCGATGTCTGTGCCGACGACCA TTGCCAGCGTTACCAAGGTATTACCCGGGCATCGAACCCGATAGTCAGGGAGGTGATCAAAGAGACACGTGGAGAGGTAT TGATGGATAACGATACGATCTGCGACGCCCGCTTCTCGAAATGCTGCGGAGGCGTGACCGAGAAATTCGAGAATTGCTGG GAACCGGTTCCCCACTCCTATCTTACCGCCTTGAGGGATGACGAGATTCCCTCCTATCCCGACTTGACGGACGAGCGGGA AGCGGAACAATGGATACGTACCTCACCCGAAGCCTTCTGTAATACAACGGACAAGGAGATCCTTAGCCAAGTGCTAAACA ACTACGATCAAGAGACCACGGATTTCTACCGTTGGAAGGTAGAATATACGCAGGAGGAACTATCAAGGTTGATCCACCGG AAAACGGGTATGGATTTCGGGCCGATCATCGATCTCATACCGTTGGAAAGAGGTTCGTCCGGACGCATCACGAAACTCAA GATCGTAGGGGTACGCCGTTCGTTCACCATCGGCAAAGAGCTTGAGATACGCCGGACATTATCCGAGACGCATCTATACA GCTCGGCCTTTGTTGTCGATAAGAAGGATATCCGCCTTGATATCCCCTCCCGCTTCATCTTGACAGGAGCCGGATGGGGA CATGGCGTAGGGCTTTGCCAGATCGGAGCCGCCGTGATGGGAGCCAAAGGATATTCGTACCGGAAAATCCTCACGCATTA TTTCCCCGGAGCCTCTATTGAGAAAAGGTATTAA
Upstream 100 bases:
>100_bases CCGCCGAGATACTGGCGGTTGTCATGTACCTTGTCATGATCGCTTACCTCACATTTAATTCCCTGAACGCGAAAAAAGAA TAGAATAAAGGAATAAGGAT
Downstream 100 bases:
>100_bases ACAAGGGTGTCCAGATTTTGGACACCCTTGTCCAATTATTGGACACTCATAAACAATCGTACGCCACTCATCCCTCTGTT TTTCAACCACATAAACACAA
Product: hypothetical protein
Products: NA
Alternate protein names: SpoIID/LytB Domain Protein; SpoIID/LytB Domain-Containing Protein; Sporulation Protein SpoIID-Related Protein; Stage II Sporulation Protein D; Stage II Sporulation-Related Protein; Stage II Sporulation Protein; Sporulation Stage II Protein D; Group 2 Family Glycosyltransferase; Sporulation Related Protein; SpoIID-Like Protein; Amidase Enhancer-Like; Sporulation Protein-Like Protein; SpoIID Sporulation Protein; Glycosyl Transferase Group 2 Family; Sporulation Protein SpoIID; Spoiid/Lytb Domain Protein; Sporulation Protein And Related Proteins-Like; Sporulation Protein Spoiid; Lipoprotein
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY
Sequences:
>Translated_437_residues MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY >Mature_437_residues MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY
Specific function: Unknown
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49973; Mature: 49973
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEP CCCCEEEEEEHHHHHHHEEECCCEEEECCCEEEECCCEEEEECCEEEECCHHHHHHHCCC TSPQSSFDLKAVTIGVDFHWQRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSE CCCCCCCCEEEEEEEEEEEECCCHHHHHHHHEEEEEECCCEEEEEECCHHHHHHHHHHHH MSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKSCYRDSETLIRWYDREDHDLF HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEECCCCCCCHH DVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHC EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETT CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCC DFYRWKVEYTQEELSRLIHRKTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKE CEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCH LEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWGHGVGLCQIGAAVMGAKGYSY HHHHHHHHHHHHHHEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHH RKILTHYFPGASIEKRY HHHHHHHCCCCCCCCCC >Mature Secondary Structure MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEP CCCCEEEEEEHHHHHHHEEECCCEEEECCCEEEECCCEEEEECCEEEECCHHHHHHHCCC TSPQSSFDLKAVTIGVDFHWQRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSE CCCCCCCCEEEEEEEEEEEECCCHHHHHHHHEEEEEECCCEEEEEECCHHHHHHHHHHHH MSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKSCYRDSETLIRWYDREDHDLF HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEECCCCCCCHH DVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHC EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETT CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCC DFYRWKVEYTQEELSRLIHRKTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKE CEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCH LEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWGHGVGLCQIGAAVMGAKGYSY HHHHHHHHHHHHHHEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHH RKILTHYFPGASIEKRY HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA